RNA–Protein interactions for RNA: ENST00000358901.10

VCP-201, Transcript of valosin containing protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCP, Length 4,370 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-201ENST00000358901 CEP350Q5VT06 3117 aa10.8□□□□□ -0.68
VCP-201ENST00000358901 SPINK8P0C7L1 97 aa10.8□□□□□ -0.68
VCP-201ENST00000358901 IGHV3-16A0A0C4DH30 117 aa10.8□□□□□ -0.68
VCP-201ENST00000358901 K7ERJ3 54 aa10.8□□□□□ -0.68
VCP-201ENST00000358901 SPRY2O43597 315 aa10.8□□□□□ -0.68
VCP-201ENST00000358901 C6orf226Q5I0X4 101 aa10.8□□□□□ -0.68
VCP-201ENST00000358901 HIVEP3Q5T1R4 2406 aa10.8□□□□□ -0.68
VCP-201ENST00000358901 GATA1P15976 413 aaPredicted RBP10.8□□□□□ -0.68
VCP-201ENST00000358901 IGFL2Q6UWQ7 119 aa10.8□□□□□ -0.68
VCP-201ENST00000358901 AMTNQ6UX39 209 aa10.8□□□□□ -0.68
VCP-201ENST00000358901 PCP2Q8IVA1 136 aa10.8□□□□□ -0.68
VCP-201ENST00000358901 F6UB75 175 aa10.79□□□□□ -0.68
VCP-201ENST00000358901 LINC01356Q8N9X3 169 aa10.79□□□□□ -0.68
VCP-201ENST00000358901 IGHV1OR15-1A0A075B7D0 117 aa10.79□□□□□ -0.68
VCP-201ENST00000358901 K7EIM0 57 aa10.79□□□□□ -0.68
VCP-201ENST00000358901 A0A1W2PNU3 283 aaPredicted RBP10.79□□□□□ -0.68
VCP-201ENST00000358901 RNF223E7ERA6 249 aa10.79□□□□□ -0.68
VCP-201ENST00000358901 K7EP34 96 aa10.79□□□□□ -0.68
VCP-201ENST00000358901 HLA-DRB4P13762 266 aa10.79□□□□□ -0.68
VCP-201ENST00000358901 FOXE3Q13461 319 aa10.79□□□□□ -0.68
VCP-201ENST00000358901 HLA-DRB4X5D2U9 266 aa10.79□□□□□ -0.68
VCP-201ENST00000358901 A0A1W2PPM0 123 aa10.79□□□□□ -0.68
VCP-201ENST00000358901 H3BMG7 143 aa10.78□□□□□ -0.68
VCP-201ENST00000358901 MSMPQ1L6U9 139 aa10.78□□□□□ -0.68
VCP-201ENST00000358901 S100A7L2Q5SY68 101 aa10.78□□□□□ -0.68
VCP-201ENST00000358901 JPT2Q9H910 190 aa10.78□□□□□ -0.68
VCP-201ENST00000358901 MRPL36Q9P0J6 103 aaKnown RBP10.78□□□□□ -0.68
VCP-201ENST00000358901 TSSC4Q9Y5U2 329 aaPredicted RBP10.78□□□□□ -0.68
VCP-201ENST00000358901 E7EUB6 86 aa10.78□□□□□ -0.68
VCP-201ENST00000358901 MSRB1Q9NZV6 116 aa10.78□□□□□ -0.68
VCP-201ENST00000358901 KMT2EQ8IZD2 1858 aa10.78□□□□□ -0.68
VCP-201ENST00000358901 CRIP3Q6Q6R5 217 aa10.78□□□□□ -0.68
VCP-201ENST00000358901 TMEM141Q96I45 108 aa10.78□□□□□ -0.68
VCP-201ENST00000358901 ALPK3Q96L96 1907 aa10.78□□□□□ -0.68
VCP-201ENST00000358901 I3L2K1 104 aa10.77□□□□□ -0.68
VCP-201ENST00000358901 PROP1O75360 226 aa10.77□□□□□ -0.68
VCP-201ENST00000358901 DEFB130BP0DP73 79 aa10.77□□□□□ -0.68
VCP-201ENST00000358901 DEFB130AP0DP74 79 aa10.77□□□□□ -0.68
VCP-201ENST00000358901 CDKN1BP46527 198 aa10.77□□□□□ -0.68
VCP-201ENST00000358901 TCTEX1D4Q5JR98 221 aa10.77□□□□□ -0.68
VCP-201ENST00000358901 CMC4P56277 68 aaPredicted RBP10.77□□□□□ -0.69
VCP-201ENST00000358901 IGF2BP2-AS1Q96M15 143 aa10.77□□□□□ -0.69
VCP-201ENST00000358901 NAV3Q8IVL0 2385 aa10.77□□□□□ -0.69
VCP-201ENST00000358901 DSCAML1Q8TD84 2053 aa10.77□□□□□ -0.69
VCP-201ENST00000358901 C2orf16Q68DN1 1984 aa10.77□□□□□ -0.69
VCP-201ENST00000358901 RHODO00212 210 aa10.77□□□□□ -0.69
VCP-201ENST00000358901 SPRY4Q9C004 299 aa10.77□□□□□ -0.69
VCP-201ENST00000358901 I3L3M4 83 aa10.77□□□□□ -0.69
VCP-201ENST00000358901 CFHR4Q92496 578 aa10.77□□□□□ -0.69
VCP-201ENST00000358901 SEM1Q6ZVN7 128 aa10.76□□□□□ -0.69
VCP-201ENST00000358901 DOPEY1Q5JWR5 2465 aa10.76□□□□□ -0.69
VCP-201ENST00000358901 ANKRD39Q53RE8 183 aa10.76□□□□□ -0.69
VCP-201ENST00000358901 ODF3L1Q8IXM7 274 aa10.76□□□□□ -0.69
VCP-201ENST00000358901 GTSF1Q8WW33 167 aa10.76□□□□□ -0.69
VCP-201ENST00000358901 HIVEP2P31629 2446 aa10.76□□□□□ -0.69
VCP-201ENST00000358901 TRBV20-1A0A075B6N2 111 aa10.76□□□□□ -0.69
VCP-201ENST00000358901 DEFB125Q8N687 156 aa10.76□□□□□ -0.69
VCP-201ENST00000358901 IGHV3-38A0A0C4DH36 116 aa10.75□□□□□ -0.69
VCP-201ENST00000358901 GAGE12JA6NER3 117 aa10.75□□□□□ -0.69
VCP-201ENST00000358901 GNRH2O43555 120 aa10.75□□□□□ -0.69
VCP-201ENST00000358901 GAGE4Q13068 117 aa10.75□□□□□ -0.69
VCP-201ENST00000358901 GAGE5Q13069 117 aa10.75□□□□□ -0.69
VCP-201ENST00000358901 CCL25O15444 150 aa10.75□□□□□ -0.69
VCP-201ENST00000358901 CEND1Q8N111 149 aa10.75□□□□□ -0.69
VCP-201ENST00000358901 C1QTNF4Q9BXJ3 329 aa10.75□□□□□ -0.69
VCP-201ENST00000358901 LEPROTO15243 131 aa10.75□□□□□ -0.69
VCP-201ENST00000358901 OR11H6Q8NGC7 330 aa10.75□□□□□ -0.69
VCP-201ENST00000358901 TLN2Q9Y4G6 2542 aa10.75□□□□□ -0.69
VCP-201ENST00000358901 PRSS29PA6NIE9 313 aa10.75□□□□□ -0.69
VCP-201ENST00000358901 GATA3P23771 443 aa10.75□□□□□ -0.69
VCP-201ENST00000358901 C20orf78Q9BR46 151 aa10.75□□□□□ -0.69
VCP-201ENST00000358901 IGHV7-4-1A0A0J9YVY3 117 aa10.74□□□□□ -0.69
VCP-201ENST00000358901 GHRHP01286 108 aa10.74□□□□□ -0.69
VCP-201ENST00000358901 SETD2Q9BYW2 2564 aaPredicted RBP10.74□□□□□ -0.69
VCP-201ENST00000358901 F8W1H4 67 aa10.74□□□□□ -0.69
VCP-201ENST00000358901 FGF6P10767 208 aa10.74□□□□□ -0.69
VCP-201ENST00000358901 TCF15Q12870 199 aa10.74□□□□□ -0.69
VCP-201ENST00000358901 NDUFA12Q9UI09 145 aa10.74□□□□□ -0.69
VCP-201ENST00000358901 IGHV7-81A0A0B4J1V7 117 aa10.74□□□□□ -0.69
VCP-201ENST00000358901 CTSGP08311 255 aa10.74□□□□□ -0.69
VCP-201ENST00000358901 BRWD1-AS2P59051 145 aa10.74□□□□□ -0.69
VCP-201ENST00000358901 ZNF295-AS1Q8N0V1 137 aa10.74□□□□□ -0.69
VCP-201ENST00000358901 J3QQQ9 107 aa10.73□□□□□ -0.69
VCP-201ENST00000358901 SIVA1O15304 175 aa10.73□□□□□ -0.69
VCP-201ENST00000358901 P0C879 139 aa10.73□□□□□ -0.69
VCP-201ENST00000358901 PRO1854Q9UHT4 67 aa10.73□□□□□ -0.69
VCP-201ENST00000358901 CFHR3Q02985 330 aa10.73□□□□□ -0.69
VCP-201ENST00000358901 IGLV11-55A0A075B6I3 123 aa10.73□□□□□ -0.69
VCP-201ENST00000358901 VWC2LB2RUY7 222 aa10.73□□□□□ -0.69
VCP-201ENST00000358901 ZNRF2Q8NHG8 242 aa10.73□□□□□ -0.69
VCP-201ENST00000358901 C12orf74Q32Q52 190 aa10.72□□□□□ -0.69
VCP-201ENST00000358901 CEP295Q9C0D2 2601 aa10.72□□□□□ -0.69
VCP-201ENST00000358901 CENPVL3A0A0U1RRI6 287 aa10.72□□□□□ -0.69
VCP-201ENST00000358901 LGALS1P09382 135 aaKnown RBP10.72□□□□□ -0.69
VCP-201ENST00000358901 HIST1H4AP62805 103 aaKnown RBP10.72□□□□□ -0.69
VCP-201ENST00000358901 TRBV25-1A0A075B6N4 114 aa10.72□□□□□ -0.69
VCP-201ENST00000358901 LINC01545Q5VT33 79 aa10.72□□□□□ -0.69
VCP-201ENST00000358901 PPDPFLQ8WWR9 84 aa10.72□□□□□ -0.69
VCP-201ENST00000358901 DENND4AQ7Z401 1863 aa10.72□□□□□ -0.69
VCP-201ENST00000358901 IGLV1-47P01700 117 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 155.7 ms