RNA–Protein interactions for RNA: ENST00000352993.7

BRCA1-201, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 3,668 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-201ENST00000352993 NDUFA11Q86Y39 141 aa5.9□□□□□ -1.46
BRCA1-201ENST00000352993 NTN5Q8WTR8 489 aaPredicted RBP5.9□□□□□ -1.46
BRCA1-201ENST00000352993 SPRY4Q9C004 299 aa5.9□□□□□ -1.46
BRCA1-201ENST00000352993 C21orf62Q9NYP8 219 aa5.9□□□□□ -1.46
BRCA1-201ENST00000352993 TRAV17A0A0B4J275 112 aa5.9□□□□□ -1.46
BRCA1-201ENST00000352993 TMEM178BH3BS89 294 aa5.9□□□□□ -1.46
BRCA1-201ENST00000352993 FCN3O75636 299 aa5.9□□□□□ -1.46
BRCA1-201ENST00000352993 DLX6P56179 175 aa5.9□□□□□ -1.46
BRCA1-201ENST00000352993 ORMDL2Q53FV1 153 aa5.9□□□□□ -1.46
BRCA1-201ENST00000352993 C2orf66Q6UXQ4 117 aa5.9□□□□□ -1.46
BRCA1-201ENST00000352993 SMIM2Q9BVW6 85 aa5.9□□□□□ -1.46
BRCA1-201ENST00000352993 TIMM23O14925 209 aa5.9□□□□□ -1.47
BRCA1-201ENST00000352993 C22orf34Q6ZV56 151 aa5.9□□□□□ -1.47
BRCA1-201ENST00000352993 AJUBAQ96IF1 538 aa5.9□□□□□ -1.47
BRCA1-201ENST00000352993 ARRDC1-AS1Q9H2J1 176 aa5.9□□□□□ -1.47
BRCA1-201ENST00000352993 SPTBN1Q01082 2364 aaKnown RBP5.89□□□□□ -1.47
BRCA1-201ENST00000352993 IGLV2-18A0A075B6J9 118 aa5.89□□□□□ -1.47
BRCA1-201ENST00000352993 BUB1B-PAK6H3BSN5 160 aa5.89□□□□□ -1.47
BRCA1-201ENST00000352993 RPL32P62910 135 aaKnown RBP5.89□□□□□ -1.47
BRCA1-201ENST00000352993 FAM159AQ6UWV7 190 aa5.89□□□□□ -1.47
BRCA1-201ENST00000352993 IGKV3D-20A0A0C4DH25 116 aa5.89□□□□□ -1.47
BRCA1-201ENST00000352993 THBDP07204 575 aa5.89□□□□□ -1.47
BRCA1-201ENST00000352993 Q6ZS92 163 aa5.89□□□□□ -1.47
BRCA1-201ENST00000352993 NRACQ8N912 160 aa5.89□□□□□ -1.47
BRCA1-201ENST00000352993 RPL39LQ96EH5 51 aaKnown RBP5.89□□□□□ -1.47
BRCA1-201ENST00000352993 PRO1854Q9UHT4 67 aa5.89□□□□□ -1.47
BRCA1-201ENST00000352993 TRAV2A0A0B4J234 112 aa5.89□□□□□ -1.47
BRCA1-201ENST00000352993 TRAV8-4A0A0B4J246 113 aa5.89□□□□□ -1.47
BRCA1-201ENST00000352993 CRLF1O75462 422 aa5.89□□□□□ -1.47
BRCA1-201ENST00000352993 CRYGBP07316 175 aa5.89□□□□□ -1.47
BRCA1-201ENST00000352993 C14orf178Q8N769 122 aaPredicted RBP5.89□□□□□ -1.47
BRCA1-201ENST00000352993 CFAP47Q6ZTR5 3102 aa5.89□□□□□ -1.47
BRCA1-201ENST00000352993 IGHV3-64A0A075B6Q5 118 aa5.88□□□□□ -1.47
BRCA1-201ENST00000352993 TRAV12-1A0A0B4J245 112 aa5.88□□□□□ -1.47
BRCA1-201ENST00000352993 LYNX1G3V0Z9 82 aa5.88□□□□□ -1.47
BRCA1-201ENST00000352993 LYNX1P0DP58 116 aa5.88□□□□□ -1.47
BRCA1-201ENST00000352993 UBE2D1P51668 147 aa5.88□□□□□ -1.47
BRCA1-201ENST00000352993 UBE2D3P61077 147 aa5.88□□□□□ -1.47
BRCA1-201ENST00000352993 SUMO2P61956 95 aaKnown RBP5.88□□□□□ -1.47
BRCA1-201ENST00000352993 UBE2D2P62837 147 aa5.88□□□□□ -1.47
BRCA1-201ENST00000352993 Q6ZQT7 251 aa5.88□□□□□ -1.47
BRCA1-201ENST00000352993 C15orf53Q8NAA6 179 aa5.88□□□□□ -1.47
BRCA1-201ENST00000352993 BAALCQ8WXS3 180 aa5.88□□□□□ -1.47
BRCA1-201ENST00000352993 TMEM190Q8WZ59 177 aa5.88□□□□□ -1.47
BRCA1-201ENST00000352993 TTC28Q96AY4 2481 aa5.88□□□□□ -1.47
BRCA1-201ENST00000352993 RHODO00212 210 aa5.88□□□□□ -1.47
BRCA1-201ENST00000352993 CRIP2P52943 208 aaPredicted RBP5.88□□□□□ -1.47
BRCA1-201ENST00000352993 MEIG1Q5JSS6 88 aa5.88□□□□□ -1.47
BRCA1-201ENST00000352993 C10orf126Q8N4M7 172 aa5.88□□□□□ -1.47
BRCA1-201ENST00000352993 C11orf21Q9P2W6 132 aa5.88□□□□□ -1.47
BRCA1-201ENST00000352993 NHLRC4P0CG21 123 aaPredicted RBP5.88□□□□□ -1.47
BRCA1-201ENST00000352993 CFC1BP0CG36 223 aa5.88□□□□□ -1.47
BRCA1-201ENST00000352993 CFC1P0CG37 223 aa5.88□□□□□ -1.47
BRCA1-201ENST00000352993 LGALS3P17931 250 aaKnown RBP5.88□□□□□ -1.47
BRCA1-201ENST00000352993 SEM1Q6ZVN7 128 aa5.88□□□□□ -1.47
BRCA1-201ENST00000352993 DMXL1Q9Y485 3027 aa5.88□□□□□ -1.47
BRCA1-201ENST00000352993 LINC01546A6NGU7 62 aa5.87□□□□□ -1.47
BRCA1-201ENST00000352993 NBR2O15453 112 aa5.87□□□□□ -1.47
BRCA1-201ENST00000352993 ADIPOQQ15848 244 aa5.87□□□□□ -1.47
BRCA1-201ENST00000352993 Q6ZS46 218 aa5.87□□□□□ -1.47
BRCA1-201ENST00000352993 NEXN-AS1Q8NBZ9 246 aa5.87□□□□□ -1.47
BRCA1-201ENST00000352993 RASL10AQ92737 203 aa5.87□□□□□ -1.47
BRCA1-201ENST00000352993 TIMD4Q96H15 378 aa5.87□□□□□ -1.47
BRCA1-201ENST00000352993 AGPAT4-IT1Q9H0P7 198 aa5.87□□□□□ -1.47
BRCA1-201ENST00000352993 PHLDA3Q9Y5J5 127 aa5.87□□□□□ -1.47
BRCA1-201ENST00000352993 LINC01619G3V211 115 aa5.87□□□□□ -1.47
BRCA1-201ENST00000352993 DEFB109BQ30KR1 87 aa5.87□□□□□ -1.47
BRCA1-201ENST00000352993 CNFNQ9BYD5 112 aa5.87□□□□□ -1.47
BRCA1-201ENST00000352993 SMAD5-AS1Q9Y6J3 95 aa5.87□□□□□ -1.47
BRCA1-201ENST00000352993 C11orf86A6NJI1 115 aa5.87□□□□□ -1.47
BRCA1-201ENST00000352993 F5H697 171 aa5.87□□□□□ -1.47
BRCA1-201ENST00000352993 CD7P09564 240 aa5.87□□□□□ -1.47
BRCA1-201ENST00000352993 C8orf31Q8N9H6 132 aa5.87□□□□□ -1.47
BRCA1-201ENST00000352993 AKAP6Q13023 2319 aa5.87□□□□□ -1.47
BRCA1-201ENST00000352993 A0A0J9YY99 117 aa5.86□□□□□ -1.47
BRCA1-201ENST00000352993 DUSP14O95147 198 aaKnown RBP5.86□□□□□ -1.47
BRCA1-201ENST00000352993 PRSS2P07478 247 aa5.86□□□□□ -1.47
BRCA1-201ENST00000352993 BSPH1Q075Z2 132 aa5.86□□□□□ -1.47
BRCA1-201ENST00000352993 Q8N1Y9 231 aa5.86□□□□□ -1.47
BRCA1-201ENST00000352993 TOMM6Q96B49 74 aa5.86□□□□□ -1.47
BRCA1-201ENST00000352993 MUC6Q6W4X9 2439 aa5.86□□□□□ -1.47
BRCA1-201ENST00000352993 TEX49A0A1B0GTD5 131 aa5.86□□□□□ -1.47
BRCA1-201ENST00000352993 A4D1N5 150 aa5.86□□□□□ -1.47
BRCA1-201ENST00000352993 ASIPP42127 132 aa5.86□□□□□ -1.47
BRCA1-201ENST00000352993 CITED1Q99966 193 aa5.86□□□□□ -1.47
BRCA1-201ENST00000352993 SLC50A1Q9BRV3 221 aa5.86□□□□□ -1.47
BRCA1-201ENST00000352993 FAM110AQ9BQ89 295 aa5.86□□□□□ -1.47
BRCA1-201ENST00000352993 IGLV1-47P01700 117 aa5.85□□□□□ -1.47
BRCA1-201ENST00000352993 SRD5A1P18405 259 aa5.85□□□□□ -1.47
BRCA1-201ENST00000352993 ZNF56Q15929 161 aa5.85□□□□□ -1.47
BRCA1-201ENST00000352993 ZNF575Q86XF7 245 aa5.85□□□□□ -1.47
BRCA1-201ENST00000352993 TP53TG1Q9Y2A0 90 aa5.85□□□□□ -1.47
BRCA1-201ENST00000352993 IGKV3-7A0A075B6H7 116 aa5.85□□□□□ -1.47
BRCA1-201ENST00000352993 MBD3L4A6NDZ8 208 aaPredicted RBP5.85□□□□□ -1.47
BRCA1-201ENST00000352993 MBD3L3A6NE82 208 aaPredicted RBP5.85□□□□□ -1.47
BRCA1-201ENST00000352993 MBD3L5A6NJ08 208 aaPredicted RBP5.85□□□□□ -1.47
BRCA1-201ENST00000352993 IGHG4P01861 327 aa5.85□□□□□ -1.47
BRCA1-201ENST00000352993 ECSCRQ19T08 205 aa5.85□□□□□ -1.47
BRCA1-201ENST00000352993 MBD3L2Q8NHZ7 208 aaPredicted RBP5.85□□□□□ -1.47
BRCA1-201ENST00000352993 FANCD2OSQ96PS1 177 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms