RNA–Protein interactions for RNA: ENST00000345851.7

TRIM3-201, Transcript of tripartite motif containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM3, Length 2,879 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-201ENST00000345851 IGHG4P01861 327 aa16.52■□□□□ 0.24
TRIM3-201ENST00000345851 COX8CQ7Z4L0 72 aa16.52■□□□□ 0.24
TRIM3-201ENST00000345851 DYNAPQ8N1N2 210 aa16.52■□□□□ 0.24
TRIM3-201ENST00000345851 TNFRSF13BO14836 293 aaPredicted RBP16.52■□□□□ 0.24
TRIM3-201ENST00000345851 XGP55808 180 aa16.52■□□□□ 0.24
TRIM3-201ENST00000345851 CFAP126Q5VTH2 177 aa16.52■□□□□ 0.24
TRIM3-201ENST00000345851 CFHR4Q92496 578 aa16.52■□□□□ 0.24
TRIM3-201ENST00000345851 CNFNQ9BYD5 112 aa16.52■□□□□ 0.24
TRIM3-201ENST00000345851 LINC01549A6NIU2 74 aa16.52■□□□□ 0.23
TRIM3-201ENST00000345851 PRAC2D3DTV9 90 aa16.52■□□□□ 0.23
TRIM3-201ENST00000345851 GATA3P23771 443 aa16.52■□□□□ 0.23
TRIM3-201ENST00000345851 MYMXA0A1B0GTQ4 84 aa16.51■□□□□ 0.23
TRIM3-201ENST00000345851 LINC01548A6NM66 108 aa16.51■□□□□ 0.23
TRIM3-201ENST00000345851 RPL7P18124 248 aaKnown RBP16.51■□□□□ 0.23
TRIM3-201ENST00000345851 MAP1AP78559 2803 aaPredicted RBP16.51■□□□□ 0.23
TRIM3-201ENST00000345851 LINC01559Q495D7 138 aa16.51■□□□□ 0.23
TRIM3-201ENST00000345851 ZFP2Q6ZN57 461 aa16.51■□□□□ 0.23
TRIM3-201ENST00000345851 PLNP26678 52 aa16.5■□□□□ 0.23
TRIM3-201ENST00000345851 KLRD1Q13241 179 aa16.5■□□□□ 0.23
TRIM3-201ENST00000345851 IL17RELQ6ZVW7 336 aa16.5■□□□□ 0.23
TRIM3-201ENST00000345851 DLX4Q92988 240 aaPredicted RBP16.5■□□□□ 0.23
TRIM3-201ENST00000345851 ZNF48Q96MX3 618 aaPredicted RBP16.5■□□□□ 0.23
TRIM3-201ENST00000345851 SMAD5-AS1Q9Y6J3 95 aa16.5■□□□□ 0.23
TRIM3-201ENST00000345851 TIMM23O14925 209 aa16.5■□□□□ 0.23
TRIM3-201ENST00000345851 Q6ZUT4 128 aa16.49■□□□□ 0.23
TRIM3-201ENST00000345851 RNF182Q8N6D2 247 aa16.49■□□□□ 0.23
TRIM3-201ENST00000345851 RAB1BQ9H0U4 201 aa16.49■□□□□ 0.23
TRIM3-201ENST00000345851 TGFAP01135 160 aa16.48■□□□□ 0.23
TRIM3-201ENST00000345851 MFAP4P55083 255 aa16.48■□□□□ 0.23
TRIM3-201ENST00000345851 NRACQ8N912 160 aa16.48■□□□□ 0.23
TRIM3-201ENST00000345851 RNF183Q96D59 192 aa16.48■□□□□ 0.23
TRIM3-201ENST00000345851 PSMG3-AS1Q96PY0 264 aa16.48■□□□□ 0.23
TRIM3-201ENST00000345851 LGALS1P09382 135 aaKnown RBP16.48■□□□□ 0.23
TRIM3-201ENST00000345851 C11orf21Q9P2W6 132 aa16.48■□□□□ 0.23
TRIM3-201ENST00000345851 IGKV3D-20A0A0C4DH25 116 aa16.48■□□□□ 0.23
TRIM3-201ENST00000345851 F8VRH5 84 aa16.48■□□□□ 0.23
TRIM3-201ENST00000345851 F8W735 103 aaPredicted RBP16.47■□□□□ 0.23
TRIM3-201ENST00000345851 H7C1H1 209 aa16.47■□□□□ 0.23
TRIM3-201ENST00000345851 TMEM78Q5T7P6 136 aa16.47■□□□□ 0.23
TRIM3-201ENST00000345851 FANCD2OSQ96PS1 177 aa16.47■□□□□ 0.23
TRIM3-201ENST00000345851 SCGB1D4Q6XE38 83 aa16.46■□□□□ 0.23
TRIM3-201ENST00000345851 Q6ZQT7 251 aa16.46■□□□□ 0.23
TRIM3-201ENST00000345851 SRSF9Q13242 221 aaKnown RBP eCLIP16.45■□□□□ 0.22
TRIM3-201ENST00000345851 IGSF10Q6WRI0 2623 aa16.45■□□□□ 0.22
TRIM3-201ENST00000345851 HES1Q14469 280 aa16.45■□□□□ 0.22
TRIM3-201ENST00000345851 C21orf62Q9NYP8 219 aa16.45■□□□□ 0.22
TRIM3-201ENST00000345851 ZFHX3Q15911 3703 aa16.45■□□□□ 0.22
TRIM3-201ENST00000345851 B9A039 149 aa16.44■□□□□ 0.22
TRIM3-201ENST00000345851 PLEKHB2Q96CS7 222 aa16.44■□□□□ 0.22
TRIM3-201ENST00000345851 CARD19Q96LW7 228 aa16.44■□□□□ 0.22
TRIM3-201ENST00000345851 ONECUT1Q9UBC0 465 aa16.44■□□□□ 0.22
TRIM3-201ENST00000345851 IGHV3-66A0A0C4DH42 116 aa16.44■□□□□ 0.22
TRIM3-201ENST00000345851 ZNF815PA8K554 130 aa16.44■□□□□ 0.22
TRIM3-201ENST00000345851 TSPAN13O95857 204 aa16.44■□□□□ 0.22
TRIM3-201ENST00000345851 SCGB3A1Q96QR1 104 aa16.44■□□□□ 0.22
TRIM3-201ENST00000345851 PRADC1Q9BSG0 188 aa16.44■□□□□ 0.22
TRIM3-201ENST00000345851 ATP6V0E2Q8NHE4 81 aa16.44■□□□□ 0.22
TRIM3-201ENST00000345851 KAAG1Q9UBP8 84 aa16.44■□□□□ 0.22
TRIM3-201ENST00000345851 FLNCQ14315 2725 aa16.43■□□□□ 0.22
TRIM3-201ENST00000345851 IGHV3OR16-13A0A075B7E8 117 aa16.43■□□□□ 0.22
TRIM3-201ENST00000345851 IGHV3-74A0A0B4J1X5 117 aa16.43■□□□□ 0.22
TRIM3-201ENST00000345851 NBR2O15453 112 aa16.43■□□□□ 0.22
TRIM3-201ENST00000345851 SPRY2O43597 315 aa16.43■□□□□ 0.22
TRIM3-201ENST00000345851 CRYBG3Q68DQ2 2970 aa16.43■□□□□ 0.22
TRIM3-201ENST00000345851 PRORYQ9H606 182 aa16.43■□□□□ 0.22
TRIM3-201ENST00000345851 SS18L2Q9UHA2 77 aa16.43■□□□□ 0.22
TRIM3-201ENST00000345851 SPG11Q96JI7 2443 aa16.43■□□□□ 0.22
TRIM3-201ENST00000345851 H3BVH4 76 aa16.43■□□□□ 0.22
TRIM3-201ENST00000345851 SPANXN1Q5VSR9 72 aa16.43■□□□□ 0.22
TRIM3-201ENST00000345851 PRSS29PA6NIE9 313 aa16.42■□□□□ 0.22
TRIM3-201ENST00000345851 ZNF672Q499Z4 452 aaPredicted RBP16.42■□□□□ 0.22
TRIM3-201ENST00000345851 SRSF8Q9BRL6 282 aaKnown RBP16.42■□□□□ 0.22
TRIM3-201ENST00000345851 IGLV11-55A0A075B6I3 123 aa16.42■□□□□ 0.22
TRIM3-201ENST00000345851 SRSF2Q01130 221 aaKnown RBP16.42■□□□□ 0.22
TRIM3-201ENST00000345851 FBXL19-AS1Q494R0 122 aa16.41■□□□□ 0.22
TRIM3-201ENST00000345851 KLHL30-AS1Q8NEE0 82 aa16.41■□□□□ 0.22
TRIM3-201ENST00000345851 KIR2DL4Q99706 377 aa16.41■□□□□ 0.22
TRIM3-201ENST00000345851 SLC25A16P16260 332 aa16.4■□□□□ 0.22
TRIM3-201ENST00000345851 UTP20O75691 2785 aaKnown RBP16.4■□□□□ 0.22
TRIM3-201ENST00000345851 A0A1W2PPR1 153 aa16.4■□□□□ 0.22
TRIM3-201ENST00000345851 CSMD2Q7Z408 3487 aa16.4■□□□□ 0.22
TRIM3-201ENST00000345851 A6NJY4 79 aa16.4■□□□□ 0.22
TRIM3-201ENST00000345851 GNLYP22749 145 aa16.4■□□□□ 0.22
TRIM3-201ENST00000345851 NDPQ00604 133 aa16.4■□□□□ 0.22
TRIM3-201ENST00000345851 PPDPFLQ8WWR9 84 aa16.4■□□□□ 0.22
TRIM3-201ENST00000345851 ANAPC13Q9BS18 74 aa16.4■□□□□ 0.22
TRIM3-201ENST00000345851 SMIM2Q9BVW6 85 aa16.4■□□□□ 0.22
TRIM3-201ENST00000345851 CELSR1Q9NYQ6 3014 aa16.39■□□□□ 0.21
TRIM3-201ENST00000345851 ERG28Q9UKR5 140 aa16.39■□□□□ 0.21
TRIM3-201ENST00000345851 IGHV7-4-1A0A0J9YVY3 117 aa16.39■□□□□ 0.21
TRIM3-201ENST00000345851 LINC01619G3V211 115 aa16.39■□□□□ 0.21
TRIM3-201ENST00000345851 TRAV12-1A0A0B4J245 112 aa16.38■□□□□ 0.21
TRIM3-201ENST00000345851 CTSGP08311 255 aa16.38■□□□□ 0.21
TRIM3-201ENST00000345851 TEN1Q86WV5 123 aa16.38■□□□□ 0.21
TRIM3-201ENST00000345851 AGPAT4-IT1Q9H0P7 198 aa16.38■□□□□ 0.21
TRIM3-201ENST00000345851 TCL1BO95988 128 aa16.38■□□□□ 0.21
TRIM3-201ENST00000345851 J3KRW8 73 aa16.37■□□□□ 0.21
TRIM3-201ENST00000345851 UBE2D1P51668 147 aa16.37■□□□□ 0.21
TRIM3-201ENST00000345851 DEFB104AQ8WTQ1 72 aa16.37■□□□□ 0.21
TRIM3-201ENST00000345851 IGHV3-49A0A0A0MS15 119 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms