RNA–Protein interactions for RNA: ENST00000351205.8

SMN1-201, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMN1, Length 900 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-201ENST00000351205 OR4C5Q8NGB2 326 aa11.41□□□□□ -0.58
SMN1-201ENST00000351205 TXNDC17Q9BRA2 123 aa11.41□□□□□ -0.58
SMN1-201ENST00000351205 WFDC1Q9HC57 220 aa11.41□□□□□ -0.58
SMN1-201ENST00000351205 TRAV8-1A0A0A6YYK1 113 aa11.4□□□□□ -0.58
SMN1-201ENST00000351205 IGHV3-16A0A0C4DH30 117 aa11.4□□□□□ -0.58
SMN1-201ENST00000351205 LOC100131303A0A0U1RQF7 123 aa11.4□□□□□ -0.58
SMN1-201ENST00000351205 F6UZH7 168 aa11.4□□□□□ -0.58
SMN1-201ENST00000351205 K7EP13 123 aa11.4□□□□□ -0.58
SMN1-201ENST00000351205 TYMSP04818 313 aa11.4□□□□□ -0.58
SMN1-201ENST00000351205 XGP55808 180 aa11.4□□□□□ -0.58
SMN1-201ENST00000351205 FAM74A1Q5RGS3 127 aa11.4□□□□□ -0.58
SMN1-201ENST00000351205 TVP23CQ96ET8 276 aa11.4□□□□□ -0.58
SMN1-201ENST00000351205 TRAV21A0A0B4J279 112 aa11.39□□□□□ -0.59
SMN1-201ENST00000351205 KRTAP10-1P60331 282 aa11.39□□□□□ -0.59
SMN1-201ENST00000351205 RAB2AP61019 212 aa11.39□□□□□ -0.59
SMN1-201ENST00000351205 ACOT6Q3I5F7 207 aaPredicted RBP11.39□□□□□ -0.59
SMN1-201ENST00000351205 PQLC2Q6ZP29 291 aa11.39□□□□□ -0.59
SMN1-201ENST00000351205 A0A1W2PPV4 95 aa11.38□□□□□ -0.59
SMN1-201ENST00000351205 HMGB3O15347 200 aaKnown RBP11.38□□□□□ -0.59
SMN1-201ENST00000351205 CRYGDP07320 174 aa11.38□□□□□ -0.59
SMN1-201ENST00000351205 GNG5P63218 68 aa11.38□□□□□ -0.59
SMN1-201ENST00000351205 ARL6IP6Q8N6S5 226 aa11.38□□□□□ -0.59
SMN1-201ENST00000351205 TREM1Q9NP99 234 aa11.38□□□□□ -0.59
SMN1-201ENST00000351205 GATA1P15976 413 aaPredicted RBP11.37□□□□□ -0.59
SMN1-201ENST00000351205 NHLRC2Q8NBF2 726 aa11.37□□□□□ -0.59
SMN1-201ENST00000351205 SDF2L1Q9HCN8 221 aa11.37□□□□□ -0.59
SMN1-201ENST00000351205 VPS13BQ7Z7G8 4022 aa11.37□□□□□ -0.59
SMN1-201ENST00000351205 C10orf126Q8N4M7 172 aa11.36□□□□□ -0.59
SMN1-201ENST00000351205 ASB13Q8WXK3 278 aa11.36□□□□□ -0.59
SMN1-201ENST00000351205 KCNS1Q96KK3 526 aa11.36□□□□□ -0.59
SMN1-201ENST00000351205 SGK494Q96LW2 274 aa11.36□□□□□ -0.59
SMN1-201ENST00000351205 ARL14EPLP0DKL9 152 aa11.35□□□□□ -0.59
SMN1-201ENST00000351205 SH2D6Q7Z4S9 175 aa11.35□□□□□ -0.59
SMN1-201ENST00000351205 OR10G9Q8NGN4 311 aa11.35□□□□□ -0.59
SMN1-201ENST00000351205 OR10G7Q8NGN6 311 aa11.35□□□□□ -0.59
SMN1-201ENST00000351205 DNAH8Q96JB1 4490 aa11.34□□□□□ -0.59
SMN1-201ENST00000351205 IGHV3-38A0A0C4DH36 116 aa11.34□□□□□ -0.59
SMN1-201ENST00000351205 FBLL1A6NHQ2 334 aaKnown RBP11.34□□□□□ -0.59
SMN1-201ENST00000351205 PPT1P50897 306 aa11.34□□□□□ -0.59
SMN1-201ENST00000351205 TIRAPP58753 221 aa11.34□□□□□ -0.59
SMN1-201ENST00000351205 DEFA1P59665 94 aa11.34□□□□□ -0.59
SMN1-201ENST00000351205 DEFA3P59666 94 aa11.34□□□□□ -0.59
SMN1-201ENST00000351205 Q5VSD8 79 aa11.34□□□□□ -0.59
SMN1-201ENST00000351205 SLC25A29Q8N8R3 303 aa11.34□□□□□ -0.59
SMN1-201ENST00000351205 MYCBP2O75592 4640 aa11.34□□□□□ -0.59
SMN1-201ENST00000351205 DMBT1Q9UGM3 2413 aaPredicted RBP11.33□□□□□ -0.6
SMN1-201ENST00000351205 A6NHS1 94 aa11.33□□□□□ -0.6
SMN1-201ENST00000351205 GCSHP23434 173 aa11.33□□□□□ -0.6
SMN1-201ENST00000351205 CDC34P49427 236 aaPredicted RBP11.33□□□□□ -0.6
SMN1-201ENST00000351205 ZNF80P51504 273 aaPredicted RBP11.33□□□□□ -0.6
SMN1-201ENST00000351205 ZNF876PQ49A33 203 aa11.33□□□□□ -0.6
SMN1-201ENST00000351205 DPPA3Q6W0C5 159 aa11.33□□□□□ -0.6
SMN1-201ENST00000351205 NDFIP1Q9BT67 221 aa11.33□□□□□ -0.6
SMN1-201ENST00000351205 C11orf21Q9P2W6 132 aa11.33□□□□□ -0.6
SMN1-201ENST00000351205 TCRAP04437 139 aa11.32□□□□□ -0.6
SMN1-201ENST00000351205 STAG3L2P0CL84 134 aa11.32□□□□□ -0.6
SMN1-201ENST00000351205 STAG3L3P0CL85 134 aa11.32□□□□□ -0.6
SMN1-201ENST00000351205 INAFM2P0DMQ5 153 aa11.32□□□□□ -0.6
SMN1-201ENST00000351205 LINC01556Q5JQF7 62 aa11.32□□□□□ -0.6
SMN1-201ENST00000351205 CFAP126Q5VTH2 177 aa11.32□□□□□ -0.6
SMN1-201ENST00000351205 C5orf17Q8NAS9 161 aa11.32□□□□□ -0.6
SMN1-201ENST00000351205 SERTM2A0A1B0GWG4 89 aa11.31□□□□□ -0.6
SMN1-201ENST00000351205 RS1O15537 224 aa11.31□□□□□ -0.6
SMN1-201ENST00000351205 PSCAO43653 123 aa11.31□□□□□ -0.6
SMN1-201ENST00000351205 GCGP01275 180 aa11.31□□□□□ -0.6
SMN1-201ENST00000351205 PFN1P07737 140 aaKnown RBP11.31□□□□□ -0.6
SMN1-201ENST00000351205 TMEM75Q8N9X5 138 aa11.31□□□□□ -0.6
SMN1-201ENST00000351205 HSD17B11Q8NBQ5 300 aa11.31□□□□□ -0.6
SMN1-201ENST00000351205 OR2G3Q8NGZ4 309 aa11.31□□□□□ -0.6
SMN1-201ENST00000351205 FRZBQ92765 325 aa11.31□□□□□ -0.6
SMN1-201ENST00000351205 IGHV3-73A0A0B4J1V6 119 aa11.3□□□□□ -0.6
SMN1-201ENST00000351205 TRAV8-6A0A0B4J262 113 aa11.3□□□□□ -0.6
SMN1-201ENST00000351205 LRCOL1A6NCL2 159 aa11.3□□□□□ -0.6
SMN1-201ENST00000351205 IBA57-AS1B1ANH7 110 aa11.3□□□□□ -0.6
SMN1-201ENST00000351205 GCHFRP30047 84 aa11.3□□□□□ -0.6
SMN1-201ENST00000351205 RHOHQ15669 191 aa11.3□□□□□ -0.6
SMN1-201ENST00000351205 OR10J3Q5JRS4 329 aa11.3□□□□□ -0.6
SMN1-201ENST00000351205 SUN5Q8TC36 379 aa11.3□□□□□ -0.6
SMN1-201ENST00000351205 RAB24Q969Q5 203 aa11.3□□□□□ -0.6
SMN1-201ENST00000351205 C9orf85Q96MD7 179 aa11.3□□□□□ -0.6
SMN1-201ENST00000351205 PRADC1Q9BSG0 188 aa11.3□□□□□ -0.6
SMN1-201ENST00000351205 PSG8Q9UQ74 426 aa11.3□□□□□ -0.6
SMN1-201ENST00000351205 SRRM2Q9UQ35 2752 aaKnown RBP11.29□□□□□ -0.6
SMN1-201ENST00000351205 IGLV5-52A0A0A0MRZ9 124 aa11.29□□□□□ -0.6
SMN1-201ENST00000351205 TRBV6-4A0A1B0GX49 114 aa11.29□□□□□ -0.6
SMN1-201ENST00000351205 TAAR5O14804 337 aa11.29□□□□□ -0.6
SMN1-201ENST00000351205 IGLV2-11P01706 119 aa11.29□□□□□ -0.6
SMN1-201ENST00000351205 SMR3BP02814 79 aaPredicted RBP11.29□□□□□ -0.6
SMN1-201ENST00000351205 HAMPP81172 84 aa11.29□□□□□ -0.6
SMN1-201ENST00000351205 Q9HAA7 133 aa11.29□□□□□ -0.6
SMN1-201ENST00000351205 ALG5Q9Y673 324 aa11.29□□□□□ -0.6
SMN1-201ENST00000351205 GGTLC3B5MD39 225 aa11.28□□□□□ -0.6
SMN1-201ENST00000351205 K7EQM0 130 aa11.28□□□□□ -0.6
SMN1-201ENST00000351205 CIDEAO60543 219 aa11.28□□□□□ -0.6
SMN1-201ENST00000351205 ATP6V0CP27449 155 aa11.28□□□□□ -0.6
SMN1-201ENST00000351205 FLI1Q01543 452 aaPredicted RBP11.28□□□□□ -0.6
SMN1-201ENST00000351205 ZNF506Q5JVG8 444 aa11.28□□□□□ -0.6
SMN1-201ENST00000351205 PSMG3Q9BT73 122 aaPredicted RBP11.28□□□□□ -0.6
SMN1-201ENST00000351205 PGPEP1LA6NFU8 196 aa11.27□□□□□ -0.61
SMN1-201ENST00000351205 IGHV3-30P01768 117 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms