RNA–Protein interactions for RNA: ENST00000351691.9

TRAF3-202, Transcript of TNF receptor associated factor 3, humanhuman

TSL 1 (best) BASIC

Gene TRAF3, Length 2,239 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-202ENST00000351691 ICE1Q9Y2F5 2266 aa11.51□□□□□ -0.57
TRAF3-202ENST00000351691 NBEAQ8NFP9 2946 aa11.51□□□□□ -0.57
TRAF3-202ENST00000351691 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.51□□□□□ -0.57
TRAF3-202ENST00000351691 FBXL19-AS1Q494R0 122 aa11.51□□□□□ -0.57
TRAF3-202ENST00000351691 ZFP2Q6ZN57 461 aa11.51□□□□□ -0.57
TRAF3-202ENST00000351691 RHODO00212 210 aa11.5□□□□□ -0.57
TRAF3-202ENST00000351691 COX6B1P14854 86 aa11.5□□□□□ -0.57
TRAF3-202ENST00000351691 ERCC8Q13216 396 aa11.5□□□□□ -0.57
TRAF3-202ENST00000351691 PRR30Q53SZ7 412 aaPredicted RBP11.5□□□□□ -0.57
TRAF3-202ENST00000351691 IGFBPL1Q8WX77 278 aa11.5□□□□□ -0.57
TRAF3-202ENST00000351691 PRADC1Q9BSG0 188 aa11.5□□□□□ -0.57
TRAF3-202ENST00000351691 SMIM2Q9BVW6 85 aa11.5□□□□□ -0.57
TRAF3-202ENST00000351691 EFNA4P52798 201 aa11.5□□□□□ -0.57
TRAF3-202ENST00000351691 CACNA1AO00555 2505 aa11.49□□□□□ -0.57
TRAF3-202ENST00000351691 ZNF815PA8K554 130 aa11.49□□□□□ -0.57
TRAF3-202ENST00000351691 CNIH1O95406 144 aa11.49□□□□□ -0.57
TRAF3-202ENST00000351691 Q6Q795 121 aa11.49□□□□□ -0.57
TRAF3-202ENST00000351691 NDUFA11Q86Y39 141 aa11.49□□□□□ -0.57
TRAF3-202ENST00000351691 PTH2Q96A98 100 aa11.49□□□□□ -0.57
TRAF3-202ENST00000351691 SCGB3A1Q96QR1 104 aa11.49□□□□□ -0.57
TRAF3-202ENST00000351691 SLC50A1Q9BRV3 221 aa11.49□□□□□ -0.57
TRAF3-202ENST00000351691 SMAD5-AS1Q9Y6J3 95 aa11.49□□□□□ -0.57
TRAF3-202ENST00000351691 LY6LH3BQJ8 138 aa11.48□□□□□ -0.57
TRAF3-202ENST00000351691 TCL1BO95988 128 aa11.48□□□□□ -0.57
TRAF3-202ENST00000351691 TRGV3P03979 118 aa11.48□□□□□ -0.57
TRAF3-202ENST00000351691 FAM110AQ9BQ89 295 aa11.48□□□□□ -0.57
TRAF3-202ENST00000351691 SCGB2A1O75556 95 aa11.48□□□□□ -0.57
TRAF3-202ENST00000351691 NHLRC4P0CG21 123 aaPredicted RBP11.48□□□□□ -0.57
TRAF3-202ENST00000351691 SRSF9Q13242 221 aaKnown RBP eCLIP11.48□□□□□ -0.57
TRAF3-202ENST00000351691 CFHR4Q92496 578 aa11.48□□□□□ -0.57
TRAF3-202ENST00000351691 UFC1Q9Y3C8 167 aa11.48□□□□□ -0.57
TRAF3-202ENST00000351691 IGLV11-55A0A075B6I3 123 aa11.47□□□□□ -0.57
TRAF3-202ENST00000351691 IGKV3D-20A0A0C4DH25 116 aa11.47□□□□□ -0.57
TRAF3-202ENST00000351691 ANKRD29Q8N6D5 301 aa11.47□□□□□ -0.57
TRAF3-202ENST00000351691 LY6G5BQ8NDX9 201 aa11.47□□□□□ -0.57
TRAF3-202ENST00000351691 LINC01600Q96MT4 127 aa11.47□□□□□ -0.57
TRAF3-202ENST00000351691 SPTA1P02549 2419 aa11.47□□□□□ -0.57
TRAF3-202ENST00000351691 IGHV7-4-1A0A0J9YVY3 117 aa11.47□□□□□ -0.57
TRAF3-202ENST00000351691 F8W735 103 aaPredicted RBP11.47□□□□□ -0.57
TRAF3-202ENST00000351691 SCGB1D4Q6XE38 83 aa11.47□□□□□ -0.57
TRAF3-202ENST00000351691 DYNAPQ8N1N2 210 aa11.46□□□□□ -0.57
TRAF3-202ENST00000351691 PAPPA-AS1Q5QFB9 102 aa11.45□□□□□ -0.58
TRAF3-202ENST00000351691 FANCD2OSQ96PS1 177 aa11.45□□□□□ -0.58
TRAF3-202ENST00000351691 MALRD1Q5VYJ5 2156 aa11.45□□□□□ -0.58
TRAF3-202ENST00000351691 B5MCH6 92 aa11.45□□□□□ -0.58
TRAF3-202ENST00000351691 NDUFV3P56181 108 aaKnown RBP11.45□□□□□ -0.58
TRAF3-202ENST00000351691 C10orf126Q8N4M7 172 aa11.45□□□□□ -0.58
TRAF3-202ENST00000351691 BAALCQ8WXS3 180 aa11.45□□□□□ -0.58
TRAF3-202ENST00000351691 PLEKHB2Q96CS7 222 aa11.45□□□□□ -0.58
TRAF3-202ENST00000351691 COL6A6A6NMZ7 2263 aa11.45□□□□□ -0.58
TRAF3-202ENST00000351691 TPRP12270 2363 aaKnown RBP11.44□□□□□ -0.58
TRAF3-202ENST00000351691 CENPVL3A0A0U1RRI6 287 aa11.44□□□□□ -0.58
TRAF3-202ENST00000351691 GAGE12JA6NER3 117 aa11.44□□□□□ -0.58
TRAF3-202ENST00000351691 GAGE7O76087 117 aa11.44□□□□□ -0.58
TRAF3-202ENST00000351691 GAGE12FP0CL80 117 aa11.44□□□□□ -0.58
TRAF3-202ENST00000351691 GAGE12GP0CL81 117 aa11.44□□□□□ -0.58
TRAF3-202ENST00000351691 GAGE12IP0CL82 117 aa11.44□□□□□ -0.58
TRAF3-202ENST00000351691 SCGB1C2P0DMR2 95 aa11.44□□□□□ -0.58
TRAF3-202ENST00000351691 COX7A1P24310 79 aa11.44□□□□□ -0.58
TRAF3-202ENST00000351691 GAGE2BQ13066 116 aa11.44□□□□□ -0.58
TRAF3-202ENST00000351691 GAGE4Q13068 117 aa11.44□□□□□ -0.58
TRAF3-202ENST00000351691 GAGE2EQ4V326 116 aa11.44□□□□□ -0.58
TRAF3-202ENST00000351691 NPBQ8NG41 125 aa11.44□□□□□ -0.58
TRAF3-202ENST00000351691 AJUBAQ96IF1 538 aa11.44□□□□□ -0.58
TRAF3-202ENST00000351691 RAX2Q96IS3 184 aa11.44□□□□□ -0.58
TRAF3-202ENST00000351691 C21orf62Q9NYP8 219 aa11.44□□□□□ -0.58
TRAF3-202ENST00000351691 GAGE2DQ9UEU5 116 aa11.44□□□□□ -0.58
TRAF3-202ENST00000351691 ITPR1Q14643 2758 aa11.44□□□□□ -0.58
TRAF3-202ENST00000351691 A0A0J9YY99 117 aa11.44□□□□□ -0.58
TRAF3-202ENST00000351691 HLA-DMBP28068 263 aa11.44□□□□□ -0.58
TRAF3-202ENST00000351691 UCNP55089 124 aa11.44□□□□□ -0.58
TRAF3-202ENST00000351691 TMEM95Q3KNT9 176 aa11.44□□□□□ -0.58
TRAF3-202ENST00000351691 LINC01560Q8TB33 94 aa11.44□□□□□ -0.58
TRAF3-202ENST00000351691 HIF1ANQ9NWT6 349 aa11.44□□□□□ -0.58
TRAF3-202ENST00000351691 RELNP78509 3460 aa11.44□□□□□ -0.58
TRAF3-202ENST00000351691 TRAV26-2A0A0B4J265 109 aa11.43□□□□□ -0.58
TRAF3-202ENST00000351691 LYNX1G3V0Z9 82 aa11.43□□□□□ -0.58
TRAF3-202ENST00000351691 NBR2O15453 112 aa11.43□□□□□ -0.58
TRAF3-202ENST00000351691 LYNX1P0DP58 116 aa11.43□□□□□ -0.58
TRAF3-202ENST00000351691 HERVK_113P61574 105 aa11.43□□□□□ -0.58
TRAF3-202ENST00000351691 RASL10AQ92737 203 aa11.43□□□□□ -0.58
TRAF3-202ENST00000351691 MRPL53Q96EL3 112 aaKnown RBP11.43□□□□□ -0.58
TRAF3-202ENST00000351691 C11orf21Q9P2W6 132 aa11.43□□□□□ -0.58
TRAF3-202ENST00000351691 NBASA2RRP1 2371 aa11.43□□□□□ -0.58
TRAF3-202ENST00000351691 TRBV7-9A0A0J9YWB2 115 aa11.43□□□□□ -0.58
TRAF3-202ENST00000351691 LINC01548A6NM66 108 aa11.43□□□□□ -0.58
TRAF3-202ENST00000351691 FAM90A27PA6NNH2 459 aa11.43□□□□□ -0.58
TRAF3-202ENST00000351691 CFC1BP0CG36 223 aa11.43□□□□□ -0.58
TRAF3-202ENST00000351691 CFC1P0CG37 223 aa11.43□□□□□ -0.58
TRAF3-202ENST00000351691 DPM3Q9P2X0 92 aa11.43□□□□□ -0.58
TRAF3-202ENST00000351691 M0R1W7 72 aa11.42□□□□□ -0.58
TRAF3-202ENST00000351691 M0R381 172 aa11.42□□□□□ -0.58
TRAF3-202ENST00000351691 SNCGO76070 127 aa11.42□□□□□ -0.58
TRAF3-202ENST00000351691 IGHV3-30P01768 117 aa11.42□□□□□ -0.58
TRAF3-202ENST00000351691 IGHV3-30-5P0DP03 117 aa11.42□□□□□ -0.58
TRAF3-202ENST00000351691 SUMO2P61956 95 aaKnown RBP11.42□□□□□ -0.58
TRAF3-202ENST00000351691 TIMD4Q96H15 378 aa11.42□□□□□ -0.58
TRAF3-202ENST00000351691 PRO1854Q9UHT4 67 aa11.42□□□□□ -0.58
TRAF3-202ENST00000351691 SPANXN1Q5VSR9 72 aa11.41□□□□□ -0.58
TRAF3-202ENST00000351691 KIR2DL4Q99706 377 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms