RNA–Protein interactions for RNA: ENST00000358025.7

SYNE2-204, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SYNE2, Length 21,842 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-204ENST00000358025 A0A1B0GX51 115 aa3.25□□□□□ -1.89
SYNE2-204ENST00000358025 WT1P19544 449 aaPredicted RBP3.25□□□□□ -1.89
SYNE2-204ENST00000358025 PTH2Q96A98 100 aa3.25□□□□□ -1.89
SYNE2-204ENST00000358025 TET2Q6N021 2002 aaPredicted RBP3.25□□□□□ -1.89
SYNE2-204ENST00000358025 CEP192Q8TEP8 1941 aa3.25□□□□□ -1.89
SYNE2-204ENST00000358025 TMSB15BA0A087X1C1 80 aa3.25□□□□□ -1.89
SYNE2-204ENST00000358025 WI2-2373I1.2A0A1W2PRP0 233 aa3.25□□□□□ -1.89
SYNE2-204ENST00000358025 LY6EQ16553 131 aa3.25□□□□□ -1.89
SYNE2-204ENST00000358025 Q8N7P7 452 aa3.25□□□□□ -1.89
SYNE2-204ENST00000358025 VSIG2Q96IQ7 327 aa3.25□□□□□ -1.89
SYNE2-204ENST00000358025 PCP2Q8IVA1 136 aa3.25□□□□□ -1.89
SYNE2-204ENST00000358025 K7EMT4 169 aa3.25□□□□□ -1.89
SYNE2-204ENST00000358025 NPFFO15130 113 aa3.25□□□□□ -1.89
SYNE2-204ENST00000358025 MDFICQ9P1T7 246 aa3.25□□□□□ -1.89
SYNE2-204ENST00000358025 NDUFA11Q86Y39 141 aa3.25□□□□□ -1.89
SYNE2-204ENST00000358025 IGHV1-18A0A0C4DH31 117 aa3.25□□□□□ -1.89
SYNE2-204ENST00000358025 K7EIM0 57 aa3.25□□□□□ -1.89
SYNE2-204ENST00000358025 OXLD1Q5BKU9 147 aa3.25□□□□□ -1.89
SYNE2-204ENST00000358025 RASL10AQ92737 203 aa3.25□□□□□ -1.89
SYNE2-204ENST00000358025 SPAG8Q99932 426 aaPredicted RBP3.25□□□□□ -1.89
SYNE2-204ENST00000358025 TP53TG3Q9ULZ0 132 aa3.25□□□□□ -1.89
SYNE2-204ENST00000358025 TRAV3A0A0B4J244 114 aa3.25□□□□□ -1.89
SYNE2-204ENST00000358025 PRSS57Q6UWY2 283 aa3.25□□□□□ -1.89
SYNE2-204ENST00000358025 MYO9AB2RTY4 2548 aa3.25□□□□□ -1.89
SYNE2-204ENST00000358025 LTBP2Q14767 1821 aa3.25□□□□□ -1.89
SYNE2-204ENST00000358025 WT1-ASQ06250 92 aa3.25□□□□□ -1.89
SYNE2-204ENST00000358025 MEIG1Q5JSS6 88 aa3.25□□□□□ -1.89
SYNE2-204ENST00000358025 FAM201AQ5SY85 155 aa3.25□□□□□ -1.89
SYNE2-204ENST00000358025 C9orf153Q5TBE3 101 aa3.25□□□□□ -1.89
SYNE2-204ENST00000358025 WDR86Q86TI4 376 aa3.25□□□□□ -1.89
SYNE2-204ENST00000358025 PRORYQ9H606 182 aa3.25□□□□□ -1.89
SYNE2-204ENST00000358025 FXYD2P54710 66 aa3.25□□□□□ -1.89
SYNE2-204ENST00000358025 GAFA1Q96PS6 74 aa3.24□□□□□ -1.89
SYNE2-204ENST00000358025 PYGO1Q9Y3Y4 419 aa3.24□□□□□ -1.89
SYNE2-204ENST00000358025 I3L2K1 104 aa3.24□□□□□ -1.89
SYNE2-204ENST00000358025 CFC1BP0CG36 223 aa3.24□□□□□ -1.89
SYNE2-204ENST00000358025 CFC1P0CG37 223 aa3.24□□□□□ -1.89
SYNE2-204ENST00000358025 EDA2RQ9HAV5 297 aa3.24□□□□□ -1.89
SYNE2-204ENST00000358025 MRPL35Q9NZE8 188 aaKnown RBP3.24□□□□□ -1.89
SYNE2-204ENST00000358025 CENPFP49454 3210 aa3.24□□□□□ -1.89
SYNE2-204ENST00000358025 IGKV3-20P01619 116 aa3.24□□□□□ -1.89
SYNE2-204ENST00000358025 FAM110DQ8TAY7 271 aaPredicted RBP3.24□□□□□ -1.89
SYNE2-204ENST00000358025 SNAI2O43623 268 aa3.24□□□□□ -1.89
SYNE2-204ENST00000358025 IGKV1-16P04430 117 aa3.24□□□□□ -1.89
SYNE2-204ENST00000358025 DEFB104AQ8WTQ1 72 aa3.24□□□□□ -1.89
SYNE2-204ENST00000358025 AMTNQ6UX39 209 aa3.24□□□□□ -1.89
SYNE2-204ENST00000358025 CCL3L1P16619 93 aa3.24□□□□□ -1.89
SYNE2-204ENST00000358025 DCTN5Q9BTE1 182 aa3.24□□□□□ -1.89
SYNE2-204ENST00000358025 EXOC3-AS1Q8N2X6 119 aa3.24□□□□□ -1.89
SYNE2-204ENST00000358025 TMEM258P61165 79 aa3.24□□□□□ -1.89
SYNE2-204ENST00000358025 IGKV3OR2-268A0A0C4DH90 116 aa3.24□□□□□ -1.89
SYNE2-204ENST00000358025 CLUHP3Q96NS8 147 aa3.24□□□□□ -1.89
SYNE2-204ENST00000358025 SPRR3Q9UBC9 169 aa3.24□□□□□ -1.89
SYNE2-204ENST00000358025 I3L3M4 83 aa3.24□□□□□ -1.89
SYNE2-204ENST00000358025 CELA3BP08861 270 aa3.24□□□□□ -1.89
SYNE2-204ENST00000358025 PATE3B3GLJ2 98 aa3.24□□□□□ -1.89
SYNE2-204ENST00000358025 FOXG1P55316 489 aaPredicted RBP3.24□□□□□ -1.89
SYNE2-204ENST00000358025 GAGE2AQ6NT46 116 aa3.24□□□□□ -1.89
SYNE2-204ENST00000358025 LINC00310P59036 64 aa3.24□□□□□ -1.89
SYNE2-204ENST00000358025 NDUFA12Q9UI09 145 aa3.24□□□□□ -1.89
SYNE2-204ENST00000358025 CELA2AP08217 269 aa3.24□□□□□ -1.89
SYNE2-204ENST00000358025 IGKV1OR2-108A0A075B7D4 117 aa3.24□□□□□ -1.89
SYNE2-204ENST00000358025 H7C2G1 150 aa3.24□□□□□ -1.89
SYNE2-204ENST00000358025 NDUFA4O00483 81 aa3.24□□□□□ -1.89
SYNE2-204ENST00000358025 DSCR9P59020 149 aa3.24□□□□□ -1.89
SYNE2-204ENST00000358025 RSPO4Q2I0M5 234 aaPredicted RBP3.24□□□□□ -1.89
SYNE2-204ENST00000358025 TMEM219Q86XT9 240 aa3.24□□□□□ -1.89
SYNE2-204ENST00000358025 SPAARA0A1B0GVQ0 90 aa3.24□□□□□ -1.89
SYNE2-204ENST00000358025 HOXB4P17483 251 aaPredicted RBP3.24□□□□□ -1.89
SYNE2-204ENST00000358025 ZNF503Q96F45 646 aa3.24□□□□□ -1.89
SYNE2-204ENST00000358025 DUX3Q96PT4 197 aa3.24□□□□□ -1.89
SYNE2-204ENST00000358025 B5MCH6 92 aa3.23□□□□□ -1.89
SYNE2-204ENST00000358025 IGFL2Q6UWQ7 119 aa3.23□□□□□ -1.89
SYNE2-204ENST00000358025 TIMM21Q9BVV7 248 aa3.23□□□□□ -1.89
SYNE2-204ENST00000358025 LINC01620Q4KN68 170 aa3.23□□□□□ -1.89
SYNE2-204ENST00000358025 LRP4O75096 1905 aa3.23□□□□□ -1.89
SYNE2-204ENST00000358025 C11orf44Q8N8P7 122 aa3.23□□□□□ -1.89
SYNE2-204ENST00000358025 UBL5Q9BZL1 73 aa3.23□□□□□ -1.89
SYNE2-204ENST00000358025 A0A1W2PRX2 142 aa3.23□□□□□ -1.89
SYNE2-204ENST00000358025 CD7P09564 240 aa3.23□□□□□ -1.89
SYNE2-204ENST00000358025 LAMA2P24043 3122 aaKnown RBP3.23□□□□□ -1.89
SYNE2-204ENST00000358025 IGLV2-11P01706 119 aa3.23□□□□□ -1.89
SYNE2-204ENST00000358025 ZC2HC1AQ96GY0 325 aa3.23□□□□□ -1.89
SYNE2-204ENST00000358025 IGHG2P01859 326 aa3.23□□□□□ -1.89
SYNE2-204ENST00000358025 DAZ1Q9NQZ3 744 aaKnown RBP3.23□□□□□ -1.89
SYNE2-204ENST00000358025 MGPP08493 103 aa3.23□□□□□ -1.89
SYNE2-204ENST00000358025 EGR2P11161 476 aaPredicted RBP3.23□□□□□ -1.89
SYNE2-204ENST00000358025 C2orf66Q6UXQ4 117 aa3.23□□□□□ -1.89
SYNE2-204ENST00000358025 IGLV11-55A0A075B6I3 123 aa3.23□□□□□ -1.89
SYNE2-204ENST00000358025 IGKV2-40A0A087WW87 121 aaPredicted RBP3.23□□□□□ -1.89
SYNE2-204ENST00000358025 IGKV2D-40P01614 121 aaPredicted RBP3.23□□□□□ -1.89
SYNE2-204ENST00000358025 HERVK_113P63121 156 aa3.23□□□□□ -1.89
SYNE2-204ENST00000358025 GDF5OSQ5U4N7 250 aa3.23□□□□□ -1.89
SYNE2-204ENST00000358025 LGALS9O00182 355 aa3.23□□□□□ -1.89
SYNE2-204ENST00000358025 RNASE4P34096 147 aaKnown RBP3.23□□□□□ -1.89
SYNE2-204ENST00000358025 COL5A1P20908 1838 aaPredicted RBP3.23□□□□□ -1.89
SYNE2-204ENST00000358025 NFE4Q86UQ8 179 aa3.23□□□□□ -1.89
SYNE2-204ENST00000358025 BAALC-AS2P0C853 105 aa3.23□□□□□ -1.89
SYNE2-204ENST00000358025 KLRB1Q12918 225 aa3.23□□□□□ -1.89
SYNE2-204ENST00000358025 PEMTQ9UBM1 199 aa3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms