RNA–Protein interactions for RNA: ENST00000360093.7

SCN3A-202, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN3A, Length 9,123 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-202ENST00000360093 KLK9Q9UKQ9 250 aa3.81□□□□□ -1.8
SCN3A-202ENST00000360093 TRAV8-2A0A0B4J237 113 aa3.81□□□□□ -1.8
SCN3A-202ENST00000360093 TMEM213A2RRL7 107 aa3.81□□□□□ -1.8
SCN3A-202ENST00000360093 SMIM2Q9BVW6 85 aa3.81□□□□□ -1.8
SCN3A-202ENST00000360093 C16orf74Q96GX8 76 aa3.81□□□□□ -1.8
SCN3A-202ENST00000360093 SELENOKQ9Y6D0 94 aa3.81□□□□□ -1.8
SCN3A-202ENST00000360093 C4orf3Q8WVX3 66 aa3.8□□□□□ -1.8
SCN3A-202ENST00000360093 DLX4Q92988 240 aaPredicted RBP3.8□□□□□ -1.8
SCN3A-202ENST00000360093 BUB3O43684 328 aa3.8□□□□□ -1.8
SCN3A-202ENST00000360093 ZNRF2Q8NHG8 242 aa3.8□□□□□ -1.8
SCN3A-202ENST00000360093 C20orf144Q9BQM9 153 aa3.8□□□□□ -1.8
SCN3A-202ENST00000360093 SIRPDQ9H106 197 aa3.8□□□□□ -1.8
SCN3A-202ENST00000360093 KLF12Q9Y4X4 402 aa3.8□□□□□ -1.8
SCN3A-202ENST00000360093 WI2-2373I1.2A0A1W2PRP0 233 aa3.8□□□□□ -1.8
SCN3A-202ENST00000360093 GAGE12JA6NER3 117 aa3.8□□□□□ -1.8
SCN3A-202ENST00000360093 MYCNOSP40205 109 aa3.8□□□□□ -1.8
SCN3A-202ENST00000360093 GAGE1Q13065 139 aa3.8□□□□□ -1.8
SCN3A-202ENST00000360093 GAGE4Q13068 117 aa3.8□□□□□ -1.8
SCN3A-202ENST00000360093 GAGE5Q13069 117 aa3.8□□□□□ -1.8
SCN3A-202ENST00000360093 BDP1A6H8Y1 2624 aa3.8□□□□□ -1.8
SCN3A-202ENST00000360093 GAGE12BA1L429 117 aa3.8□□□□□ -1.8
SCN3A-202ENST00000360093 C9JQL5 133 aa3.8□□□□□ -1.8
SCN3A-202ENST00000360093 GAGE7O76087 117 aa3.8□□□□□ -1.8
SCN3A-202ENST00000360093 GAGE12FP0CL80 117 aa3.8□□□□□ -1.8
SCN3A-202ENST00000360093 GAGE12GP0CL81 117 aa3.8□□□□□ -1.8
SCN3A-202ENST00000360093 GAGE12IP0CL82 117 aa3.8□□□□□ -1.8
SCN3A-202ENST00000360093 TRAV12-2A0A075B6T6 113 aa3.8□□□□□ -1.8
SCN3A-202ENST00000360093 HLA-DRB4P13762 266 aa3.8□□□□□ -1.8
SCN3A-202ENST00000360093 MEGF9Q9H1U4 602 aa3.8□□□□□ -1.8
SCN3A-202ENST00000360093 HLA-DRB4X5D2U9 266 aa3.8□□□□□ -1.8
SCN3A-202ENST00000360093 F8VRH5 84 aa3.8□□□□□ -1.8
SCN3A-202ENST00000360093 TNFRSF13BO14836 293 aaPredicted RBP3.8□□□□□ -1.8
SCN3A-202ENST00000360093 CTSGP08311 255 aa3.8□□□□□ -1.8
SCN3A-202ENST00000360093 RIPPLY3P57055 190 aa3.8□□□□□ -1.8
SCN3A-202ENST00000360093 KNCNA6PVL3 124 aa3.8□□□□□ -1.8
SCN3A-202ENST00000360093 F8WEM9 126 aa3.8□□□□□ -1.8
SCN3A-202ENST00000360093 ODF3L1Q8IXM7 274 aa3.8□□□□□ -1.8
SCN3A-202ENST00000360093 TRBV20-1A0A075B6N2 111 aa3.79□□□□□ -1.8
SCN3A-202ENST00000360093 TRAV8-4A0A0B4J246 113 aa3.79□□□□□ -1.8
SCN3A-202ENST00000360093 hDV102S1A0JD36 115 aa3.79□□□□□ -1.8
SCN3A-202ENST00000360093 IGLV2-23P01705 113 aa3.79□□□□□ -1.8
SCN3A-202ENST00000360093 DAZ2Q13117 558 aaKnown RBP3.79□□□□□ -1.8
SCN3A-202ENST00000360093 DAZ4Q86SG3 579 aaKnown RBP3.79□□□□□ -1.8
SCN3A-202ENST00000360093 DYNAPQ8N1N2 210 aa3.79□□□□□ -1.8
SCN3A-202ENST00000360093 GATD1Q8NB37 220 aa3.79□□□□□ -1.8
SCN3A-202ENST00000360093 DAZ3Q9NR90 486 aaKnown RBP3.79□□□□□ -1.8
SCN3A-202ENST00000360093 TRBV6-1A0A0K0K1D8 114 aa3.79□□□□□ -1.8
SCN3A-202ENST00000360093 A0A1B0GV72 72 aa3.79□□□□□ -1.8
SCN3A-202ENST00000360093 CD5LO43866 347 aa3.79□□□□□ -1.8
SCN3A-202ENST00000360093 MED14OSP0DP75 135 aa3.79□□□□□ -1.8
SCN3A-202ENST00000360093 AJUBAQ96IF1 538 aa3.79□□□□□ -1.8
SCN3A-202ENST00000360093 AGPAT4-IT1Q9H0P7 198 aa3.79□□□□□ -1.8
SCN3A-202ENST00000360093 ACACBO00763 2458 aa3.79□□□□□ -1.8
SCN3A-202ENST00000360093 C10orf142B7Z368 130 aa3.79□□□□□ -1.8
SCN3A-202ENST00000360093 GP9P14770 177 aa3.79□□□□□ -1.8
SCN3A-202ENST00000360093 Q8N7P7 452 aa3.79□□□□□ -1.8
SCN3A-202ENST00000360093 IGKV1-17P01599 117 aa3.79□□□□□ -1.8
SCN3A-202ENST00000360093 KLF5Q13887 457 aaPredicted RBP3.79□□□□□ -1.8
SCN3A-202ENST00000360093 LINC01545Q5VT33 79 aa3.79□□□□□ -1.8
SCN3A-202ENST00000360093 C11orf68Q9H3H3 251 aaKnown RBP3.79□□□□□ -1.8
SCN3A-202ENST00000360093 SIGLEC8Q9NYZ4 499 aa3.79□□□□□ -1.8
SCN3A-202ENST00000360093 C9orf47Q6ZRZ4 202 aa3.79□□□□□ -1.8
SCN3A-202ENST00000360093 A0A087X0K7 114 aa3.79□□□□□ -1.8
SCN3A-202ENST00000360093 A0A0U1RRA0 63 aa3.79□□□□□ -1.8
SCN3A-202ENST00000360093 TEX22C9J3V5 150 aa3.79□□□□□ -1.8
SCN3A-202ENST00000360093 PRB1P04280 392 aa3.79□□□□□ -1.8
SCN3A-202ENST00000360093 EGR2P11161 476 aaPredicted RBP3.79□□□□□ -1.8
SCN3A-202ENST00000360093 SPANXA1Q9NS26 97 aa3.79□□□□□ -1.8
SCN3A-202ENST00000360093 ZFP36P26651 326 aaKnown RBP3.79□□□□□ -1.8
SCN3A-202ENST00000360093 BLCAPP62952 87 aa3.79□□□□□ -1.8
SCN3A-202ENST00000360093 CLPSL1A2RUU4 121 aa3.79□□□□□ -1.8
SCN3A-202ENST00000360093 SIVA1O15304 175 aa3.79□□□□□ -1.8
SCN3A-202ENST00000360093 CDK2AP2O75956 126 aa3.79□□□□□ -1.8
SCN3A-202ENST00000360093 TAL2Q16559 108 aa3.79□□□□□ -1.8
SCN3A-202ENST00000360093 SPART-AS1P0CW21 52 aa3.78□□□□□ -1.8
SCN3A-202ENST00000360093 PYY3Q5JQD4 70 aa3.78□□□□□ -1.8
SCN3A-202ENST00000360093 C2orf70A6NJV1 201 aa3.78□□□□□ -1.8
SCN3A-202ENST00000360093 IGLV2-14P01704 120 aa3.78□□□□□ -1.8
SCN3A-202ENST00000360093 PRB4P10163 310 aaPredicted RBP3.78□□□□□ -1.8
SCN3A-202ENST00000360093 Q71RC1 249 aaPredicted RBP3.78□□□□□ -1.8
SCN3A-202ENST00000360093 U3KQE9 123 aa3.78□□□□□ -1.8
SCN3A-202ENST00000360093 ATG2AQ2TAZ0 1938 aa3.78□□□□□ -1.8
SCN3A-202ENST00000360093 CPAMD8Q8IZJ3 1885 aa3.78□□□□□ -1.8
SCN3A-202ENST00000360093 IGHV3-16A0A0C4DH30 117 aa3.78□□□□□ -1.8
SCN3A-202ENST00000360093 A6NDX4 124 aa3.78□□□□□ -1.8
SCN3A-202ENST00000360093 SPANXDQ9BXN6 97 aa3.78□□□□□ -1.8
SCN3A-202ENST00000360093 LAMTOR3Q9UHA4 124 aa3.78□□□□□ -1.8
SCN3A-202ENST00000360093 TRAV13-2A0A0B4J235 113 aa3.78□□□□□ -1.8
SCN3A-202ENST00000360093 CFHR3Q02985 330 aa3.78□□□□□ -1.8
SCN3A-202ENST00000360093 RITA1Q96K30 269 aa3.78□□□□□ -1.8
SCN3A-202ENST00000360093 NOP10Q9NPE3 64 aaKnown RBP3.78□□□□□ -1.8
SCN3A-202ENST00000360093 ODF3BA8MYP8 253 aa3.78□□□□□ -1.81
SCN3A-202ENST00000360093 SLURP1P55000 103 aa3.78□□□□□ -1.81
SCN3A-202ENST00000360093 HERV-K104P63124 156 aa3.78□□□□□ -1.81
SCN3A-202ENST00000360093 KIR3DS1Q14943 382 aa3.78□□□□□ -1.81
SCN3A-202ENST00000360093 MRPL23Q16540 153 aaKnown RBP3.78□□□□□ -1.81
SCN3A-202ENST00000360093 C2orf82Q6UX34 121 aa3.78□□□□□ -1.81
SCN3A-202ENST00000360093 IGF2BP2-AS1Q96M15 143 aa3.78□□□□□ -1.81
SCN3A-202ENST00000360093 H3BMM0 161 aa3.77□□□□□ -1.81
SCN3A-202ENST00000360093 NKAPP1Q8N9T2 125 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms