RNA–Protein interactions for RNA: ENST00000348987.4

SCARF1-202, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best) BASIC

Gene SCARF1, Length 2,619 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-202ENST00000348987 OR11H2Q8NH07 326 aa14.4□□□□□ -0.1
SCARF1-202ENST00000348987 PSMG3-AS1Q96PY0 264 aa14.4□□□□□ -0.1
SCARF1-202ENST00000348987 ONECUT1Q9UBC0 465 aa14.4□□□□□ -0.1
SCARF1-202ENST00000348987 PLNP26678 52 aa14.4□□□□□ -0.1
SCARF1-202ENST00000348987 CARD19Q96LW7 228 aa14.39□□□□□ -0.11
SCARF1-202ENST00000348987 FABP5P3A8MUU1 101 aa14.38□□□□□ -0.11
SCARF1-202ENST00000348987 C5orf64Q2M2E5 130 aa14.38□□□□□ -0.11
SCARF1-202ENST00000348987 LY6LH3BQJ8 138 aa14.38□□□□□ -0.11
SCARF1-202ENST00000348987 IGHG4P01861 327 aa14.38□□□□□ -0.11
SCARF1-202ENST00000348987 LGALS1P09382 135 aaKnown RBP14.38□□□□□ -0.11
SCARF1-202ENST00000348987 ERCC8Q13216 396 aa14.38□□□□□ -0.11
SCARF1-202ENST00000348987 ZNF672Q499Z4 452 aaPredicted RBP14.38□□□□□ -0.11
SCARF1-202ENST00000348987 PRSS29PA6NIE9 313 aa14.37□□□□□ -0.11
SCARF1-202ENST00000348987 ANAPC13Q9BS18 74 aa14.37□□□□□ -0.11
SCARF1-202ENST00000348987 KLK15Q9H2R5 256 aa14.37□□□□□ -0.11
SCARF1-202ENST00000348987 CELSR1Q9NYQ6 3014 aa14.37□□□□□ -0.11
SCARF1-202ENST00000348987 F8VRH5 84 aa14.36□□□□□ -0.11
SCARF1-202ENST00000348987 NRACQ8N912 160 aa14.36□□□□□ -0.11
SCARF1-202ENST00000348987 LINC01619G3V211 115 aa14.36□□□□□ -0.11
SCARF1-202ENST00000348987 H7C1H1 209 aa14.36□□□□□ -0.11
SCARF1-202ENST00000348987 TMEM78Q5T7P6 136 aa14.35□□□□□ -0.11
SCARF1-202ENST00000348987 CFHR4Q92496 578 aa14.35□□□□□ -0.11
SCARF1-202ENST00000348987 VKORC1Q9BQB6 163 aa14.35□□□□□ -0.11
SCARF1-202ENST00000348987 MAP1AP78559 2803 aaPredicted RBP14.35□□□□□ -0.11
SCARF1-202ENST00000348987 CCL21O00585 134 aa14.35□□□□□ -0.11
SCARF1-202ENST00000348987 PPDPFLQ8WWR9 84 aa14.35□□□□□ -0.11
SCARF1-202ENST00000348987 UFC1Q9Y3C8 167 aa14.35□□□□□ -0.11
SCARF1-202ENST00000348987 ITPR1Q14643 2758 aa14.35□□□□□ -0.11
SCARF1-202ENST00000348987 DYNAPQ8N1N2 210 aa14.34□□□□□ -0.11
SCARF1-202ENST00000348987 SMAD5-AS1Q9Y6J3 95 aa14.34□□□□□ -0.11
SCARF1-202ENST00000348987 IGHV3OR16-8A0A075B7F1 116 aa14.34□□□□□ -0.11
SCARF1-202ENST00000348987 IGHV3-23P01764 117 aa14.34□□□□□ -0.11
SCARF1-202ENST00000348987 SRSF2Q01130 221 aaKnown RBP14.34□□□□□ -0.11
SCARF1-202ENST00000348987 TEN1Q86WV5 123 aa14.34□□□□□ -0.11
SCARF1-202ENST00000348987 VPS13CQ709C8 3753 aa14.33□□□□□ -0.11
SCARF1-202ENST00000348987 HIVEP3Q5T1R4 2406 aa14.33□□□□□ -0.11
SCARF1-202ENST00000348987 RPL7P18124 248 aaKnown RBP14.33□□□□□ -0.11
SCARF1-202ENST00000348987 MSRB2Q9Y3D2 182 aa14.33□□□□□ -0.11
SCARF1-202ENST00000348987 IGKV3D-20A0A0C4DH25 116 aa14.33□□□□□ -0.12
SCARF1-202ENST00000348987 PRAC2D3DTV9 90 aa14.33□□□□□ -0.12
SCARF1-202ENST00000348987 SRSF9Q13242 221 aaKnown RBP eCLIP14.33□□□□□ -0.12
SCARF1-202ENST00000348987 PLEKHB2Q96CS7 222 aa14.33□□□□□ -0.12
SCARF1-202ENST00000348987 KIR2DL4Q99706 377 aa14.33□□□□□ -0.12
SCARF1-202ENST00000348987 TGFAP01135 160 aa14.32□□□□□ -0.12
SCARF1-202ENST00000348987 SCGB1D4Q6XE38 83 aa14.32□□□□□ -0.12
SCARF1-202ENST00000348987 IL17RELQ6ZVW7 336 aa14.32□□□□□ -0.12
SCARF1-202ENST00000348987 RAB1BQ9H0U4 201 aa14.32□□□□□ -0.12
SCARF1-202ENST00000348987 C11orf21Q9P2W6 132 aa14.32□□□□□ -0.12
SCARF1-202ENST00000348987 A6NJY4 79 aa14.31□□□□□ -0.12
SCARF1-202ENST00000348987 ZNF815PA8K554 130 aa14.31□□□□□ -0.12
SCARF1-202ENST00000348987 UBE2D1P51668 147 aa14.31□□□□□ -0.12
SCARF1-202ENST00000348987 UBE2D3P61077 147 aa14.31□□□□□ -0.12
SCARF1-202ENST00000348987 UBE2D2P62837 147 aa14.31□□□□□ -0.12
SCARF1-202ENST00000348987 PRADC1Q9BSG0 188 aa14.31□□□□□ -0.12
SCARF1-202ENST00000348987 TRAV12-1A0A0B4J245 112 aa14.31□□□□□ -0.12
SCARF1-202ENST00000348987 B5MCH6 92 aa14.31□□□□□ -0.12
SCARF1-202ENST00000348987 H3BVH4 76 aa14.31□□□□□ -0.12
SCARF1-202ENST00000348987 HES1Q14469 280 aa14.31□□□□□ -0.12
SCARF1-202ENST00000348987 F8W735 103 aaPredicted RBP14.3□□□□□ -0.12
SCARF1-202ENST00000348987 NBR2O15453 112 aa14.3□□□□□ -0.12
SCARF1-202ENST00000348987 TCL1BO95988 128 aa14.3□□□□□ -0.12
SCARF1-202ENST00000348987 GAGE5Q13069 117 aa14.3□□□□□ -0.12
SCARF1-202ENST00000348987 GAGE6Q13070 117 aa14.3□□□□□ -0.12
SCARF1-202ENST00000348987 SCGB3A1Q96QR1 104 aa14.3□□□□□ -0.12
SCARF1-202ENST00000348987 ZFAND6Q6FIF0 208 aa14.3□□□□□ -0.12
SCARF1-202ENST00000348987 LY6G5BQ8NDX9 201 aa14.3□□□□□ -0.12
SCARF1-202ENST00000348987 DPM3Q9P2X0 92 aa14.3□□□□□ -0.12
SCARF1-202ENST00000348987 IGHV3-35A0A0C4DH35 117 aa14.29□□□□□ -0.12
SCARF1-202ENST00000348987 ZNF688P0C7X2 276 aa14.29□□□□□ -0.12
SCARF1-202ENST00000348987 MFAP4P55083 255 aa14.29□□□□□ -0.12
SCARF1-202ENST00000348987 NDPQ00604 133 aa14.29□□□□□ -0.12
SCARF1-202ENST00000348987 RNF182Q8N6D2 247 aa14.29□□□□□ -0.12
SCARF1-202ENST00000348987 TEX29Q8N6K0 151 aa14.29□□□□□ -0.12
SCARF1-202ENST00000348987 KLHL30-AS1Q8NEE0 82 aa14.29□□□□□ -0.12
SCARF1-202ENST00000348987 SLC25A16P16260 332 aa14.28□□□□□ -0.12
SCARF1-202ENST00000348987 FANCD2OSQ96PS1 177 aa14.28□□□□□ -0.12
SCARF1-202ENST00000348987 SRSF8Q9BRL6 282 aaKnown RBP14.28□□□□□ -0.12
SCARF1-202ENST00000348987 ADORA2A-AS1P86434 159 aa14.28□□□□□ -0.12
SCARF1-202ENST00000348987 NEXN-AS1Q8NBZ9 246 aa14.28□□□□□ -0.12
SCARF1-202ENST00000348987 RNF5Q99942 180 aa14.28□□□□□ -0.12
SCARF1-202ENST00000348987 CD7P09564 240 aa14.28□□□□□ -0.12
SCARF1-202ENST00000348987 ANXA2RQ3ZCQ2 193 aa14.28□□□□□ -0.12
SCARF1-202ENST00000348987 Q6ZQT7 251 aa14.28□□□□□ -0.12
SCARF1-202ENST00000348987 A8MWV9 139 aa14.27□□□□□ -0.13
SCARF1-202ENST00000348987 ANKRD29Q8N6D5 301 aa14.27□□□□□ -0.13
SCARF1-202ENST00000348987 NDUFA11Q86Y39 141 aa14.27□□□□□ -0.13
SCARF1-202ENST00000348987 OR11H6Q8NGC7 330 aa14.27□□□□□ -0.13
SCARF1-202ENST00000348987 IGHV7-4-1A0A0J9YVY3 117 aa14.26□□□□□ -0.13
SCARF1-202ENST00000348987 SPANXN1Q5VSR9 72 aa14.26□□□□□ -0.13
SCARF1-202ENST00000348987 SMIM2Q9BVW6 85 aa14.26□□□□□ -0.13
SCARF1-202ENST00000348987 NHLRC4P0CG21 123 aaPredicted RBP14.26□□□□□ -0.13
SCARF1-202ENST00000348987 VCX2Q9H322 139 aa14.26□□□□□ -0.13
SCARF1-202ENST00000348987 C21orf62Q9NYP8 219 aa14.26□□□□□ -0.13
SCARF1-202ENST00000348987 IGLV11-55A0A075B6I3 123 aa14.25□□□□□ -0.13
SCARF1-202ENST00000348987 LY6DQ14210 128 aa14.25□□□□□ -0.13
SCARF1-202ENST00000348987 RASL10AQ92737 203 aa14.25□□□□□ -0.13
SCARF1-202ENST00000348987 TOMM6Q96B49 74 aa14.25□□□□□ -0.13
SCARF1-202ENST00000348987 COX6B1P14854 86 aa14.24□□□□□ -0.13
SCARF1-202ENST00000348987 NPBQ8NG41 125 aa14.24□□□□□ -0.13
SCARF1-202ENST00000348987 BAALCQ8WXS3 180 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms