RNA–Protein interactions for RNA: ENST00000348513.10

SMARCE1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCE1, Length 5,840 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-202ENST00000348513 F8WDY8 70 aa8.81□□□□□ -1
SMARCE1-202ENST00000348513 LINC00158P58513 81 aa8.81□□□□□ -1
SMARCE1-202ENST00000348513 UFSP1Q6NVU6 142 aa8.81□□□□□ -1
SMARCE1-202ENST00000348513 RNF5Q99942 180 aa8.81□□□□□ -1
SMARCE1-202ENST00000348513 A0A087WWL8 130 aa8.81□□□□□ -1
SMARCE1-202ENST00000348513 LOC107984640A0A0U1RRK4 108 aa8.81□□□□□ -1
SMARCE1-202ENST00000348513 ZNF503-AS2A6NEH8 195 aa8.81□□□□□ -1
SMARCE1-202ENST00000348513 ATP6V0E1O15342 81 aa8.81□□□□□ -1
SMARCE1-202ENST00000348513 LMO1P25800 156 aa8.81□□□□□ -1
SMARCE1-202ENST00000348513 Q6ZRM9 215 aa8.81□□□□□ -1
SMARCE1-202ENST00000348513 TMEM86BQ8N661 226 aa8.81□□□□□ -1
SMARCE1-202ENST00000348513 SLC25A29Q8N8R3 303 aa8.81□□□□□ -1
SMARCE1-202ENST00000348513 BAALCQ8WXS3 180 aa8.81□□□□□ -1
SMARCE1-202ENST00000348513 C15orf62A8K5M9 175 aa8.81□□□□□ -1
SMARCE1-202ENST00000348513 TIMM17BO60830 172 aa8.81□□□□□ -1
SMARCE1-202ENST00000348513 DEFB130BP0DP73 79 aa8.81□□□□□ -1
SMARCE1-202ENST00000348513 DEFB130AP0DP74 79 aa8.81□□□□□ -1
SMARCE1-202ENST00000348513 SMIM26A0A096LP01 95 aa8.81□□□□□ -1
SMARCE1-202ENST00000348513 FOXL2NBQ6ZUU3 175 aa8.81□□□□□ -1
SMARCE1-202ENST00000348513 MUSTN1Q8IVN3 82 aa8.81□□□□□ -1
SMARCE1-202ENST00000348513 C14orf178Q8N769 122 aaPredicted RBP8.81□□□□□ -1
SMARCE1-202ENST00000348513 RASL10AQ92737 203 aa8.81□□□□□ -1
SMARCE1-202ENST00000348513 LINC00477Q96M19 166 aa8.81□□□□□ -1
SMARCE1-202ENST00000348513 LRRK1Q38SD2 2015 aa8.8□□□□□ -1
SMARCE1-202ENST00000348513 ZNF524Q96C55 264 aa8.8□□□□□ -1
SMARCE1-202ENST00000348513 FAM223BA6NKX1 122 aa8.8□□□□□ -1
SMARCE1-202ENST00000348513 OXLD1Q5BKU9 147 aa8.8□□□□□ -1
SMARCE1-202ENST00000348513 FAM223AQ8IWN6 122 aa8.8□□□□□ -1
SMARCE1-202ENST00000348513 USMG5Q96IX5 58 aa8.8□□□□□ -1
SMARCE1-202ENST00000348513 G3V318 75 aa8.8□□□□□ -1
SMARCE1-202ENST00000348513 CFHR3Q02985 330 aa8.8□□□□□ -1
SMARCE1-202ENST00000348513 Q6ZR03 302 aa8.8□□□□□ -1
SMARCE1-202ENST00000348513 SIRPDQ9H106 197 aa8.8□□□□□ -1
SMARCE1-202ENST00000348513 TRBV6-6A0A0A6YYG2 114 aa8.8□□□□□ -1
SMARCE1-202ENST00000348513 VSIG2Q96IQ7 327 aa8.8□□□□□ -1
SMARCE1-202ENST00000348513 SERP1Q9Y6X1 66 aa8.8□□□□□ -1
SMARCE1-202ENST00000348513 DOPEY2Q9Y3R5 2298 aa8.8□□□□□ -1
SMARCE1-202ENST00000348513 PTPRDP23468 1912 aa8.8□□□□□ -1
SMARCE1-202ENST00000348513 TRAV4A0A0B4J268 109 aa8.79□□□□□ -1
SMARCE1-202ENST00000348513 DEFB131AP59861 70 aa8.79□□□□□ -1
SMARCE1-202ENST00000348513 ARTNQ5T4W7 220 aa8.79□□□□□ -1
SMARCE1-202ENST00000348513 C9orf139Q6ZV77 190 aa8.79□□□□□ -1
SMARCE1-202ENST00000348513 PRSS33Q8NF86 280 aa8.79□□□□□ -1
SMARCE1-202ENST00000348513 DOCK7Q96N67 2140 aa8.79□□□□□ -1
SMARCE1-202ENST00000348513 PLA2G2CQ5R387 149 aa8.79□□□□□ -1
SMARCE1-202ENST00000348513 WFDC9Q8NEX5 89 aa8.79□□□□□ -1
SMARCE1-202ENST00000348513 IGKV1-6A0A0C4DH72 117 aa8.79□□□□□ -1
SMARCE1-202ENST00000348513 BUB3O43684 328 aa8.79□□□□□ -1
SMARCE1-202ENST00000348513 SERP2Q8N6R1 65 aa8.79□□□□□ -1
SMARCE1-202ENST00000348513 TM2D2Q9BX73 214 aa8.79□□□□□ -1
SMARCE1-202ENST00000348513 C2orf70A6NJV1 201 aa8.79□□□□□ -1
SMARCE1-202ENST00000348513 LTAP01374 205 aa8.79□□□□□ -1
SMARCE1-202ENST00000348513 ELANEP08246 267 aa8.79□□□□□ -1
SMARCE1-202ENST00000348513 LINC00526Q96FQ7 95 aa8.79□□□□□ -1
SMARCE1-202ENST00000348513 FANCMQ8IYD8 2048 aa8.78□□□□□ -1
SMARCE1-202ENST00000348513 INSP01308 110 aa8.78□□□□□ -1
SMARCE1-202ENST00000348513 PIFOQ8TCI5 191 aa8.78□□□□□ -1
SMARCE1-202ENST00000348513 VCYO14598 125 aa8.78□□□□□ -1
SMARCE1-202ENST00000348513 DAZ1Q9NQZ3 744 aaKnown RBP8.78□□□□□ -1
SMARCE1-202ENST00000348513 PSCAO43653 123 aa8.78□□□□□ -1
SMARCE1-202ENST00000348513 DKK1O94907 266 aa8.78□□□□□ -1
SMARCE1-202ENST00000348513 RPL36AP83881 106 aaKnown RBP8.78□□□□□ -1
SMARCE1-202ENST00000348513 RPL36ALQ969Q0 106 aaKnown RBP8.78□□□□□ -1
SMARCE1-202ENST00000348513 XCL2Q9UBD3 114 aa8.78□□□□□ -1
SMARCE1-202ENST00000348513 IGHV1-69DA0A0B4J2H0 117 aa8.78□□□□□ -1
SMARCE1-202ENST00000348513 IGHV1-69P01742 117 aa8.78□□□□□ -1
SMARCE1-202ENST00000348513 CMC4P56277 68 aaPredicted RBP8.78□□□□□ -1
SMARCE1-202ENST00000348513 WDR86Q86TI4 376 aa8.78□□□□□ -1
SMARCE1-202ENST00000348513 TMEM75Q8N9X5 138 aa8.78□□□□□ -1
SMARCE1-202ENST00000348513 CADP27708 2225 aa8.77□□□□□ -1
SMARCE1-202ENST00000348513 USF3Q68DE3 2245 aa8.77□□□□□ -1
SMARCE1-202ENST00000348513 LYRM9A8MSI8 78 aa8.77□□□□□ -1.01
SMARCE1-202ENST00000348513 UBE2E1P51965 193 aa8.77□□□□□ -1.01
SMARCE1-202ENST00000348513 C1orf159Q96HA4 380 aa8.77□□□□□ -1.01
SMARCE1-202ENST00000348513 J3QQQ9 107 aa8.77□□□□□ -1.01
SMARCE1-202ENST00000348513 AGPAT4-IT1Q9H0P7 198 aa8.77□□□□□ -1.01
SMARCE1-202ENST00000348513 RNF114Q9Y508 228 aa8.77□□□□□ -1.01
SMARCE1-202ENST00000348513 PKDREJQ9NTG1 2253 aa8.77□□□□□ -1.01
SMARCE1-202ENST00000348513 PMAIP1Q13794 54 aa8.77□□□□□ -1.01
SMARCE1-202ENST00000348513 FAM110DQ8TAY7 271 aaPredicted RBP8.77□□□□□ -1.01
SMARCE1-202ENST00000348513 HELZP42694 1942 aaKnown RBP8.77□□□□□ -1.01
SMARCE1-202ENST00000348513 TRAV12-2A0A075B6T6 113 aa8.76□□□□□ -1.01
SMARCE1-202ENST00000348513 PAX4O43316 350 aa8.76□□□□□ -1.01
SMARCE1-202ENST00000348513 C20orf197Q8N268 126 aa8.76□□□□□ -1.01
SMARCE1-202ENST00000348513 MRPS36P82909 103 aaKnown RBP8.76□□□□□ -1.01
SMARCE1-202ENST00000348513 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.76□□□□□ -1.01
SMARCE1-202ENST00000348513 J3QKU1 62 aa8.76□□□□□ -1.01
SMARCE1-202ENST00000348513 MLST8Q9BVC4 326 aa8.76□□□□□ -1.01
SMARCE1-202ENST00000348513 KLK9Q9UKQ9 250 aa8.76□□□□□ -1.01
SMARCE1-202ENST00000348513 IGHV3-16A0A0C4DH30 117 aa8.76□□□□□ -1.01
SMARCE1-202ENST00000348513 K7EM74 188 aa8.76□□□□□ -1.01
SMARCE1-202ENST00000348513 GATA4P43694 442 aa8.76□□□□□ -1.01
SMARCE1-202ENST00000348513 IGFL3Q6UXB1 125 aa8.76□□□□□ -1.01
SMARCE1-202ENST00000348513 C2orf66Q6UXQ4 117 aa8.76□□□□□ -1.01
SMARCE1-202ENST00000348513 ZNF407Q9C0G0 2248 aa8.76□□□□□ -1.01
SMARCE1-202ENST00000348513 NBL1P41271 181 aa8.76□□□□□ -1.01
SMARCE1-202ENST00000348513 C8orf49Q96NF6 230 aa8.76□□□□□ -1.01
SMARCE1-202ENST00000348513 PRB1P04280 392 aa8.75□□□□□ -1.01
SMARCE1-202ENST00000348513 GRNP28799 593 aaKnown RBP8.75□□□□□ -1.01
SMARCE1-202ENST00000348513 SPINK13Q1W4C9 94 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms