RNA–Protein interactions for RNA: ENST00000347557.6

SMTN-202, Transcript of smoothelin, humanhuman

TSL 1 (best) BASIC

Gene SMTN, Length 3,130 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMTN-202ENST00000347557 FXYD2P54710 66 aa11.22□□□□□ -0.61
SMTN-202ENST00000347557 SMIM20Q8N5G0 67 aa11.22□□□□□ -0.61
SMTN-202ENST00000347557 OR4X2Q8NGF9 303 aa11.22□□□□□ -0.61
SMTN-202ENST00000347557 NXT2Q9NPJ8 142 aaKnown RBP11.22□□□□□ -0.61
SMTN-202ENST00000347557 PF4V1P10720 104 aa11.22□□□□□ -0.61
SMTN-202ENST00000347557 ID1P41134 155 aa11.22□□□□□ -0.61
SMTN-202ENST00000347557 PAX8Q06710 450 aa11.22□□□□□ -0.61
SMTN-202ENST00000347557 METTL26Q96S19 204 aa11.22□□□□□ -0.61
SMTN-202ENST00000347557 NHP2Q9NX24 153 aaKnown RBP11.22□□□□□ -0.61
SMTN-202ENST00000347557 SPTBN4Q9H254 2564 aa11.22□□□□□ -0.61
SMTN-202ENST00000347557 Q8N6K4 173 aa11.22□□□□□ -0.61
SMTN-202ENST00000347557 GLMPQ8WWB7 406 aa11.22□□□□□ -0.61
SMTN-202ENST00000347557 CCDC140Q96MF4 163 aa11.22□□□□□ -0.61
SMTN-202ENST00000347557 RAXQ9Y2V3 346 aa11.22□□□□□ -0.61
SMTN-202ENST00000347557 HIVEP3Q5T1R4 2406 aa11.21□□□□□ -0.61
SMTN-202ENST00000347557 FOXI2Q6ZQN5 318 aa11.21□□□□□ -0.61
SMTN-202ENST00000347557 C8orf86Q6ZUL3 223 aa11.21□□□□□ -0.61
SMTN-202ENST00000347557 MYOZ3Q8TDC0 251 aa11.21□□□□□ -0.61
SMTN-202ENST00000347557 MRPL35Q9NZE8 188 aaKnown RBP11.21□□□□□ -0.61
SMTN-202ENST00000347557 A0A1W2PPR1 153 aa11.21□□□□□ -0.62
SMTN-202ENST00000347557 RPL32P62910 135 aaKnown RBP11.21□□□□□ -0.62
SMTN-202ENST00000347557 CITED1Q99966 193 aa11.21□□□□□ -0.62
SMTN-202ENST00000347557 ZFAND3Q9H8U3 227 aa11.21□□□□□ -0.62
SMTN-202ENST00000347557 COL12A1Q99715 3063 aa11.2□□□□□ -0.62
SMTN-202ENST00000347557 SMIM13P0DJ93 91 aa11.2□□□□□ -0.62
SMTN-202ENST00000347557 FAM110DQ8TAY7 271 aaPredicted RBP11.2□□□□□ -0.62
SMTN-202ENST00000347557 S100A4P26447 101 aaKnown RBP11.2□□□□□ -0.62
SMTN-202ENST00000347557 CHAC1Q9BUX1 264 aa11.2□□□□□ -0.62
SMTN-202ENST00000347557 DPM2O94777 84 aa11.2□□□□□ -0.62
SMTN-202ENST00000347557 FABP2P12104 132 aa11.2□□□□□ -0.62
SMTN-202ENST00000347557 SAMD5Q5TGI4 173 aa11.2□□□□□ -0.62
SMTN-202ENST00000347557 MINOS1Q5TGZ0 78 aa11.2□□□□□ -0.62
SMTN-202ENST00000347557 ZNF418Q8TF45 676 aaPredicted RBP11.2□□□□□ -0.62
SMTN-202ENST00000347557 MINOS1-NBL1R4GNA1 71 aa11.2□□□□□ -0.62
SMTN-202ENST00000347557 IGHV3-11P01762 117 aa11.19□□□□□ -0.62
SMTN-202ENST00000347557 LINC01559Q495D7 138 aa11.19□□□□□ -0.62
SMTN-202ENST00000347557 EEF1AKMT3Q96AZ1 226 aa11.19□□□□□ -0.62
SMTN-202ENST00000347557 CLPSL1A2RUU4 121 aa11.19□□□□□ -0.62
SMTN-202ENST00000347557 J3QR89 54 aa11.19□□□□□ -0.62
SMTN-202ENST00000347557 ATP5G2Q06055 141 aa11.19□□□□□ -0.62
SMTN-202ENST00000347557 SLC50A1Q9BRV3 221 aa11.19□□□□□ -0.62
SMTN-202ENST00000347557 BPESC1Q9GZL8 116 aa11.19□□□□□ -0.62
SMTN-202ENST00000347557 A0A1W2PPM0 123 aa11.18□□□□□ -0.62
SMTN-202ENST00000347557 MGPP08493 103 aa11.18□□□□□ -0.62
SMTN-202ENST00000347557 BRD3OSQ6XYD6 125 aa11.18□□□□□ -0.62
SMTN-202ENST00000347557 TMEM190Q8WZ59 177 aa11.18□□□□□ -0.62
SMTN-202ENST00000347557 ERG28Q9UKR5 140 aa11.18□□□□□ -0.62
SMTN-202ENST00000347557 HHLA3Q9XRX5 114 aa11.18□□□□□ -0.62
SMTN-202ENST00000347557 CELSR1Q9NYQ6 3014 aa11.18□□□□□ -0.62
SMTN-202ENST00000347557 TRBV25-1A0A075B6N4 114 aa11.18□□□□□ -0.62
SMTN-202ENST00000347557 TRAV8-2A0A0B4J237 113 aa11.18□□□□□ -0.62
SMTN-202ENST00000347557 B5MCH6 92 aa11.18□□□□□ -0.62
SMTN-202ENST00000347557 GAGE5Q13069 117 aa11.18□□□□□ -0.62
SMTN-202ENST00000347557 GAGE6Q13070 117 aa11.18□□□□□ -0.62
SMTN-202ENST00000347557 C11orf71Q6IPW1 123 aa11.18□□□□□ -0.62
SMTN-202ENST00000347557 SIRPDQ9H106 197 aa11.18□□□□□ -0.62
SMTN-202ENST00000347557 ARL3P36405 182 aa11.18□□□□□ -0.62
SMTN-202ENST00000347557 LY6EQ16553 131 aa11.18□□□□□ -0.62
SMTN-202ENST00000347557 LCNL1Q6ZST4 164 aa11.18□□□□□ -0.62
SMTN-202ENST00000347557 Q8N8P6 123 aa11.18□□□□□ -0.62
SMTN-202ENST00000347557 LAGE3Q14657 143 aa11.17□□□□□ -0.62
SMTN-202ENST00000347557 COX8CQ7Z4L0 72 aa11.17□□□□□ -0.62
SMTN-202ENST00000347557 OOSP1A8MZH6 123 aa11.17□□□□□ -0.62
SMTN-202ENST00000347557 SRD5A1P18405 259 aa11.17□□□□□ -0.62
SMTN-202ENST00000347557 FBXL19-AS1Q494R0 122 aa11.17□□□□□ -0.62
SMTN-202ENST00000347557 SPAG8Q99932 426 aaPredicted RBP11.17□□□□□ -0.62
SMTN-202ENST00000347557 EBI3Q14213 229 aa11.16□□□□□ -0.62
SMTN-202ENST00000347557 PRR9Q5T870 116 aa11.16□□□□□ -0.62
SMTN-202ENST00000347557 C14orf178Q8N769 122 aaPredicted RBP11.16□□□□□ -0.62
SMTN-202ENST00000347557 MAPKAPK5-AS1Q8N8E1 139 aa11.16□□□□□ -0.62
SMTN-202ENST00000347557 F6UB75 175 aa11.16□□□□□ -0.62
SMTN-202ENST00000347557 SPANXB1Q9NS25 103 aaPredicted RBP11.16□□□□□ -0.62
SMTN-202ENST00000347557 TRBV12-3P01733 135 aa11.15□□□□□ -0.62
SMTN-202ENST00000347557 UBE2E1P51965 193 aa11.15□□□□□ -0.62
SMTN-202ENST00000347557 HIST1H4GQ99525 98 aa11.15□□□□□ -0.62
SMTN-202ENST00000347557 YAE1D1Q9NRH1 226 aa11.15□□□□□ -0.62
SMTN-202ENST00000347557 IGHV7-4-1A0A0J9YVY3 117 aa11.15□□□□□ -0.63
SMTN-202ENST00000347557 ATP5LO75964 103 aa11.15□□□□□ -0.63
SMTN-202ENST00000347557 NBL1P41271 181 aa11.15□□□□□ -0.63
SMTN-202ENST00000347557 ATP5J2P56134 94 aa11.15□□□□□ -0.63
SMTN-202ENST00000347557 SPXQ9BT56 116 aa11.15□□□□□ -0.63
SMTN-202ENST00000347557 RNASE4P34096 147 aaKnown RBP11.14□□□□□ -0.63
SMTN-202ENST00000347557 KLRB1Q12918 225 aa11.14□□□□□ -0.63
SMTN-202ENST00000347557 UNQ9165/PRO28630Q6UXU0 137 aa11.14□□□□□ -0.63
SMTN-202ENST00000347557 RPL39LQ96EH5 51 aaKnown RBP11.14□□□□□ -0.63
SMTN-202ENST00000347557 C20orf173Q96LM9 149 aa11.14□□□□□ -0.63
SMTN-202ENST00000347557 CNFNQ9BYD5 112 aa11.14□□□□□ -0.63
SMTN-202ENST00000347557 CREBBPQ92793 2442 aa11.14□□□□□ -0.63
SMTN-202ENST00000347557 CSPG4Q6UVK1 2322 aa11.14□□□□□ -0.63
SMTN-202ENST00000347557 CENPVL3A0A0U1RRI6 287 aa11.14□□□□□ -0.63
SMTN-202ENST00000347557 NPFFO15130 113 aa11.14□□□□□ -0.63
SMTN-202ENST00000347557 AGRNO00468 2067 aa11.14□□□□□ -0.63
SMTN-202ENST00000347557 SRSF1Q07955 248 aaKnown RBP eCLIP11.13□□□□□ -0.63
SMTN-202ENST00000347557 LY6DQ14210 128 aa11.13□□□□□ -0.63
SMTN-202ENST00000347557 SCGB3A1Q96QR1 104 aa11.13□□□□□ -0.63
SMTN-202ENST00000347557 PHLDA3Q9Y5J5 127 aa11.13□□□□□ -0.63
SMTN-202ENST00000347557 SFTA2Q6UW10 78 aa11.13□□□□□ -0.63
SMTN-202ENST00000347557 NRACQ8N912 160 aa11.13□□□□□ -0.63
SMTN-202ENST00000347557 TRAV41A0A0B4J266 112 aa11.13□□□□□ -0.63
SMTN-202ENST00000347557 SPINK8P0C7L1 97 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 97.5 ms