RNA–Protein interactions for RNA: ENST00000356025.7

SIRPA-201, Transcript of signal regulatory protein alpha, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SIRPA, Length 3,867 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPA-201ENST00000356025 LINC00477Q96M19 166 aa9.4□□□□□ -0.91
SIRPA-201ENST00000356025 IGHV4-30-2A0A087WSY4 118 aa9.39□□□□□ -0.91
SIRPA-201ENST00000356025 A0A0G2JLM5 398 aa9.39□□□□□ -0.91
SIRPA-201ENST00000356025 ODF3BA8MYP8 253 aa9.39□□□□□ -0.91
SIRPA-201ENST00000356025 SIRPDQ9H106 197 aa9.39□□□□□ -0.91
SIRPA-201ENST00000356025 CUBNO60494 3623 aa9.39□□□□□ -0.91
SIRPA-201ENST00000356025 A0A087WWL8 130 aa9.39□□□□□ -0.91
SIRPA-201ENST00000356025 CD5LO43866 347 aa9.39□□□□□ -0.91
SIRPA-201ENST00000356025 CCDC140Q96MF4 163 aa9.39□□□□□ -0.91
SIRPA-201ENST00000356025 SRSF8Q9BRL6 282 aaKnown RBP9.39□□□□□ -0.91
SIRPA-201ENST00000356025 K7ERJ3 54 aa9.39□□□□□ -0.91
SIRPA-201ENST00000356025 LMO4P61968 165 aa9.39□□□□□ -0.91
SIRPA-201ENST00000356025 Q6ZS46 218 aa9.39□□□□□ -0.91
SIRPA-201ENST00000356025 ITLN2Q8WWU7 325 aaPredicted RBP9.39□□□□□ -0.91
SIRPA-201ENST00000356025 RHPN1-AS1Q9BWJ2 59 aa9.39□□□□□ -0.91
SIRPA-201ENST00000356025 NPFFR1Q9GZQ6 430 aa9.39□□□□□ -0.91
SIRPA-201ENST00000356025 ZNF256Q9Y2P7 627 aaPredicted RBP9.39□□□□□ -0.91
SIRPA-201ENST00000356025 HRNRQ86YZ3 2850 aaPredicted RBP9.38□□□□□ -0.91
SIRPA-201ENST00000356025 TRAV12-3A0A0B4J271 114 aa9.38□□□□□ -0.91
SIRPA-201ENST00000356025 SCRT2Q9NQ03 307 aa9.38□□□□□ -0.91
SIRPA-201ENST00000356025 NHP2Q9NX24 153 aaKnown RBP9.38□□□□□ -0.91
SIRPA-201ENST00000356025 TRAV12-2A0A075B6T6 113 aa9.38□□□□□ -0.91
SIRPA-201ENST00000356025 GNRH2O43555 120 aa9.38□□□□□ -0.91
SIRPA-201ENST00000356025 SLC50A1Q9BRV3 221 aa9.38□□□□□ -0.91
SIRPA-201ENST00000356025 UTP20O75691 2785 aaKnown RBP9.38□□□□□ -0.91
SIRPA-201ENST00000356025 AGRNO00468 2067 aa9.38□□□□□ -0.91
SIRPA-201ENST00000356025 IGHV3OR16-12A0A075B7B8 117 aa9.38□□□□□ -0.91
SIRPA-201ENST00000356025 F8W735 103 aaPredicted RBP9.38□□□□□ -0.91
SIRPA-201ENST00000356025 FABP2P12104 132 aa9.38□□□□□ -0.91
SIRPA-201ENST00000356025 FBXL19-AS1Q494R0 122 aa9.38□□□□□ -0.91
SIRPA-201ENST00000356025 ZC2HC1BQ5TFG8 222 aa9.38□□□□□ -0.91
SIRPA-201ENST00000356025 SCGB1D4Q6XE38 83 aa9.38□□□□□ -0.91
SIRPA-201ENST00000356025 ARL6IP6Q8N6S5 226 aa9.38□□□□□ -0.91
SIRPA-201ENST00000356025 IGHV3-73A0A0B4J1V6 119 aa9.37□□□□□ -0.91
SIRPA-201ENST00000356025 IGHV1-69DA0A0B4J2H0 117 aa9.37□□□□□ -0.91
SIRPA-201ENST00000356025 OOSP1A8MZH6 123 aa9.37□□□□□ -0.91
SIRPA-201ENST00000356025 SMAD7O15105 426 aaKnown RBP9.37□□□□□ -0.91
SIRPA-201ENST00000356025 IGHV1-69P01742 117 aa9.37□□□□□ -0.91
SIRPA-201ENST00000356025 CD7P09564 240 aa9.37□□□□□ -0.91
SIRPA-201ENST00000356025 PSMG4Q5JS54 123 aa9.37□□□□□ -0.91
SIRPA-201ENST00000356025 C11orf71Q6IPW1 123 aa9.37□□□□□ -0.91
SIRPA-201ENST00000356025 JMJD8Q96S16 334 aa9.37□□□□□ -0.91
SIRPA-201ENST00000356025 A0A1B0GW15 77 aa9.37□□□□□ -0.91
SIRPA-201ENST00000356025 COX8AP10176 69 aa9.37□□□□□ -0.91
SIRPA-201ENST00000356025 OR1N2Q8NGR9 330 aa9.37□□□□□ -0.91
SIRPA-201ENST00000356025 RAB9AP51151 201 aa9.36□□□□□ -0.91
SIRPA-201ENST00000356025 C10orf99Q6UWK7 81 aa9.36□□□□□ -0.91
SIRPA-201ENST00000356025 FAM159AQ6UWV7 190 aa9.36□□□□□ -0.91
SIRPA-201ENST00000356025 GTSF1LQ9H1H1 148 aa9.36□□□□□ -0.91
SIRPA-201ENST00000356025 ASIPP42127 132 aa9.36□□□□□ -0.91
SIRPA-201ENST00000356025 SMAGPQ0VAQ4 97 aa9.36□□□□□ -0.91
SIRPA-201ENST00000356025 DUX3Q96PT4 197 aa9.36□□□□□ -0.91
SIRPA-201ENST00000356025 SCGB3A1Q96QR1 104 aa9.36□□□□□ -0.91
SIRPA-201ENST00000356025 Q5PR19 223 aa9.35□□□□□ -0.91
SIRPA-201ENST00000356025 MS4A6AQ9H2W1 248 aa9.35□□□□□ -0.91
SIRPA-201ENST00000356025 ZANQ9Y493 2812 aa9.35□□□□□ -0.91
SIRPA-201ENST00000356025 EDN2P20800 178 aa9.35□□□□□ -0.91
SIRPA-201ENST00000356025 TRBV7-1A0A0A6YYK4 115 aa9.35□□□□□ -0.91
SIRPA-201ENST00000356025 ZNF56Q15929 161 aa9.35□□□□□ -0.91
SIRPA-201ENST00000356025 ANXA2RQ3ZCQ2 193 aa9.35□□□□□ -0.91
SIRPA-201ENST00000356025 C5orf56Q8N8D9 126 aa9.35□□□□□ -0.91
SIRPA-201ENST00000356025 HIST1H4GQ99525 98 aa9.35□□□□□ -0.91
SIRPA-201ENST00000356025 BEX4Q9NWD9 120 aaPredicted RBP9.35□□□□□ -0.91
SIRPA-201ENST00000356025 ITPR1Q14643 2758 aa9.35□□□□□ -0.91
SIRPA-201ENST00000356025 IGKV3D-20A0A0C4DH25 116 aa9.34□□□□□ -0.91
SIRPA-201ENST00000356025 A0A1W2PRX2 142 aa9.34□□□□□ -0.91
SIRPA-201ENST00000356025 NPIPB6E9PJ23 425 aa9.34□□□□□ -0.91
SIRPA-201ENST00000356025 C11orf21Q9P2W6 132 aa9.34□□□□□ -0.91
SIRPA-201ENST00000356025 CFAP46Q8IYW2 2715 aa9.34□□□□□ -0.91
SIRPA-201ENST00000356025 IGHV3-64A0A075B6Q5 118 aa9.34□□□□□ -0.91
SIRPA-201ENST00000356025 TMEM8BA6NDV4 472 aa9.34□□□□□ -0.91
SIRPA-201ENST00000356025 IGHV4-59P01825 116 aa9.34□□□□□ -0.91
SIRPA-201ENST00000356025 SYNJ2BPP57105 145 aa9.34□□□□□ -0.91
SIRPA-201ENST00000356025 RPL39LQ96EH5 51 aaKnown RBP9.34□□□□□ -0.91
SIRPA-201ENST00000356025 FASNP49327 2511 aaKnown RBP9.34□□□□□ -0.91
SIRPA-201ENST00000356025 SMIM13P0DJ93 91 aa9.34□□□□□ -0.91
SIRPA-201ENST00000356025 SRSF9Q13242 221 aaKnown RBP eCLIP9.34□□□□□ -0.91
SIRPA-201ENST00000356025 KLK9Q9UKQ9 250 aa9.34□□□□□ -0.91
SIRPA-201ENST00000356025 MRPS12O15235 138 aaKnown RBP9.33□□□□□ -0.92
SIRPA-201ENST00000356025 RNF223E7ERA6 249 aa9.33□□□□□ -0.92
SIRPA-201ENST00000356025 SAMD5Q5TGI4 173 aa9.33□□□□□ -0.92
SIRPA-201ENST00000356025 JPT2Q9H910 190 aa9.33□□□□□ -0.92
SIRPA-201ENST00000356025 MRPL35Q9NZE8 188 aaKnown RBP9.33□□□□□ -0.92
SIRPA-201ENST00000356025 H7C2G1 150 aa9.33□□□□□ -0.92
SIRPA-201ENST00000356025 SEC11AP67812 179 aa9.33□□□□□ -0.92
SIRPA-201ENST00000356025 CD300EQ496F6 205 aaPredicted RBP9.33□□□□□ -0.92
SIRPA-201ENST00000356025 IGKCP01834 107 aa9.32□□□□□ -0.92
SIRPA-201ENST00000356025 DEFB136Q30KP8 78 aa9.32□□□□□ -0.92
SIRPA-201ENST00000356025 LINC01545Q5VT33 79 aa9.32□□□□□ -0.92
SIRPA-201ENST00000356025 AMTNQ6UX39 209 aa9.32□□□□□ -0.92
SIRPA-201ENST00000356025 C1orf122Q6ZSJ8 110 aa9.32□□□□□ -0.92
SIRPA-201ENST00000356025 DPF1Q92782 380 aa9.32□□□□□ -0.92
SIRPA-201ENST00000356025 NXT2Q9NPJ8 142 aaKnown RBP9.32□□□□□ -0.92
SIRPA-201ENST00000356025 MSMBP08118 114 aa9.32□□□□□ -0.92
SIRPA-201ENST00000356025 TRAV21A0A0B4J279 112 aa9.32□□□□□ -0.92
SIRPA-201ENST00000356025 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.32□□□□□ -0.92
SIRPA-201ENST00000356025 C20orf173Q96LM9 149 aa9.32□□□□□ -0.92
SIRPA-201ENST00000356025 LAGE3Q14657 143 aa9.31□□□□□ -0.92
SIRPA-201ENST00000356025 SPINK13Q1W4C9 94 aa9.31□□□□□ -0.92
SIRPA-201ENST00000356025 CSTL1Q9H114 145 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms