RNA–Protein interactions for RNA: ENST00000346436.10

CLCN6-202, Transcript of chloride voltage-gated channel 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN6, Length 5,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-202ENST00000346436 HBDP02042 147 aa8.58□□□□□ -1.04
CLCN6-202ENST00000346436 Q86TA4 180 aa8.58□□□□□ -1.04
CLCN6-202ENST00000346436 C8orf49Q96NF6 230 aa8.58□□□□□ -1.04
CLCN6-202ENST00000346436 CHD7Q9P2D1 2997 aa8.58□□□□□ -1.04
CLCN6-202ENST00000346436 SMPXQ9UHP9 88 aa8.58□□□□□ -1.04
CLCN6-202ENST00000346436 ANGP03950 147 aaKnown RBP8.57□□□□□ -1.04
CLCN6-202ENST00000346436 C14orf177Q52M58 125 aa8.57□□□□□ -1.04
CLCN6-202ENST00000346436 CHTOPQ9Y3Y2 248 aaKnown RBP8.57□□□□□ -1.04
CLCN6-202ENST00000346436 TECTAO75443 2155 aa8.57□□□□□ -1.04
CLCN6-202ENST00000346436 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.57□□□□□ -1.049e-10■■■■□ 21.5
CLCN6-202ENST00000346436 ARFGEF3Q5TH69 2177 aa8.57□□□□□ -1.04
CLCN6-202ENST00000346436 TMEM213A2RRL7 107 aa8.57□□□□□ -1.04
CLCN6-202ENST00000346436 LAGE3Q14657 143 aa8.57□□□□□ -1.04
CLCN6-202ENST00000346436 MSMPQ1L6U9 139 aa8.57□□□□□ -1.04
CLCN6-202ENST00000346436 C20orf144Q9BQM9 153 aa8.57□□□□□ -1.04
CLCN6-202ENST00000346436 PYGO2Q9BRQ0 406 aa8.57□□□□□ -1.04
CLCN6-202ENST00000346436 WFDC11Q8NEX6 87 aa8.57□□□□□ -1.04
CLCN6-202ENST00000346436 SH2D1AO60880 128 aa8.56□□□□□ -1.04
CLCN6-202ENST00000346436 BRWD1-AS2P59051 145 aa8.56□□□□□ -1.04
CLCN6-202ENST00000346436 C4orf3Q8WVX3 66 aa8.56□□□□□ -1.04
CLCN6-202ENST00000346436 GUSBP1Q15486 140 aa8.56□□□□□ -1.04
CLCN6-202ENST00000346436 LY6G5BQ8NDX9 201 aa8.56□□□□□ -1.04
CLCN6-202ENST00000346436 RITA1Q96K30 269 aa8.56□□□□□ -1.04
CLCN6-202ENST00000346436 MS4A6AQ9H2W1 248 aa8.56□□□□□ -1.04
CLCN6-202ENST00000346436 LY6G6DO95868 133 aa8.56□□□□□ -1.04
CLCN6-202ENST00000346436 Q9HAA7 133 aa8.56□□□□□ -1.04
CLCN6-202ENST00000346436 PIEZO1Q92508 2521 aa8.56□□□□□ -1.04
CLCN6-202ENST00000346436 SMIM27A0A1W2PRY6 76 aa8.56□□□□□ -1.04
CLCN6-202ENST00000346436 TMEM238C9JI98 176 aa8.56□□□□□ -1.04
CLCN6-202ENST00000346436 OVOL2Q9BRP0 275 aa8.56□□□□□ -1.04
CLCN6-202ENST00000346436 SPCS1Q9Y6A9 102 aa8.56□□□□□ -1.04
CLCN6-202ENST00000346436 MYMXA0A1B0GTQ4 84 aa8.56□□□□□ -1.04
CLCN6-202ENST00000346436 IFI27L1Q96BM0 104 aa8.56□□□□□ -1.04
CLCN6-202ENST00000346436 KLF5Q13887 457 aaPredicted RBP8.55□□□□□ -1.04
CLCN6-202ENST00000346436 STPG4Q8N801 248 aa8.55□□□□□ -1.04
CLCN6-202ENST00000346436 C11orf52Q96A22 123 aa8.55□□□□□ -1.04
CLCN6-202ENST00000346436 FXYD5Q96DB9 178 aa8.55□□□□□ -1.04
CLCN6-202ENST00000346436 C17orf77Q96MU5 243 aa8.55□□□□□ -1.04
CLCN6-202ENST00000346436 CUL9Q8IWT3 2517 aa8.55□□□□□ -1.04
CLCN6-202ENST00000346436 IGLC2P0DOY2 106 aa8.55□□□□□ -1.04
CLCN6-202ENST00000346436 IGLC3P0DOY3 106 aa8.55□□□□□ -1.04
CLCN6-202ENST00000346436 Q8NA96 180 aa8.55□□□□□ -1.04
CLCN6-202ENST00000346436 NHP2Q9NX24 153 aaKnown RBP8.55□□□□□ -1.04
CLCN6-202ENST00000346436 LRP4O75096 1905 aa8.55□□□□□ -1.04
CLCN6-202ENST00000346436 DPM2O94777 84 aa8.55□□□□□ -1.04
CLCN6-202ENST00000346436 IGLL1P15814 213 aa8.54□□□□□ -1.04
CLCN6-202ENST00000346436 C14orf178Q8N769 122 aaPredicted RBP8.54□□□□□ -1.04
CLCN6-202ENST00000346436 KLK9Q9UKQ9 250 aa8.54□□□□□ -1.04
CLCN6-202ENST00000346436 OTOGLQ3ZCN5 2332 aa8.54□□□□□ -1.04
CLCN6-202ENST00000346436 SLURP1P55000 103 aa8.54□□□□□ -1.04
CLCN6-202ENST00000346436 DEFB136Q30KP8 78 aa8.54□□□□□ -1.04
CLCN6-202ENST00000346436 A0A0J9YY99 117 aa8.54□□□□□ -1.04
CLCN6-202ENST00000346436 IGLL5B9A064 214 aa8.54□□□□□ -1.04
CLCN6-202ENST00000346436 ZNRF2Q8NHG8 242 aa8.54□□□□□ -1.04
CLCN6-202ENST00000346436 IGHV1-24A0A0C4DH33 117 aa8.54□□□□□ -1.04
CLCN6-202ENST00000346436 PROP1O75360 226 aa8.54□□□□□ -1.04
CLCN6-202ENST00000346436 E7EUB6 86 aa8.54□□□□□ -1.04
CLCN6-202ENST00000346436 CTSZQ9UBR2 303 aa8.54□□□□□ -1.04
CLCN6-202ENST00000346436 LEPROTO15243 131 aa8.53□□□□□ -1.04
CLCN6-202ENST00000346436 A0A087WWL8 130 aa8.53□□□□□ -1.04
CLCN6-202ENST00000346436 M0R2P5 195 aa8.53□□□□□ -1.04
CLCN6-202ENST00000346436 IGHV4-31P0DP07 118 aa8.53□□□□□ -1.04
CLCN6-202ENST00000346436 PRIMA1Q86XR5 153 aa8.53□□□□□ -1.04
CLCN6-202ENST00000346436 ZNF48Q96MX3 618 aaPredicted RBP8.53□□□□□ -1.04
CLCN6-202ENST00000346436 CITED2Q99967 270 aaPredicted RBP8.53□□□□□ -1.04
CLCN6-202ENST00000346436 SPRY4Q9C004 299 aa8.53□□□□□ -1.04
CLCN6-202ENST00000346436 TNCP24821 2201 aa8.53□□□□□ -1.04
CLCN6-202ENST00000346436 UNC80Q8N2C7 3258 aa8.53□□□□□ -1.04
CLCN6-202ENST00000346436 C11orf45Q8TAV5 145 aa8.53□□□□□ -1.04
CLCN6-202ENST00000346436 KLF12Q9Y4X4 402 aa8.53□□□□□ -1.04
CLCN6-202ENST00000346436 CEP192Q8TEP8 1941 aa8.53□□□□□ -1.04
CLCN6-202ENST00000346436 RANBP2P49792 3224 aaKnown RBP8.53□□□□□ -1.04
CLCN6-202ENST00000346436 GAGE6Q13070 117 aa8.53□□□□□ -1.04
CLCN6-202ENST00000346436 COA6Q5JTJ3 125 aaKnown RBP8.53□□□□□ -1.04
CLCN6-202ENST00000346436 LAMTOR3Q9UHA4 124 aa8.53□□□□□ -1.04
CLCN6-202ENST00000346436 H3BMM0 161 aa8.52□□□□□ -1.04
CLCN6-202ENST00000346436 C1orf229Q6ZS94 237 aaPredicted RBP8.52□□□□□ -1.04
CLCN6-202ENST00000346436 ORAOV1Q8WV07 137 aa8.52□□□□□ -1.04
CLCN6-202ENST00000346436 UBE2WQ96B02 151 aa8.52□□□□□ -1.04
CLCN6-202ENST00000346436 NOP10Q9NPE3 64 aaKnown RBP8.52□□□□□ -1.04
CLCN6-202ENST00000346436 SIGLEC8Q9NYZ4 499 aa8.52□□□□□ -1.04
CLCN6-202ENST00000346436 PAX2Q02962 417 aa8.52□□□□□ -1.05
CLCN6-202ENST00000346436 C10orf126Q8N4M7 172 aa8.52□□□□□ -1.05
CLCN6-202ENST00000346436 A0A0U1RRA0 63 aa8.52□□□□□ -1.05
CLCN6-202ENST00000346436 TNFRSF13BO14836 293 aaPredicted RBP8.52□□□□□ -1.05
CLCN6-202ENST00000346436 MEGF9Q9H1U4 602 aa8.52□□□□□ -1.05
CLCN6-202ENST00000346436 IGHV3-16A0A0C4DH30 117 aa8.52□□□□□ -1.05
CLCN6-202ENST00000346436 C10orf142B7Z368 130 aa8.51□□□□□ -1.05
CLCN6-202ENST00000346436 I3L3M4 83 aa8.51□□□□□ -1.05
CLCN6-202ENST00000346436 SPRY2O43597 315 aa8.51□□□□□ -1.05
CLCN6-202ENST00000346436 GATD1Q8NB37 220 aa8.51□□□□□ -1.05
CLCN6-202ENST00000346436 ZNF503Q96F45 646 aa8.51□□□□□ -1.05
CLCN6-202ENST00000346436 YPEL4Q96NS1 127 aa8.51□□□□□ -1.05
CLCN6-202ENST00000346436 SEM1Q6ZVN7 128 aa8.51□□□□□ -1.05
CLCN6-202ENST00000346436 ZC2HC1AQ96GY0 325 aa8.51□□□□□ -1.05
CLCN6-202ENST00000346436 TRAV2A0A0B4J234 112 aa8.51□□□□□ -1.05
CLCN6-202ENST00000346436 IGLV2-23P01705 113 aa8.51□□□□□ -1.05
CLCN6-202ENST00000346436 UBE2V1Q13404 147 aa8.51□□□□□ -1.05
CLCN6-202ENST00000346436 TMEM95Q3KNT9 176 aa8.51□□□□□ -1.05
CLCN6-202ENST00000346436 PATE2Q6UY27 113 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms