RNA–Protein interactions for RNA: ENST00000348639.7

CHRNA3-202, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 1 (best) BASIC

Gene CHRNA3, Length 2,030 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-202ENST00000348639 IGHV4OR15-8A0A075B7B6 117 aa15.33■□□□□ 0.04
CHRNA3-202ENST00000348639 A0A087WW49 117 aa15.33■□□□□ 0.04
CHRNA3-202ENST00000348639 SMKR1H3BMG3 65 aa15.33■□□□□ 0.04
CHRNA3-202ENST00000348639 J3KRW8 73 aa15.33■□□□□ 0.04
CHRNA3-202ENST00000348639 NPYP01303 97 aa15.33■□□□□ 0.04
CHRNA3-202ENST00000348639 PDZD2O15018 2839 aa15.33■□□□□ 0.04
CHRNA3-202ENST00000348639 ATOH7Q8N100 152 aa15.33■□□□□ 0.04
CHRNA3-202ENST00000348639 TEX29Q8N6K0 151 aa15.33■□□□□ 0.04
CHRNA3-202ENST00000348639 MAP1LC3CQ9BXW4 147 aa15.33■□□□□ 0.04
CHRNA3-202ENST00000348639 LAMTOR2Q9Y2Q5 125 aa15.33■□□□□ 0.04
CHRNA3-202ENST00000348639 NCR2O95944 276 aa15.32■□□□□ 0.04
CHRNA3-202ENST00000348639 SYNJ2BPP57105 145 aa15.32■□□□□ 0.04
CHRNA3-202ENST00000348639 CACNG7P62955 275 aa15.32■□□□□ 0.04
CHRNA3-202ENST00000348639 LBHQ53QV2 105 aaPredicted RBP15.32■□□□□ 0.04
CHRNA3-202ENST00000348639 MS4A6AQ9H2W1 248 aa15.32■□□□□ 0.04
CHRNA3-202ENST00000348639 SONP18583 2426 aaKnown RBP15.32■□□□□ 0.04
CHRNA3-202ENST00000348639 ZNF705AQ6ZN79 300 aaPredicted RBP15.31■□□□□ 0.04
CHRNA3-202ENST00000348639 WFDC3Q8IUB2 231 aa15.31■□□□□ 0.04
CHRNA3-202ENST00000348639 TCF21O43680 179 aa15.31■□□□□ 0.04
CHRNA3-202ENST00000348639 HOXD3P31249 432 aaPredicted RBP15.31■□□□□ 0.04
CHRNA3-202ENST00000348639 SMIM15Q7Z3B0 74 aa15.31■□□□□ 0.04
CHRNA3-202ENST00000348639 TRAV9-2A0A087WT02 112 aa15.3■□□□□ 0.04
CHRNA3-202ENST00000348639 C20orf202A1L168 122 aa15.3■□□□□ 0.04
CHRNA3-202ENST00000348639 RNASE4P34096 147 aaKnown RBP15.3■□□□□ 0.04
CHRNA3-202ENST00000348639 SPANXN1Q5VSR9 72 aa15.3■□□□□ 0.04
CHRNA3-202ENST00000348639 PET117Q6UWS5 81 aa15.3■□□□□ 0.04
CHRNA3-202ENST00000348639 TMEM86BQ8N661 226 aa15.3■□□□□ 0.04
CHRNA3-202ENST00000348639 KLHDC1Q8N7A1 406 aa15.3■□□□□ 0.04
CHRNA3-202ENST00000348639 ITPR2Q14571 2701 aa15.3■□□□□ 0.04
CHRNA3-202ENST00000348639 H3BVH4 76 aa15.29■□□□□ 0.04
CHRNA3-202ENST00000348639 EVI2AP22794 236 aa15.29■□□□□ 0.04
CHRNA3-202ENST00000348639 ZNF747Q9BV97 191 aa15.29■□□□□ 0.04
CHRNA3-202ENST00000348639 A0A096LNJ9 63 aa15.29■□□□□ 0.04
CHRNA3-202ENST00000348639 MAJINQ3KP22 176 aa15.28■□□□□ 0.04
CHRNA3-202ENST00000348639 C2orf88Q9BSF0 95 aa15.28■□□□□ 0.04
CHRNA3-202ENST00000348639 MAP1LC3AQ9H492 121 aa15.28■□□□□ 0.04
CHRNA3-202ENST00000348639 OR4C46A6NHA9 309 aa15.27■□□□□ 0.04
CHRNA3-202ENST00000348639 KLLNB2CW77 178 aa15.27■□□□□ 0.04
CHRNA3-202ENST00000348639 IGLC3P0DOY3 106 aa15.27■□□□□ 0.04
CHRNA3-202ENST00000348639 TFPI2P48307 235 aa15.27■□□□□ 0.04
CHRNA3-202ENST00000348639 KIR3DS1Q14943 382 aa15.27■□□□□ 0.04
CHRNA3-202ENST00000348639 ANXA2RQ3ZCQ2 193 aa15.27■□□□□ 0.04
CHRNA3-202ENST00000348639 TIMM8BQ9Y5J9 83 aaPredicted RBP15.27■□□□□ 0.04
CHRNA3-202ENST00000348639 K7EQG2 157 aa15.27■□□□□ 0.03
CHRNA3-202ENST00000348639 GAS8-AS1O95177 125 aa15.27■□□□□ 0.03
CHRNA3-202ENST00000348639 TNFRSF6BO95407 300 aa15.27■□□□□ 0.03
CHRNA3-202ENST00000348639 ASIPP42127 132 aa15.27■□□□□ 0.03
CHRNA3-202ENST00000348639 SNRPD3P62318 126 aaKnown RBP15.27■□□□□ 0.03
CHRNA3-202ENST00000348639 MYO9AB2RTY4 2548 aa15.26■□□□□ 0.03
CHRNA3-202ENST00000348639 MED14OSP0DP75 135 aa15.26■□□□□ 0.03
CHRNA3-202ENST00000348639 DEFB136Q30KP8 78 aa15.26■□□□□ 0.03
CHRNA3-202ENST00000348639 C18orf65Q6ZTR6 163 aa15.26■□□□□ 0.03
CHRNA3-202ENST00000348639 MRPL52Q86TS9 123 aaKnown RBP15.26■□□□□ 0.03
CHRNA3-202ENST00000348639 SNHG12Q9BXW3 62 aa15.26■□□□□ 0.03
CHRNA3-202ENST00000348639 UQCR10Q9UDW1 63 aa15.26■□□□□ 0.03
CHRNA3-202ENST00000348639 LINC01546A6NGU7 62 aa15.26■□□□□ 0.03
CHRNA3-202ENST00000348639 M0R143 59 aa15.26■□□□□ 0.03
CHRNA3-202ENST00000348639 EREGO14944 169 aa15.26■□□□□ 0.03
CHRNA3-202ENST00000348639 ZNF688P0C7X2 276 aa15.26■□□□□ 0.03
CHRNA3-202ENST00000348639 S100A4P26447 101 aaKnown RBP15.25■□□□□ 0.03
CHRNA3-202ENST00000348639 PSMG4Q5JS54 123 aa15.25■□□□□ 0.03
CHRNA3-202ENST00000348639 KHDC1LQ5JSQ8 128 aa15.25■□□□□ 0.03
CHRNA3-202ENST00000348639 DNAJC9-AS1A6NH13 148 aa15.24■□□□□ 0.03
CHRNA3-202ENST00000348639 HBDP02042 147 aa15.24■□□□□ 0.03
CHRNA3-202ENST00000348639 LINC01545Q5VT33 79 aa15.24■□□□□ 0.03
CHRNA3-202ENST00000348639 ODF3Q96PU9 254 aa15.24■□□□□ 0.03
CHRNA3-202ENST00000348639 NXT2Q9NPJ8 142 aaKnown RBP15.24■□□□□ 0.03
CHRNA3-202ENST00000348639 SCRT2Q9NQ03 307 aa15.24■□□□□ 0.03
CHRNA3-202ENST00000348639 IGLL1P15814 213 aa15.24■□□□□ 0.03
CHRNA3-202ENST00000348639 LURAP1LQ8IV03 231 aa15.24■□□□□ 0.03
CHRNA3-202ENST00000348639 FOXC2Q99958 501 aa15.24■□□□□ 0.03
CHRNA3-202ENST00000348639 YAE1D1Q9NRH1 226 aa15.24■□□□□ 0.03
CHRNA3-202ENST00000348639 CUBNO60494 3623 aa15.24■□□□□ 0.03
CHRNA3-202ENST00000348639 GATA1P15976 413 aaPredicted RBP15.23■□□□□ 0.03
CHRNA3-202ENST00000348639 UNC79Q9P2D8 2635 aa15.23■□□□□ 0.03
CHRNA3-202ENST00000348639 A0A0J9YX75 114 aa15.22■□□□□ 0.03
CHRNA3-202ENST00000348639 SLURP1P55000 103 aa15.22■□□□□ 0.03
CHRNA3-202ENST00000348639 OR2K2Q8NGT1 345 aa15.22■□□□□ 0.03
CHRNA3-202ENST00000348639 H0Y8G0 127 aa15.22■□□□□ 0.03
CHRNA3-202ENST00000348639 GNRH2O43555 120 aa15.22■□□□□ 0.03
CHRNA3-202ENST00000348639 KRTAP1-1Q07627 177 aa15.22■□□□□ 0.03
CHRNA3-202ENST00000348639 TCTEX1D4Q5JR98 221 aa15.22■□□□□ 0.03
CHRNA3-202ENST00000348639 HIST2H2BDQ6DRA6 164 aa15.22■□□□□ 0.03
CHRNA3-202ENST00000348639 C4orf3Q8WVX3 66 aa15.22■□□□□ 0.03
CHRNA3-202ENST00000348639 PHLDA3Q9Y5J5 127 aa15.22■□□□□ 0.03
CHRNA3-202ENST00000348639 PRSS47A8MTI9 375 aa15.21■□□□□ 0.03
CHRNA3-202ENST00000348639 LINC01619G3V211 115 aa15.21■□□□□ 0.03
CHRNA3-202ENST00000348639 RNASE3P12724 160 aaKnown RBP15.21■□□□□ 0.03
CHRNA3-202ENST00000348639 LEPP41159 167 aa15.21■□□□□ 0.03
CHRNA3-202ENST00000348639 ADAMTSL5Q6ZMM2 481 aa15.21■□□□□ 0.03
CHRNA3-202ENST00000348639 Q6ZSV7 163 aa15.21■□□□□ 0.03
CHRNA3-202ENST00000348639 DEFB125Q8N687 156 aa15.21■□□□□ 0.03
CHRNA3-202ENST00000348639 NRACQ8N912 160 aa15.21■□□□□ 0.03
CHRNA3-202ENST00000348639 HECTD1Q9ULT8 2610 aa15.21■□□□□ 0.03
CHRNA3-202ENST00000348639 ACANP16112 2415 aa15.21■□□□□ 0.03
CHRNA3-202ENST00000348639 AKAP9Q99996 3911 aa15.21■□□□□ 0.03
CHRNA3-202ENST00000348639 M0R381 172 aa15.21■□□□□ 0.02
CHRNA3-202ENST00000348639 CD5LO43866 347 aa15.21■□□□□ 0.02
CHRNA3-202ENST00000348639 FXYD7P58549 80 aa15.21■□□□□ 0.02
CHRNA3-202ENST00000348639 WFDC12Q8WWY7 111 aa15.21■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms