RNA–Protein interactions for RNA: ENST00000356017.8

TRIM13-201, Transcript of tripartite motif containing 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRIM13, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-201ENST00000356017 IL17DQ8TAD2 202 aa11.16□□□□□ -0.62
TRIM13-201ENST00000356017 WWC2-AS2Q96NR7 200 aa11.16□□□□□ -0.62
TRIM13-201ENST00000356017 CXorf65A6NEN9 183 aa11.15□□□□□ -0.62
TRIM13-201ENST00000356017 SH2D1AO60880 128 aa11.15□□□□□ -0.62
TRIM13-201ENST00000356017 MGST1P10620 155 aaKnown RBP11.15□□□□□ -0.62
TRIM13-201ENST00000356017 SRSF3P84103 164 aaKnown RBP11.15□□□□□ -0.62
TRIM13-201ENST00000356017 FAM74A3Q4VXF1 159 aa11.15□□□□□ -0.62
TRIM13-201ENST00000356017 C11orf45Q8TAV5 145 aa11.15□□□□□ -0.62
TRIM13-201ENST00000356017 SMIM7Q9BQ49 75 aa11.15□□□□□ -0.62
TRIM13-201ENST00000356017 PLAC8L1A1L4L8 177 aa11.14□□□□□ -0.63
TRIM13-201ENST00000356017 LYRM9A8MSI8 78 aa11.14□□□□□ -0.63
TRIM13-201ENST00000356017 ZNF727A8MUV8 499 aa11.14□□□□□ -0.63
TRIM13-201ENST00000356017 IGLV2-8P01709 118 aa11.14□□□□□ -0.63
TRIM13-201ENST00000356017 ORM1P02763 201 aa11.14□□□□□ -0.63
TRIM13-201ENST00000356017 PRR27Q6MZM9 219 aa11.14□□□□□ -0.63
TRIM13-201ENST00000356017 DAZAP1Q96EP5 407 aaKnown RBP11.14□□□□□ -0.63
TRIM13-201ENST00000356017 DKK2Q9UBU2 259 aa11.14□□□□□ -0.63
TRIM13-201ENST00000356017 TP53TG3Q9ULZ0 132 aa11.14□□□□□ -0.63
TRIM13-201ENST00000356017 LY96Q9Y6Y9 160 aa11.14□□□□□ -0.63
TRIM13-201ENST00000356017 TENM3Q9P273 2699 aa11.14□□□□□ -0.63
TRIM13-201ENST00000356017 ZNF415Q09FC8 603 aa11.13□□□□□ -0.63
TRIM13-201ENST00000356017 DAZ2Q13117 558 aaKnown RBP11.13□□□□□ -0.63
TRIM13-201ENST00000356017 FAM222AQ5U5X8 452 aa11.13□□□□□ -0.63
TRIM13-201ENST00000356017 C11orf72Q8NBR9 251 aa11.13□□□□□ -0.63
TRIM13-201ENST00000356017 GSN-AS1Q9NRJ2 163 aa11.13□□□□□ -0.63
TRIM13-201ENST00000356017 C11orf21Q9P2W6 132 aa11.13□□□□□ -0.63
TRIM13-201ENST00000356017 IGKV3D-20A0A0C4DH25 116 aa11.13□□□□□ -0.63
TRIM13-201ENST00000356017 B4DEV8 164 aa11.13□□□□□ -0.63
TRIM13-201ENST00000356017 C9JQL5 133 aa11.13□□□□□ -0.63
TRIM13-201ENST00000356017 GNRH2O43555 120 aa11.13□□□□□ -0.63
TRIM13-201ENST00000356017 LINC01559Q495D7 138 aa11.13□□□□□ -0.63
TRIM13-201ENST00000356017 NOP10Q9NPE3 64 aaKnown RBP11.13□□□□□ -0.63
TRIM13-201ENST00000356017 TGP01266 2768 aa11.12□□□□□ -0.63
TRIM13-201ENST00000356017 PGPEP1LA6NFU8 196 aa11.12□□□□□ -0.63
TRIM13-201ENST00000356017 TYMSP04818 313 aa11.12□□□□□ -0.63
TRIM13-201ENST00000356017 TCL1AP56279 114 aa11.12□□□□□ -0.63
TRIM13-201ENST00000356017 SOHLH1Q5JUK2 328 aa11.12□□□□□ -0.63
TRIM13-201ENST00000356017 UQCC3Q6UW78 93 aa11.12□□□□□ -0.63
TRIM13-201ENST00000356017 OCC1Q8TAD7 63 aa11.12□□□□□ -0.63
TRIM13-201ENST00000356017 MDFICQ9P1T7 246 aa11.12□□□□□ -0.63
TRIM13-201ENST00000356017 IGHV3-16A0A0C4DH30 117 aa11.11□□□□□ -0.63
TRIM13-201ENST00000356017 KRBOX1C9JBD0 128 aa11.11□□□□□ -0.63
TRIM13-201ENST00000356017 SPXQ9BT56 116 aa11.11□□□□□ -0.63
TRIM13-201ENST00000356017 CELA1Q9UNI1 258 aa11.11□□□□□ -0.63
TRIM13-201ENST00000356017 M0R036 132 aa11.1□□□□□ -0.63
TRIM13-201ENST00000356017 S100A4P26447 101 aaKnown RBP11.1□□□□□ -0.63
TRIM13-201ENST00000356017 OR5I1Q13606 314 aa11.1□□□□□ -0.63
TRIM13-201ENST00000356017 TMEM241Q24JQ0 296 aa11.1□□□□□ -0.63
TRIM13-201ENST00000356017 C19orf71A6NCJ1 209 aa11.09□□□□□ -0.63
TRIM13-201ENST00000356017 P01737 135 aa11.09□□□□□ -0.63
TRIM13-201ENST00000356017 ASIPP42127 132 aa11.09□□□□□ -0.63
TRIM13-201ENST00000356017 LGALS9BQ3B8N2 356 aa11.09□□□□□ -0.63
TRIM13-201ENST00000356017 K7EN84 100 aa11.09□□□□□ -0.63
TRIM13-201ENST00000356017 NANOS2P60321 138 aaKnown RBP11.09□□□□□ -0.63
TRIM13-201ENST00000356017 DAD1P61803 113 aa11.09□□□□□ -0.63
TRIM13-201ENST00000356017 DNLZQ5SXM8 178 aa11.09□□□□□ -0.63
TRIM13-201ENST00000356017 LINC01551Q86U37 167 aa11.09□□□□□ -0.63
TRIM13-201ENST00000356017 NAT8Q9UHE5 227 aa11.09□□□□□ -0.63
TRIM13-201ENST00000356017 STAB2Q8WWQ8 2551 aa11.08□□□□□ -0.64
TRIM13-201ENST00000356017 XKRY2A2RUG3 117 aa11.08□□□□□ -0.64
TRIM13-201ENST00000356017 SPINK4O60575 86 aa11.08□□□□□ -0.64
TRIM13-201ENST00000356017 CXCL1P09341 107 aa11.08□□□□□ -0.64
TRIM13-201ENST00000356017 SFTA3P0C7M3 94 aa11.08□□□□□ -0.64
TRIM13-201ENST00000356017 DEFB130BP0DP73 79 aa11.08□□□□□ -0.64
TRIM13-201ENST00000356017 DEFB130AP0DP74 79 aa11.08□□□□□ -0.64
TRIM13-201ENST00000356017 C12orf74Q32Q52 190 aa11.08□□□□□ -0.64
TRIM13-201ENST00000356017 MUC7Q8TAX7 377 aa11.08□□□□□ -0.64
TRIM13-201ENST00000356017 M0R2P5 195 aa11.07□□□□□ -0.64
TRIM13-201ENST00000356017 SCO1O75880 301 aa11.07□□□□□ -0.64
TRIM13-201ENST00000356017 RPS20P60866 119 aaKnown RBP11.07□□□□□ -0.64
TRIM13-201ENST00000356017 IL36BQ9NZH7 164 aa11.07□□□□□ -0.64
TRIM13-201ENST00000356017 TMSB15BA0A087X1C1 80 aa11.06□□□□□ -0.64
TRIM13-201ENST00000356017 TRGV1A0A0A0MS02 117 aa11.06□□□□□ -0.64
TRIM13-201ENST00000356017 RNASE3P12724 160 aaKnown RBP11.06□□□□□ -0.64
TRIM13-201ENST00000356017 FAM231DQ6ZW35 169 aa11.06□□□□□ -0.64
TRIM13-201ENST00000356017 LINC00612Q8N6U2 182 aa11.06□□□□□ -0.64
TRIM13-201ENST00000356017 NUDT10Q8NFP7 164 aa11.06□□□□□ -0.64
TRIM13-201ENST00000356017 OR2D3Q8NGH3 330 aa11.06□□□□□ -0.64
TRIM13-201ENST00000356017 RASL10AQ92737 203 aa11.06□□□□□ -0.64
TRIM13-201ENST00000356017 NUDT11Q96G61 164 aa11.06□□□□□ -0.64
TRIM13-201ENST00000356017 C9orf85Q96MD7 179 aa11.06□□□□□ -0.64
TRIM13-201ENST00000356017 GRIFINA4D1Z8 144 aa11.06□□□□□ -0.64
TRIM13-201ENST00000356017 ERVFC1-1P60608 527 aa11.06□□□□□ -0.64
TRIM13-201ENST00000356017 RPL19P84098 196 aaKnown RBP11.06□□□□□ -0.64
TRIM13-201ENST00000356017 Q6ZTC4 211 aa11.06□□□□□ -0.64
TRIM13-201ENST00000356017 Q6ZTI0 123 aa11.06□□□□□ -0.64
TRIM13-201ENST00000356017 C18orf15Q96N68 181 aa11.06□□□□□ -0.64
TRIM13-201ENST00000356017 NDUFAF3Q9BU61 184 aa11.06□□□□□ -0.64
TRIM13-201ENST00000356017 TRGV2A0A075B6R0 118 aa11.05□□□□□ -0.64
TRIM13-201ENST00000356017 GAGE12BA1L429 117 aa11.05□□□□□ -0.64
TRIM13-201ENST00000356017 GAGE7O76087 117 aa11.05□□□□□ -0.64
TRIM13-201ENST00000356017 GAGE12FP0CL80 117 aa11.05□□□□□ -0.64
TRIM13-201ENST00000356017 GAGE12GP0CL81 117 aa11.05□□□□□ -0.64
TRIM13-201ENST00000356017 GAGE12IP0CL82 117 aa11.05□□□□□ -0.64
TRIM13-201ENST00000356017 ZNF575Q86XF7 245 aa11.05□□□□□ -0.64
TRIM13-201ENST00000356017 PTH2Q96A98 100 aa11.05□□□□□ -0.64
TRIM13-201ENST00000356017 RNASE7Q9H1E1 156 aaKnown RBP11.05□□□□□ -0.64
TRIM13-201ENST00000356017 TRAV10A0A0B4J240 114 aa11.04□□□□□ -0.64
TRIM13-201ENST00000356017 TMEM218A2RU14 115 aa11.04□□□□□ -0.64
TRIM13-201ENST00000356017 C3orf84H3BNL1 204 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 686.7 ms