RNA–Protein interactions for RNA: ENST00000353739.8

RNF38-203, Transcript of ring finger protein 38, humanhuman

TSL 1 (best) BASIC

Gene RNF38, Length 4,945 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-203ENST00000353739 FAM159AQ6UWV7 190 aa2.84□□□□□ -1.95
RNF38-203ENST00000353739 BRD3OSQ6XYD6 125 aa2.84□□□□□ -1.95
RNF38-203ENST00000353739 POM121L12Q8N7R1 296 aa2.84□□□□□ -1.95
RNF38-203ENST00000353739 TNCP24821 2201 aa2.84□□□□□ -1.95
RNF38-203ENST00000353739 IGHV3-66A0A0C4DH42 116 aa2.84□□□□□ -1.95
RNF38-203ENST00000353739 CMC4P56277 68 aaPredicted RBP2.84□□□□□ -1.95
RNF38-203ENST00000353739 RNF114Q9Y508 228 aa2.84□□□□□ -1.95
RNF38-203ENST00000353739 IGHV3OR16-10A0A075B7F0 116 aa2.84□□□□□ -1.96
RNF38-203ENST00000353739 A1L4Q6 167 aa2.84□□□□□ -1.96
RNF38-203ENST00000353739 CD5LO43866 347 aa2.84□□□□□ -1.96
RNF38-203ENST00000353739 EVI2AP22794 236 aa2.84□□□□□ -1.96
RNF38-203ENST00000353739 PSMB8P28062 276 aa2.84□□□□□ -1.96
RNF38-203ENST00000353739 ODF1Q14990 250 aa2.84□□□□□ -1.96
RNF38-203ENST00000353739 TAL2Q16559 108 aa2.84□□□□□ -1.96
RNF38-203ENST00000353739 Q6YL49 198 aa2.84□□□□□ -1.96
RNF38-203ENST00000353739 TMEM141Q96I45 108 aa2.84□□□□□ -1.96
RNF38-203ENST00000353739 UBE2E2Q96LR5 201 aa2.84□□□□□ -1.96
RNF38-203ENST00000353739 HIGD1BQ9P298 99 aa2.84□□□□□ -1.96
RNF38-203ENST00000353739 TIMM8BQ9Y5J9 83 aaPredicted RBP2.84□□□□□ -1.96
RNF38-203ENST00000353739 ZNF469Q96JG9 3925 aaPredicted RBP2.83□□□□□ -1.96
RNF38-203ENST00000353739 IGKV3D-20A0A0C4DH25 116 aa2.83□□□□□ -1.96
RNF38-203ENST00000353739 PRAC2D3DTV9 90 aa2.83□□□□□ -1.96
RNF38-203ENST00000353739 HLA-DMBP28068 263 aa2.83□□□□□ -1.96
RNF38-203ENST00000353739 RNASE4P34096 147 aaKnown RBP2.83□□□□□ -1.96
RNF38-203ENST00000353739 HERVK_113P61574 105 aa2.83□□□□□ -1.96
RNF38-203ENST00000353739 FOXI2Q6ZQN5 318 aa2.83□□□□□ -1.96
RNF38-203ENST00000353739 ATOH7Q8N100 152 aa2.83□□□□□ -1.96
RNF38-203ENST00000353739 COX11Q9Y6N1 276 aa2.83□□□□□ -1.96
RNF38-203ENST00000353739 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP2.83□□□□□ -1.96
RNF38-203ENST00000353739 H7C1H1 209 aa2.83□□□□□ -1.96
RNF38-203ENST00000353739 ZNF207O43670 478 aaKnown RBP2.83□□□□□ -1.96
RNF38-203ENST00000353739 NUDT3O95989 172 aa2.83□□□□□ -1.96
RNF38-203ENST00000353739 HINT1P49773 126 aaPredicted RBP2.83□□□□□ -1.96
RNF38-203ENST00000353739 TDRG1Q3Y452 100 aa2.83□□□□□ -1.96
RNF38-203ENST00000353739 PRSS1P07477 247 aa2.83□□□□□ -1.96
RNF38-203ENST00000353739 CD33P20138 364 aa2.83□□□□□ -1.96
RNF38-203ENST00000353739 DEFB113Q30KQ7 82 aa2.83□□□□□ -1.96
RNF38-203ENST00000353739 GTF2H5Q6ZYL4 71 aa2.83□□□□□ -1.96
RNF38-203ENST00000353739 ERASQ7Z444 233 aa2.83□□□□□ -1.96
RNF38-203ENST00000353739 PTH2Q96A98 100 aa2.83□□□□□ -1.96
RNF38-203ENST00000353739 TOMM6Q96B49 74 aa2.83□□□□□ -1.96
RNF38-203ENST00000353739 SMIM2Q9BVW6 85 aa2.83□□□□□ -1.96
RNF38-203ENST00000353739 COL6A6A6NMZ7 2263 aa2.83□□□□□ -1.96
RNF38-203ENST00000353739 MAP1AP78559 2803 aaPredicted RBP2.83□□□□□ -1.96
RNF38-203ENST00000353739 LINC01548A6NM66 108 aa2.83□□□□□ -1.96
RNF38-203ENST00000353739 KLLNB2CW77 178 aa2.83□□□□□ -1.96
RNF38-203ENST00000353739 LINC01619G3V211 115 aa2.83□□□□□ -1.96
RNF38-203ENST00000353739 H3BVH4 76 aa2.83□□□□□ -1.96
RNF38-203ENST00000353739 FSHBP01225 129 aa2.83□□□□□ -1.96
RNF38-203ENST00000353739 DEFB112Q30KQ8 113 aa2.83□□□□□ -1.96
RNF38-203ENST00000353739 PIK3CD-AS1Q5SR53 167 aa2.83□□□□□ -1.96
RNF38-203ENST00000353739 IGFL4Q6B9Z1 124 aa2.83□□□□□ -1.96
RNF38-203ENST00000353739 Q8N2B8 174 aa2.83□□□□□ -1.96
RNF38-203ENST00000353739 MTURNQ8N3F0 131 aa2.83□□□□□ -1.96
RNF38-203ENST00000353739 C20orf173Q96LM9 149 aa2.83□□□□□ -1.96
RNF38-203ENST00000353739 LINC00467Q9BRT7 94 aa2.83□□□□□ -1.96
RNF38-203ENST00000353739 ZMAT4Q9H898 229 aa2.83□□□□□ -1.96
RNF38-203ENST00000353739 A0A087WX48 190 aa2.82□□□□□ -1.96
RNF38-203ENST00000353739 IGHV3-35A0A0C4DH35 117 aa2.82□□□□□ -1.96
RNF38-203ENST00000353739 hDV102S1A0JD36 115 aa2.82□□□□□ -1.96
RNF38-203ENST00000353739 NPSP0C0P6 89 aa2.82□□□□□ -1.96
RNF38-203ENST00000353739 RNF224P0DH78 156 aa2.82□□□□□ -1.96
RNF38-203ENST00000353739 BVES-AS1Q5T3Y7 98 aa2.82□□□□□ -1.96
RNF38-203ENST00000353739 ZFAND2AQ8N6M9 145 aa2.82□□□□□ -1.96
RNF38-203ENST00000353739 C4orf3Q8WVX3 66 aa2.82□□□□□ -1.96
RNF38-203ENST00000353739 FOXC2Q99958 501 aa2.82□□□□□ -1.96
RNF38-203ENST00000353739 H3BRM9 83 aa2.82□□□□□ -1.96
RNF38-203ENST00000353739 NCR2O95944 276 aa2.82□□□□□ -1.96
RNF38-203ENST00000353739 MGPP08493 103 aa2.82□□□□□ -1.96
RNF38-203ENST00000353739 SMAGPQ0VAQ4 97 aa2.82□□□□□ -1.96
RNF38-203ENST00000353739 TMEM158Q8WZ71 300 aa2.82□□□□□ -1.96
RNF38-203ENST00000353739 JMJD8Q96S16 334 aa2.82□□□□□ -1.96
RNF38-203ENST00000353739 TMEM208Q9BTX3 173 aa2.82□□□□□ -1.96
RNF38-203ENST00000353739 TGFAP01135 160 aa2.82□□□□□ -1.96
RNF38-203ENST00000353739 IGHV3-11P01762 117 aa2.82□□□□□ -1.96
RNF38-203ENST00000353739 IGHV4-31P0DP07 118 aa2.82□□□□□ -1.96
RNF38-203ENST00000353739 SUMO2P61956 95 aaKnown RBP2.82□□□□□ -1.96
RNF38-203ENST00000353739 RHOHQ15669 191 aa2.82□□□□□ -1.96
RNF38-203ENST00000353739 ANXA2RQ3ZCQ2 193 aa2.82□□□□□ -1.96
RNF38-203ENST00000353739 NRACQ8N912 160 aa2.82□□□□□ -1.96
RNF38-203ENST00000353739 KIR2DL4Q99706 377 aa2.82□□□□□ -1.96
RNF38-203ENST00000353739 CSMD3Q7Z407 3707 aa2.82□□□□□ -1.96
RNF38-203ENST00000353739 IGLV2-18A0A075B6J9 118 aa2.82□□□□□ -1.96
RNF38-203ENST00000353739 IGHV3OR16-8A0A075B7F1 116 aa2.82□□□□□ -1.96
RNF38-203ENST00000353739 TRAV25A0A0B4J276 109 aa2.82□□□□□ -1.96
RNF38-203ENST00000353739 VCYO14598 125 aa2.82□□□□□ -1.96
RNF38-203ENST00000353739 UBE2V1Q13404 147 aa2.82□□□□□ -1.96
RNF38-203ENST00000353739 UNQ9165/PRO28630Q6UXU0 137 aa2.82□□□□□ -1.96
RNF38-203ENST00000353739 TRPT1Q86TN4 253 aaKnown RBP2.82□□□□□ -1.96
RNF38-203ENST00000353739 SCGB3A1Q96QR1 104 aa2.82□□□□□ -1.96
RNF38-203ENST00000353739 EDA2RQ9HAV5 297 aa2.82□□□□□ -1.96
RNF38-203ENST00000353739 CYSLTR1Q9Y271 337 aa2.82□□□□□ -1.96
RNF38-203ENST00000353739 IGHV3-49A0A0A0MS15 119 aa2.81□□□□□ -1.96
RNF38-203ENST00000353739 SMKR1H3BMG3 65 aa2.81□□□□□ -1.96
RNF38-203ENST00000353739 PF4P02776 101 aa2.81□□□□□ -1.96
RNF38-203ENST00000353739 CDKN1BP46527 198 aa2.81□□□□□ -1.96
RNF38-203ENST00000353739 PTTG1IPP53801 180 aa2.81□□□□□ -1.96
RNF38-203ENST00000353739 LINC00173Q6ZV60 143 aa2.81□□□□□ -1.96
RNF38-203ENST00000353739 RAX2Q96IS3 184 aa2.81□□□□□ -1.96
RNF38-203ENST00000353739 DUX5Q96PT3 197 aa2.81□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 136.8 ms