RNA–Protein interactions for RNA: ENST00000346562.6

NPAS3-201, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NPAS3, Length 5,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-201ENST00000346562 PRR20AP86496 221 aa18.1■□□□□ 0.49
NPAS3-201ENST00000346562 WIPF2Q8TF74 440 aaPredicted RBP18.1■□□□□ 0.49
NPAS3-201ENST00000346562 IGHV4-30-2A0A087WSY4 118 aa18.1■□□□□ 0.49
NPAS3-201ENST00000346562 IGHV4-38-2P0DP08 117 aa18.1■□□□□ 0.49
NPAS3-201ENST00000346562 DAZ2Q13117 558 aaKnown RBP18.1■□□□□ 0.49
NPAS3-201ENST00000346562 DAZ4Q86SG3 579 aaKnown RBP18.1■□□□□ 0.49
NPAS3-201ENST00000346562 DAZ3Q9NR90 486 aaKnown RBP18.1■□□□□ 0.49
NPAS3-201ENST00000346562 IFITM1P13164 125 aa18.09■□□□□ 0.49
NPAS3-201ENST00000346562 PRSS47A8MTI9 375 aa18.09■□□□□ 0.49
NPAS3-201ENST00000346562 IGHV3-30P01768 117 aa18.09■□□□□ 0.49
NPAS3-201ENST00000346562 IGHV3-33P01772 117 aa18.09■□□□□ 0.49
NPAS3-201ENST00000346562 IGHV3-30-3P0DP02 117 aa18.09■□□□□ 0.49
NPAS3-201ENST00000346562 IGHV3-30-5P0DP03 117 aa18.09■□□□□ 0.49
NPAS3-201ENST00000346562 Q6ZWC4 215 aa18.09■□□□□ 0.49
NPAS3-201ENST00000346562 TRAV4A0A0B4J268 109 aa18.09■□□□□ 0.49
NPAS3-201ENST00000346562 EGR2P11161 476 aaPredicted RBP18.08■□□□□ 0.49
NPAS3-201ENST00000346562 COX7A2LO14548 114 aa18.08■□□□□ 0.48
NPAS3-201ENST00000346562 A0A1W2PPM0 123 aa18.08■□□□□ 0.48
NPAS3-201ENST00000346562 RSPO3Q9BXY4 272 aaPredicted RBP18.07■□□□□ 0.48
NPAS3-201ENST00000346562 ANKRD29Q8N6D5 301 aa18.07■□□□□ 0.48
NPAS3-201ENST00000346562 KLK5Q9Y337 293 aaPredicted RBP18.07■□□□□ 0.48
NPAS3-201ENST00000346562 NDUFS6O75380 124 aaKnown RBP18.06■□□□□ 0.48
NPAS3-201ENST00000346562 IGLV3-1P01715 115 aa18.06■□□□□ 0.48
NPAS3-201ENST00000346562 FNDC1Q4ZHG4 1894 aaPredicted RBP18.06■□□□□ 0.48
NPAS3-201ENST00000346562 IGF2-ASQ6U949 168 aa18.06■□□□□ 0.48
NPAS3-201ENST00000346562 C5orf38Q86SI9 138 aa18.06■□□□□ 0.48
NPAS3-201ENST00000346562 DKK2Q9UBU2 259 aa18.06■□□□□ 0.48
NPAS3-201ENST00000346562 ARHGEF17Q96PE2 2063 aaPredicted RBP18.05■□□□□ 0.48
NPAS3-201ENST00000346562 LRRK1Q38SD2 2015 aa18.05■□□□□ 0.48
NPAS3-201ENST00000346562 IGLL1P15814 213 aa18.05■□□□□ 0.48
NPAS3-201ENST00000346562 RSPO1Q2MKA7 263 aaPredicted RBP18.05■□□□□ 0.48
NPAS3-201ENST00000346562 C15orf53Q8NAA6 179 aa18.05■□□□□ 0.48
NPAS3-201ENST00000346562 AJUBAQ96IF1 538 aa18.05■□□□□ 0.48
NPAS3-201ENST00000346562 WIPF3A6NGB9 483 aa18.04■□□□□ 0.48
NPAS3-201ENST00000346562 LINC01545Q5VT33 79 aa18.04■□□□□ 0.48
NPAS3-201ENST00000346562 IGHV4-4A0A075B6R2 117 aa18.04■□□□□ 0.48
NPAS3-201ENST00000346562 C10orf105Q8TEF2 133 aa18.04■□□□□ 0.48
NPAS3-201ENST00000346562 TM2D2Q9BX73 214 aa18.04■□□□□ 0.48
NPAS3-201ENST00000346562 NDUFB1O75438 58 aa18.04■□□□□ 0.48
NPAS3-201ENST00000346562 IGFL2Q6UWQ7 119 aa18.04■□□□□ 0.48
NPAS3-201ENST00000346562 H3BQ85 93 aa18.04■□□□□ 0.48
NPAS3-201ENST00000346562 CFC1BP0CG36 223 aa18.04■□□□□ 0.48
NPAS3-201ENST00000346562 CFC1P0CG37 223 aa18.04■□□□□ 0.48
NPAS3-201ENST00000346562 IGHV7-81A0A0B4J1V7 117 aa18.03■□□□□ 0.48
NPAS3-201ENST00000346562 KIAA1671Q9BY89 1806 aa18.03■□□□□ 0.48
NPAS3-201ENST00000346562 CHKB-CPT1BH3BT56 60 aa18.03■□□□□ 0.48
NPAS3-201ENST00000346562 BAALC-AS2P0C853 105 aa18.03■□□□□ 0.48
NPAS3-201ENST00000346562 K7ERJ3 54 aa18.02■□□□□ 0.48
NPAS3-201ENST00000346562 UBE2AP49459 152 aa18.02■□□□□ 0.48
NPAS3-201ENST00000346562 PRB1P04280 392 aa18.02■□□□□ 0.48
NPAS3-201ENST00000346562 MYCNOSP40205 109 aa18.02■□□□□ 0.47
NPAS3-201ENST00000346562 C11orf53Q8IXP5 236 aa18.01■□□□□ 0.47
NPAS3-201ENST00000346562 K7EN84 100 aa18.01■□□□□ 0.47
NPAS3-201ENST00000346562 C12orf74Q32Q52 190 aa18.01■□□□□ 0.47
NPAS3-201ENST00000346562 ASPHD1Q5U4P2 390 aa18.01■□□□□ 0.47
NPAS3-201ENST00000346562 ETDBQ3ZM63 59 aa18.01■□□□□ 0.47
NPAS3-201ENST00000346562 ARTNQ5T4W7 220 aa18.01■□□□□ 0.47
NPAS3-201ENST00000346562 C16orf54Q6UWD8 224 aa18.01■□□□□ 0.47
NPAS3-201ENST00000346562 IGLV10-54A0A075B6I4 117 aa18■□□□□ 0.47
NPAS3-201ENST00000346562 COX7B2Q8TF08 81 aa18■□□□□ 0.47
NPAS3-201ENST00000346562 I3L2K1 104 aa17.99■□□□□ 0.47
NPAS3-201ENST00000346562 TMEM258P61165 79 aa17.99■□□□□ 0.47
NPAS3-201ENST00000346562 C4orf48Q5BLP8 95 aa17.99■□□□□ 0.47
NPAS3-201ENST00000346562 CRYBA4P53673 196 aa17.99■□□□□ 0.47
NPAS3-201ENST00000346562 NDUFA1O15239 70 aa17.99■□□□□ 0.47
NPAS3-201ENST00000346562 TIMM17AQ99595 171 aa17.99■□□□□ 0.47
NPAS3-201ENST00000346562 IGLV11-55A0A075B6I3 123 aa17.99■□□□□ 0.47
NPAS3-201ENST00000346562 IGHV4OR15-8A0A075B7B6 117 aa17.99■□□□□ 0.47
NPAS3-201ENST00000346562 A0A087WW49 117 aa17.99■□□□□ 0.47
NPAS3-201ENST00000346562 K7EP13 123 aa17.99■□□□□ 0.47
NPAS3-201ENST00000346562 C4orf3Q8WVX3 66 aa17.99■□□□□ 0.47
NPAS3-201ENST00000346562 VWA8A3KMH1 1905 aa17.98■□□□□ 0.47
NPAS3-201ENST00000346562 FAM186AA6NE01 2351 aa17.98■□□□□ 0.47
NPAS3-201ENST00000346562 AMTNQ6UX39 209 aa17.98■□□□□ 0.47
NPAS3-201ENST00000346562 ZNF524Q96C55 264 aa17.98■□□□□ 0.47
NPAS3-201ENST00000346562 HIST2H2BCQ6DN03 193 aa17.97■□□□□ 0.47
NPAS3-201ENST00000346562 C5orf56Q8N8D9 126 aa17.97■□□□□ 0.47
NPAS3-201ENST00000346562 MPDZO75970 2070 aa17.97■□□□□ 0.47
NPAS3-201ENST00000346562 H0YGX0 51 aa17.97■□□□□ 0.47
NPAS3-201ENST00000346562 DAZAP2Q15038 168 aaPredicted RBP17.97■□□□□ 0.47
NPAS3-201ENST00000346562 CITED1Q99966 193 aa17.96■□□□□ 0.47
NPAS3-201ENST00000346562 SDK2Q58EX2 2172 aa17.96■□□□□ 0.47
NPAS3-201ENST00000346562 ZDBF2Q9HCK1 2354 aa17.96■□□□□ 0.47
NPAS3-201ENST00000346562 BLCAPP62952 87 aa17.96■□□□□ 0.47
NPAS3-201ENST00000346562 NTN5Q8WTR8 489 aaPredicted RBP17.96■□□□□ 0.47
NPAS3-201ENST00000346562 H3BMG7 143 aa17.96■□□□□ 0.47
NPAS3-201ENST00000346562 IL15RAQ13261 267 aa17.96■□□□□ 0.47
NPAS3-201ENST00000346562 TMEM89A2RUT3 159 aa17.96■□□□□ 0.46
NPAS3-201ENST00000346562 ZNF747Q9BV97 191 aa17.96■□□□□ 0.46
NPAS3-201ENST00000346562 SPANXCQ9NY87 97 aa17.96■□□□□ 0.46
NPAS3-201ENST00000346562 HHLA3Q9XRX5 114 aa17.96■□□□□ 0.46
NPAS3-201ENST00000346562 ACYP1P07311 99 aa17.95■□□□□ 0.46
NPAS3-201ENST00000346562 IGFBPL1Q8WX77 278 aa17.95■□□□□ 0.46
NPAS3-201ENST00000346562 C10orf91Q5T1B1 145 aa17.95■□□□□ 0.46
NPAS3-201ENST00000346562 ZFP2Q6ZN57 461 aa17.95■□□□□ 0.46
NPAS3-201ENST00000346562 RPL39LQ96EH5 51 aaKnown RBP17.95■□□□□ 0.46
NPAS3-201ENST00000346562 SND1-IT1Q9HBX3 110 aa17.95■□□□□ 0.46
NPAS3-201ENST00000346562 C9orf47Q6ZRZ4 202 aa17.95■□□□□ 0.46
NPAS3-201ENST00000346562 IL17DQ8TAD2 202 aa17.95■□□□□ 0.46
NPAS3-201ENST00000346562 INTS1Q8N201 2190 aaKnown RBP17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms