RNA–Protein interactions for RNA: ENST00000354433.7

CDRT1-202, CMT1A duplicated region transcript 1, humanhuman

TSL 2 BASIC

Gene CDRT1, Length 1,557 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-202ENST00000354433 MT-ND6P03923 174 aa8.45□□□□□ -1.06
CDRT1-202ENST00000354433 IGFL4Q6B9Z1 124 aa8.45□□□□□ -1.06
CDRT1-202ENST00000354433 ATP5L2Q7Z4Y8 100 aa8.45□□□□□ -1.06
CDRT1-202ENST00000354433 STHQ8IWL8 128 aa8.45□□□□□ -1.06
CDRT1-202ENST00000354433 RNF182Q8N6D2 247 aa8.45□□□□□ -1.06
CDRT1-202ENST00000354433 FRZBQ92765 325 aa8.45□□□□□ -1.06
CDRT1-202ENST00000354433 VGLL1Q99990 258 aa8.45□□□□□ -1.06
CDRT1-202ENST00000354433 GNB1LQ9BYB4 327 aa8.45□□□□□ -1.06
CDRT1-202ENST00000354433 LENEPQ9Y5L5 61 aa8.45□□□□□ -1.06
CDRT1-202ENST00000354433 TRAV2A0A0B4J234 112 aa8.44□□□□□ -1.06
CDRT1-202ENST00000354433 NUPR2A6NF83 97 aa8.44□□□□□ -1.06
CDRT1-202ENST00000354433 HIST1H2BKO60814 126 aa8.44□□□□□ -1.06
CDRT1-202ENST00000354433 HIST1H2BJP06899 126 aa8.44□□□□□ -1.06
CDRT1-202ENST00000354433 HIST1H2BOP23527 126 aa8.44□□□□□ -1.06
CDRT1-202ENST00000354433 HIST1H2BBP33778 126 aa8.44□□□□□ -1.06
CDRT1-202ENST00000354433 ID1P41134 155 aa8.44□□□□□ -1.06
CDRT1-202ENST00000354433 FOXA3P55318 350 aaPredicted RBP8.44□□□□□ -1.06
CDRT1-202ENST00000354433 HIST1H2BDP58876 126 aa8.44□□□□□ -1.06
CDRT1-202ENST00000354433 HIST1H2BCP62807 126 aa8.44□□□□□ -1.06
CDRT1-202ENST00000354433 HIST2H2BEQ16778 126 aa8.44□□□□□ -1.06
CDRT1-202ENST00000354433 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.44□□□□□ -1.06
CDRT1-202ENST00000354433 FAM162BQ5T6X4 162 aa8.44□□□□□ -1.06
CDRT1-202ENST00000354433 HIST1H2BHQ93079 126 aa8.44□□□□□ -1.06
CDRT1-202ENST00000354433 HIST1H2BNQ99877 126 aa8.44□□□□□ -1.06
CDRT1-202ENST00000354433 HIST1H2BMQ99879 126 aa8.44□□□□□ -1.06
CDRT1-202ENST00000354433 TRAPPC1Q9Y5R8 145 aa8.44□□□□□ -1.06
CDRT1-202ENST00000354433 DNAH1Q9P2D7 4330 aa8.44□□□□□ -1.06
CDRT1-202ENST00000354433 PRAC2D3DTV9 90 aa8.44□□□□□ -1.06
CDRT1-202ENST00000354433 ZNF688P0C7X2 276 aa8.44□□□□□ -1.06
CDRT1-202ENST00000354433 TRGC1P0CF51 173 aa8.44□□□□□ -1.06
CDRT1-202ENST00000354433 CRIP1P50238 77 aa8.44□□□□□ -1.06
CDRT1-202ENST00000354433 ZNF138P52744 262 aa8.44□□□□□ -1.06
CDRT1-202ENST00000354433 SMUG1Q53HV7 270 aa8.44□□□□□ -1.06
CDRT1-202ENST00000354433 TMEM78Q5T7P6 136 aa8.44□□□□□ -1.06
CDRT1-202ENST00000354433 NUP35Q8NFH5 326 aa8.44□□□□□ -1.06
CDRT1-202ENST00000354433 LINC00477Q96M19 166 aa8.44□□□□□ -1.06
CDRT1-202ENST00000354433 C8orf49Q96NF6 230 aa8.44□□□□□ -1.06
CDRT1-202ENST00000354433 NEU1Q99519 415 aa8.44□□□□□ -1.06
CDRT1-202ENST00000354433 TRBV7-9A0A0J9YWB2 115 aa8.43□□□□□ -1.06
CDRT1-202ENST00000354433 HIGD1CA8MV81 97 aa8.43□□□□□ -1.06
CDRT1-202ENST00000354433 RPS20P60866 119 aaKnown RBP8.43□□□□□ -1.06
CDRT1-202ENST00000354433 FABP9Q0Z7S8 132 aa8.43□□□□□ -1.06
CDRT1-202ENST00000354433 Q6AWC8 147 aa8.43□□□□□ -1.06
CDRT1-202ENST00000354433 ZNF738Q8NE65 137 aa8.43□□□□□ -1.06
CDRT1-202ENST00000354433 OR2D3Q8NGH3 330 aa8.43□□□□□ -1.06
CDRT1-202ENST00000354433 OR11H2Q8NH07 326 aa8.43□□□□□ -1.06
CDRT1-202ENST00000354433 AGPAT4-IT1Q9H0P7 198 aa8.43□□□□□ -1.06
CDRT1-202ENST00000354433 XKRY2A2RUG3 117 aa8.42□□□□□ -1.06
CDRT1-202ENST00000354433 SH2D1AO60880 128 aa8.42□□□□□ -1.06
CDRT1-202ENST00000354433 LY6G6CO95867 125 aa8.42□□□□□ -1.06
CDRT1-202ENST00000354433 HLA-DQA1P01909 254 aa8.42□□□□□ -1.06
CDRT1-202ENST00000354433 TCL1AP56279 114 aa8.42□□□□□ -1.06
CDRT1-202ENST00000354433 SNRPEP62304 92 aaKnown RBP8.42□□□□□ -1.06
CDRT1-202ENST00000354433 DCANP1Q8TF63 244 aa8.42□□□□□ -1.06
CDRT1-202ENST00000354433 C20orf173Q96LM9 149 aa8.42□□□□□ -1.06
CDRT1-202ENST00000354433 FABP5P3A8MUU1 101 aa8.41□□□□□ -1.06
CDRT1-202ENST00000354433 K7EQG2 157 aa8.41□□□□□ -1.06
CDRT1-202ENST00000354433 ERCC8Q13216 396 aa8.41□□□□□ -1.06
CDRT1-202ENST00000354433 PSMG4Q5JS54 123 aa8.41□□□□□ -1.06
CDRT1-202ENST00000354433 COA6Q5JTJ3 125 aaKnown RBP8.41□□□□□ -1.06
CDRT1-202ENST00000354433 OR10J6PQ8NGY7 276 aa8.41□□□□□ -1.06
CDRT1-202ENST00000354433 Q8TAT8 98 aa8.41□□□□□ -1.06
CDRT1-202ENST00000354433 GTSF1Q8WW33 167 aa8.41□□□□□ -1.06
CDRT1-202ENST00000354433 KLK5Q9Y337 293 aaPredicted RBP8.41□□□□□ -1.06
CDRT1-202ENST00000354433 A0A1B0GXF2 115 aa8.4□□□□□ -1.06
CDRT1-202ENST00000354433 TMEM189A5PLL7 270 aa8.4□□□□□ -1.06
CDRT1-202ENST00000354433 KNCNA6PVL3 124 aa8.4□□□□□ -1.06
CDRT1-202ENST00000354433 SNURFLB1AK76 121 aa8.4□□□□□ -1.06
CDRT1-202ENST00000354433 HOXA5P20719 270 aa8.4□□□□□ -1.06
CDRT1-202ENST00000354433 HIST1H1AQ02539 215 aaPredicted RBP8.4□□□□□ -1.06
CDRT1-202ENST00000354433 CEMP1Q6PRD7 247 aaPredicted RBP8.4□□□□□ -1.06
CDRT1-202ENST00000354433 TMEM136Q6ZRR5 245 aa8.4□□□□□ -1.06
CDRT1-202ENST00000354433 LINC00476Q8WZB0 136 aa8.4□□□□□ -1.06
CDRT1-202ENST00000354433 MRPL18Q9H0U6 180 aaKnown RBP8.4□□□□□ -1.06
CDRT1-202ENST00000354433 PLECQ15149 4684 aaKnown RBP8.4□□□□□ -1.06
CDRT1-202ENST00000354433 ALMS1Q8TCU4 4167 aa8.4□□□□□ -1.07
CDRT1-202ENST00000354433 A0A1B0GW15 77 aa8.39□□□□□ -1.07
CDRT1-202ENST00000354433 DEFB4AO15263 64 aa8.39□□□□□ -1.07
CDRT1-202ENST00000354433 NDUFA6P56556 154 aa8.39□□□□□ -1.07
CDRT1-202ENST00000354433 SNRPD3P62318 126 aaKnown RBP8.39□□□□□ -1.07
CDRT1-202ENST00000354433 MRPL54Q6P161 138 aaKnown RBP8.39□□□□□ -1.07
CDRT1-202ENST00000354433 OR8A1Q8NGG7 326 aa8.39□□□□□ -1.07
CDRT1-202ENST00000354433 C11orf45Q8TAV5 145 aa8.39□□□□□ -1.07
CDRT1-202ENST00000354433 KRTAP3-3Q9BYR6 98 aa8.39□□□□□ -1.07
CDRT1-202ENST00000354433 KRTAP3-2Q9BYR7 98 aa8.39□□□□□ -1.07
CDRT1-202ENST00000354433 S100A8P05109 93 aa8.39□□□□□ -1.07
CDRT1-202ENST00000354433 ZNF80P51504 273 aaPredicted RBP8.39□□□□□ -1.07
CDRT1-202ENST00000354433 NANOS2P60321 138 aaKnown RBP8.39□□□□□ -1.07
CDRT1-202ENST00000354433 HBBP68871 147 aa8.39□□□□□ -1.07
CDRT1-202ENST00000354433 LINC01559Q495D7 138 aa8.39□□□□□ -1.07
CDRT1-202ENST00000354433 MORN3Q6PF18 240 aaPredicted RBP8.39□□□□□ -1.07
CDRT1-202ENST00000354433 TRPT1Q86TN4 253 aaKnown RBP8.39□□□□□ -1.07
CDRT1-202ENST00000354433 PHLDA1Q8WV24 401 aaPredicted RBP8.39□□□□□ -1.07
CDRT1-202ENST00000354433 FAM19A4Q96LR4 140 aa8.39□□□□□ -1.07
CDRT1-202ENST00000354433 C11orf68Q9H3H3 251 aaKnown RBP8.39□□□□□ -1.07
CDRT1-202ENST00000354433 SPINK4O60575 86 aa8.38□□□□□ -1.07
CDRT1-202ENST00000354433 RIGQ13278 110 aa8.38□□□□□ -1.07
CDRT1-202ENST00000354433 GATD1Q8NB37 220 aa8.38□□□□□ -1.07
CDRT1-202ENST00000354433 PGLYRP4Q96LB8 373 aa8.38□□□□□ -1.07
CDRT1-202ENST00000354433 ODF3Q96PU9 254 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms