RNA–Protein interactions for RNA: ENST00000359785.9

PTPN22-201, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PTPN22, Length 3,654 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-201ENST00000359785 AAMDCQ9H7C9 122 aa3.4□□□□□ -1.87
PTPN22-201ENST00000359785 TMEM89A2RUT3 159 aa3.39□□□□□ -1.87
PTPN22-201ENST00000359785 NDUFA7O95182 113 aa3.39□□□□□ -1.87
PTPN22-201ENST00000359785 CCL4P13236 92 aa3.39□□□□□ -1.87
PTPN22-201ENST00000359785 MAGEA5P43359 124 aa3.39□□□□□ -1.87
PTPN22-201ENST00000359785 SUMO2P61956 95 aaKnown RBP3.39□□□□□ -1.87
PTPN22-201ENST00000359785 Q6JHZ5 121 aa3.39□□□□□ -1.87
PTPN22-201ENST00000359785 C9orf139Q6ZV77 190 aa3.39□□□□□ -1.87
PTPN22-201ENST00000359785 GOLT1AQ6ZVE7 132 aa3.39□□□□□ -1.87
PTPN22-201ENST00000359785 SEM1Q6ZVN7 128 aa3.39□□□□□ -1.87
PTPN22-201ENST00000359785 Q8N1Y9 231 aa3.39□□□□□ -1.87
PTPN22-201ENST00000359785 LINC00477Q96M19 166 aa3.39□□□□□ -1.87
PTPN22-201ENST00000359785 IGLV5-39A0A0G2JS06 123 aa3.39□□□□□ -1.87
PTPN22-201ENST00000359785 J3KT08 172 aa3.39□□□□□ -1.87
PTPN22-201ENST00000359785 KLK10O43240 276 aa3.39□□□□□ -1.87
PTPN22-201ENST00000359785 LINC00205P59089 165 aa3.39□□□□□ -1.87
PTPN22-201ENST00000359785 EDDM3AQ14507 147 aa3.39□□□□□ -1.87
PTPN22-201ENST00000359785 SH2D6Q7Z4S9 175 aa3.39□□□□□ -1.87
PTPN22-201ENST00000359785 DEFB119Q8N690 84 aa3.39□□□□□ -1.87
PTPN22-201ENST00000359785 COPS9Q8WXC6 57 aa3.39□□□□□ -1.87
PTPN22-201ENST00000359785 C8orf49Q96NF6 230 aa3.39□□□□□ -1.87
PTPN22-201ENST00000359785 PRSS29PA6NIE9 313 aa3.39□□□□□ -1.87
PTPN22-201ENST00000359785 PATE3B3GLJ2 98 aa3.39□□□□□ -1.87
PTPN22-201ENST00000359785 K7ERJ3 54 aa3.39□□□□□ -1.87
PTPN22-201ENST00000359785 TIMM8AO60220 97 aaPredicted RBP3.39□□□□□ -1.87
PTPN22-201ENST00000359785 ORM1P02763 201 aa3.39□□□□□ -1.87
PTPN22-201ENST00000359785 TIRAPP58753 221 aa3.39□□□□□ -1.87
PTPN22-201ENST00000359785 SPINK9Q5DT21 86 aa3.39□□□□□ -1.87
PTPN22-201ENST00000359785 C1orf158Q8N1D5 194 aa3.39□□□□□ -1.87
PTPN22-201ENST00000359785 HILPDAQ9Y5L2 63 aa3.39□□□□□ -1.87
PTPN22-201ENST00000359785 USF3Q68DE3 2245 aa3.38□□□□□ -1.87
PTPN22-201ENST00000359785 A0A096LPE4 126 aa3.38□□□□□ -1.87
PTPN22-201ENST00000359785 A0A1W2PPZ6 126 aa3.38□□□□□ -1.87
PTPN22-201ENST00000359785 FAM90A27PA6NNH2 459 aa3.38□□□□□ -1.87
PTPN22-201ENST00000359785 COX7CP15954 63 aa3.38□□□□□ -1.87
PTPN22-201ENST00000359785 GAGE2BQ13066 116 aa3.38□□□□□ -1.87
PTPN22-201ENST00000359785 MIAQ16674 131 aa3.38□□□□□ -1.87
PTPN22-201ENST00000359785 GAGE2EQ4V326 116 aa3.38□□□□□ -1.87
PTPN22-201ENST00000359785 HCP5Q6MZN7 132 aa3.38□□□□□ -1.87
PTPN22-201ENST00000359785 TMEM101Q96IK0 257 aa3.38□□□□□ -1.87
PTPN22-201ENST00000359785 YAE1D1Q9NRH1 226 aa3.38□□□□□ -1.87
PTPN22-201ENST00000359785 GAGE2DQ9UEU5 116 aa3.38□□□□□ -1.87
PTPN22-201ENST00000359785 TINCRA0A1B0GVN0 87 aa3.38□□□□□ -1.87
PTPN22-201ENST00000359785 LY6G6DO95868 133 aa3.38□□□□□ -1.87
PTPN22-201ENST00000359785 ORM2P19652 201 aa3.38□□□□□ -1.87
PTPN22-201ENST00000359785 GATA3P23771 443 aa3.38□□□□□ -1.87
PTPN22-201ENST00000359785 PRNTQ86SH4 94 aa3.38□□□□□ -1.87
PTPN22-201ENST00000359785 ZFAND2AQ8N6M9 145 aa3.38□□□□□ -1.87
PTPN22-201ENST00000359785 FOXC2Q99958 501 aa3.38□□□□□ -1.87
PTPN22-201ENST00000359785 TRBV7-1A0A0A6YYK4 115 aa3.38□□□□□ -1.87
PTPN22-201ENST00000359785 TRAV40A0A0B4J280 105 aa3.38□□□□□ -1.87
PTPN22-201ENST00000359785 H3BMM0 161 aa3.38□□□□□ -1.87
PTPN22-201ENST00000359785 ERC2-IT1O76042 136 aa3.38□□□□□ -1.87
PTPN22-201ENST00000359785 MFAP4P55083 255 aa3.38□□□□□ -1.87
PTPN22-201ENST00000359785 ZNF826PQ6ZT77 177 aa3.38□□□□□ -1.87
PTPN22-201ENST00000359785 UBE2WQ96B02 151 aa3.38□□□□□ -1.87
PTPN22-201ENST00000359785 METTL26Q96S19 204 aa3.38□□□□□ -1.87
PTPN22-201ENST00000359785 ARID1BQ8NFD5 2236 aaPredicted RBP3.37□□□□□ -1.87
PTPN22-201ENST00000359785 H7C423 109 aa3.37□□□□□ -1.87
PTPN22-201ENST00000359785 ATOX1O00244 68 aa3.37□□□□□ -1.87
PTPN22-201ENST00000359785 ATP5EP56381 51 aaPredicted RBP3.37□□□□□ -1.87
PTPN22-201ENST00000359785 HIST1H4GQ99525 98 aa3.37□□□□□ -1.87
PTPN22-201ENST00000359785 RAXQ9Y2V3 346 aa3.37□□□□□ -1.87
PTPN22-201ENST00000359785 MED13Q9UHV7 2174 aa3.37□□□□□ -1.87
PTPN22-201ENST00000359785 IGHV3-43A0A0B4J1X8 118 aa3.37□□□□□ -1.87
PTPN22-201ENST00000359785 FAM223BA6NKX1 122 aa3.37□□□□□ -1.87
PTPN22-201ENST00000359785 NDUFA1O15239 70 aa3.37□□□□□ -1.87
PTPN22-201ENST00000359785 CTSGP08311 255 aa3.37□□□□□ -1.87
PTPN22-201ENST00000359785 IGHV3-43DP0DP04 118 aa3.37□□□□□ -1.87
PTPN22-201ENST00000359785 FAM180AQ6UWF9 173 aa3.37□□□□□ -1.87
PTPN22-201ENST00000359785 FAM223AQ8IWN6 122 aa3.37□□□□□ -1.87
PTPN22-201ENST00000359785 IL17DQ8TAD2 202 aa3.37□□□□□ -1.87
PTPN22-201ENST00000359785 MUC7Q8TAX7 377 aa3.37□□□□□ -1.87
PTPN22-201ENST00000359785 FAM57AQ8TBR7 257 aa3.37□□□□□ -1.87
PTPN22-201ENST00000359785 C11orf21Q9P2W6 132 aa3.37□□□□□ -1.87
PTPN22-201ENST00000359785 TNRC18O15417 2968 aaPredicted RBP3.37□□□□□ -1.87
PTPN22-201ENST00000359785 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP3.37□□□□□ -1.87
PTPN22-201ENST00000359785 H3BQ85 93 aa3.37□□□□□ -1.87
PTPN22-201ENST00000359785 K7EMT4 169 aa3.37□□□□□ -1.87
PTPN22-201ENST00000359785 SPINK4O60575 86 aa3.37□□□□□ -1.87
PTPN22-201ENST00000359785 CNTFRP26992 372 aa3.37□□□□□ -1.87
PTPN22-201ENST00000359785 MLANAQ16655 118 aa3.37□□□□□ -1.87
PTPN22-201ENST00000359785 SFTA2Q6UW10 78 aa3.37□□□□□ -1.87
PTPN22-201ENST00000359785 TMEM61Q8N0U2 210 aa3.37□□□□□ -1.87
PTPN22-201ENST00000359785 EXOC3-AS1Q8N2X6 119 aa3.37□□□□□ -1.87
PTPN22-201ENST00000359785 KIR2DL4Q99706 377 aa3.37□□□□□ -1.87
PTPN22-201ENST00000359785 TRAV4A0A0B4J268 109 aa3.36□□□□□ -1.87
PTPN22-201ENST00000359785 CCDC179H3BU77 68 aa3.36□□□□□ -1.87
PTPN22-201ENST00000359785 SNCGO76070 127 aa3.36□□□□□ -1.87
PTPN22-201ENST00000359785 GRPP07492 148 aa3.36□□□□□ -1.87
PTPN22-201ENST00000359785 TSPEAR-AS2P59090 65 aa3.36□□□□□ -1.87
PTPN22-201ENST00000359785 HOXA4Q00056 320 aaPredicted RBP3.36□□□□□ -1.87
PTPN22-201ENST00000359785 ADIPOQQ15848 244 aa3.36□□□□□ -1.87
PTPN22-201ENST00000359785 C9orf106Q8NAJ2 232 aa3.36□□□□□ -1.87
PTPN22-201ENST00000359785 SCGB3A1Q96QR1 104 aa3.36□□□□□ -1.87
PTPN22-201ENST00000359785 TMEM160Q9NX00 188 aa3.36□□□□□ -1.87
PTPN22-201ENST00000359785 LMO4P61968 165 aa3.36□□□□□ -1.87
PTPN22-201ENST00000359785 CTSZQ9UBR2 303 aa3.36□□□□□ -1.87
PTPN22-201ENST00000359785 UFC1Q9Y3C8 167 aa3.36□□□□□ -1.87
PTPN22-201ENST00000359785 TRAV8-4A0A0B4J246 113 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms