RNA–Protein interactions for RNA: ENST00000345519.9

CLTA-202, Transcript of clathrin light chain A, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLTA, Length 1,073 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTA-202ENST00000345519 TMEM183BQ1AE95 376 aa13.78□□□□□ -0.2
CLTA-202ENST00000345519 TMUB2Q71RG4 321 aa13.78□□□□□ -0.2
CLTA-202ENST00000345519 UBE2DNLQ8IWF7 75 aa13.78□□□□□ -0.2
CLTA-202ENST00000345519 TMEM183AQ8IXX5 376 aa13.78□□□□□ -0.2
CLTA-202ENST00000345519 KCNS1Q96KK3 526 aa13.78□□□□□ -0.2
CLTA-202ENST00000345519 SGK494Q96LW2 274 aa13.78□□□□□ -0.2
CLTA-202ENST00000345519 ZNF471Q9BX82 626 aaPredicted RBP13.78□□□□□ -0.2
CLTA-202ENST00000345519 MRPL16Q9NX20 251 aaKnown RBP13.78□□□□□ -0.2
CLTA-202ENST00000345519 PEX7O00628 323 aa13.77□□□□□ -0.21
CLTA-202ENST00000345519 EIF5AP63241 154 aaKnown RBP13.77□□□□□ -0.21
CLTA-202ENST00000345519 OR5I1Q13606 314 aa13.77□□□□□ -0.21
CLTA-202ENST00000345519 SAPCD1Q5SSQ6 148 aa13.77□□□□□ -0.21
CLTA-202ENST00000345519 IQCF2Q8IXL9 164 aa13.77□□□□□ -0.21
CLTA-202ENST00000345519 ZNRF2Q8NHG8 242 aa13.77□□□□□ -0.21
CLTA-202ENST00000345519 C11orf21Q9P2W6 132 aa13.77□□□□□ -0.21
CLTA-202ENST00000345519 NUDT3O95989 172 aa13.76□□□□□ -0.21
CLTA-202ENST00000345519 GCGP01275 180 aa13.76□□□□□ -0.21
CLTA-202ENST00000345519 UBE2G2P60604 165 aa13.76□□□□□ -0.21
CLTA-202ENST00000345519 SMUG1Q53HV7 270 aa13.76□□□□□ -0.21
CLTA-202ENST00000345519 Q86TA4 180 aa13.76□□□□□ -0.21
CLTA-202ENST00000345519 LINC00479Q96M42 142 aa13.76□□□□□ -0.21
CLTA-202ENST00000345519 UPK3BQ9BT76 320 aa13.76□□□□□ -0.21
CLTA-202ENST00000345519 LINC00588Q9Y4M8 146 aa13.76□□□□□ -0.21
CLTA-202ENST00000345519 TRBV6-1A0A0K0K1D8 114 aa13.75□□□□□ -0.21
CLTA-202ENST00000345519 C1QBP02746 253 aa13.75□□□□□ -0.21
CLTA-202ENST00000345519 TPT1P13693 172 aaKnown RBP13.75□□□□□ -0.21
CLTA-202ENST00000345519 LGALSLQ3ZCW2 172 aaPredicted RBP13.75□□□□□ -0.21
CLTA-202ENST00000345519 ZFP69Q49AA0 526 aa13.75□□□□□ -0.21
CLTA-202ENST00000345519 SDF2L1Q9HCN8 221 aa13.75□□□□□ -0.21
CLTA-202ENST00000345519 DNAH11Q96DT5 4516 aa13.74□□□□□ -0.21
CLTA-202ENST00000345519 A0A096LPF7 62 aa13.74□□□□□ -0.21
CLTA-202ENST00000345519 GNRH2O43555 120 aa13.74□□□□□ -0.21
CLTA-202ENST00000345519 CCL18P55774 89 aa13.74□□□□□ -0.21
CLTA-202ENST00000345519 FHL2Q14192 279 aa13.74□□□□□ -0.21
CLTA-202ENST00000345519 LINC00336Q6ZUF6 198 aa13.74□□□□□ -0.21
CLTA-202ENST00000345519 PRNTQ86SH4 94 aa13.74□□□□□ -0.21
CLTA-202ENST00000345519 NAGKQ9UJ70 344 aa13.74□□□□□ -0.21
CLTA-202ENST00000345519 A0A0J9YY99 117 aa13.73□□□□□ -0.21
CLTA-202ENST00000345519 M0R2P5 195 aa13.73□□□□□ -0.21
CLTA-202ENST00000345519 PPT1P50897 306 aa13.73□□□□□ -0.21
CLTA-202ENST00000345519 SLAQ13239 276 aa13.73□□□□□ -0.21
CLTA-202ENST00000345519 C9orf85Q96MD7 179 aa13.73□□□□□ -0.21
CLTA-202ENST00000345519 PRO0255Q9UI72 69 aa13.73□□□□□ -0.21
CLTA-202ENST00000345519 DYNC1H1Q14204 4646 aaKnown RBP13.72□□□□□ -0.21
CLTA-202ENST00000345519 TRAV34A0A0B4J273 112 aa13.72□□□□□ -0.21
CLTA-202ENST00000345519 RTL8CO15255 209 aa13.72□□□□□ -0.21
CLTA-202ENST00000345519 PFDN1O60925 122 aa13.72□□□□□ -0.21
CLTA-202ENST00000345519 IFNA7P01567 189 aa13.72□□□□□ -0.21
CLTA-202ENST00000345519 CRYBA4P53673 196 aa13.72□□□□□ -0.21
CLTA-202ENST00000345519 FAM213BQ8TBF2 198 aa13.72□□□□□ -0.21
CLTA-202ENST00000345519 PTH2Q96A98 100 aa13.72□□□□□ -0.21
CLTA-202ENST00000345519 FMC1Q96HJ9 113 aa13.72□□□□□ -0.21
CLTA-202ENST00000345519 TRAV4A0A0B4J268 109 aa13.71□□□□□ -0.21
CLTA-202ENST00000345519 SFT2D1Q8WV19 159 aa13.71□□□□□ -0.21
CLTA-202ENST00000345519 ZFP30Q9Y2G7 519 aa13.71□□□□□ -0.21
CLTA-202ENST00000345519 IGLV2-18A0A075B6J9 118 aa13.7□□□□□ -0.22
CLTA-202ENST00000345519 TRAV1-1A0A0B4J248 108 aa13.7□□□□□ -0.22
CLTA-202ENST00000345519 LTAP01374 205 aa13.7□□□□□ -0.22
CLTA-202ENST00000345519 RNASE3P12724 160 aaKnown RBP13.7□□□□□ -0.22
CLTA-202ENST00000345519 RAB5CP51148 216 aa13.7□□□□□ -0.22
CLTA-202ENST00000345519 ESRGQ1W209 222 aa13.7□□□□□ -0.22
CLTA-202ENST00000345519 ZNF479Q96JC4 524 aa13.7□□□□□ -0.22
CLTA-202ENST00000345519 MRPS16Q9Y3D3 137 aaKnown RBP13.7□□□□□ -0.22
CLTA-202ENST00000345519 IGKV3D-20A0A0C4DH25 116 aa13.69□□□□□ -0.22
CLTA-202ENST00000345519 PAGE4O60829 102 aa13.69□□□□□ -0.22
CLTA-202ENST00000345519 H2AFB1P0C5Y9 115 aa13.69□□□□□ -0.22
CLTA-202ENST00000345519 PIK3CD-AS1Q5SR53 167 aa13.69□□□□□ -0.22
CLTA-202ENST00000345519 DNLZQ5SXM8 178 aa13.69□□□□□ -0.22
CLTA-202ENST00000345519 HHLA3Q9XRX5 114 aa13.69□□□□□ -0.22
CLTA-202ENST00000345519 NBDYA0A0U1RRE5 68 aa13.68□□□□□ -0.22
CLTA-202ENST00000345519 A0A1B0GVY2 172 aa13.68□□□□□ -0.22
CLTA-202ENST00000345519 M0R2N4 97 aa13.68□□□□□ -0.22
CLTA-202ENST00000345519 PAX4O43316 350 aa13.68□□□□□ -0.22
CLTA-202ENST00000345519 CRIP1P50238 77 aa13.68□□□□□ -0.22
CLTA-202ENST00000345519 ZC2HC1AQ96GY0 325 aa13.68□□□□□ -0.22
CLTA-202ENST00000345519 FABP5P3A8MUU1 101 aa13.67□□□□□ -0.22
CLTA-202ENST00000345519 IGHV3-53P01767 116 aa13.67□□□□□ -0.22
CLTA-202ENST00000345519 SFTA3P0C7M3 94 aa13.67□□□□□ -0.22
CLTA-202ENST00000345519 SULT1A2P50226 295 aa13.67□□□□□ -0.22
CLTA-202ENST00000345519 ZNF674Q2M3X9 581 aa13.67□□□□□ -0.22
CLTA-202ENST00000345519 EIF5AL1Q6IS14 154 aaKnown RBP13.67□□□□□ -0.22
CLTA-202ENST00000345519 ZNF575Q86XF7 245 aa13.67□□□□□ -0.22
CLTA-202ENST00000345519 ICOSQ9Y6W8 199 aa13.67□□□□□ -0.22
CLTA-202ENST00000345519 CIDEAO60543 219 aa13.66□□□□□ -0.22
CLTA-202ENST00000345519 CST9LP1Q5W188 147 aa13.66□□□□□ -0.22
CLTA-202ENST00000345519 SLC51BQ86UW2 128 aa13.66□□□□□ -0.22
CLTA-202ENST00000345519 UBE2G1P62253 170 aa13.65□□□□□ -0.22
CLTA-202ENST00000345519 AKAP14Q86UN6 197 aa13.65□□□□□ -0.22
CLTA-202ENST00000345519 MLST8Q9BVC4 326 aa13.65□□□□□ -0.22
CLTA-202ENST00000345519 Q9H8V8 135 aa13.65□□□□□ -0.22
CLTA-202ENST00000345519 TRGV4A0A0C4DH28 118 aa13.64□□□□□ -0.23
CLTA-202ENST00000345519 A0A1W2PPQ1 181 aa13.64□□□□□ -0.23
CLTA-202ENST00000345519 RS1O15537 224 aa13.64□□□□□ -0.23
CLTA-202ENST00000345519 S100A9P06702 114 aaKnown RBP13.64□□□□□ -0.23
CLTA-202ENST00000345519 GATA1P15976 413 aaPredicted RBP13.64□□□□□ -0.23
CLTA-202ENST00000345519 AKR1C3P42330 323 aa13.64□□□□□ -0.23
CLTA-202ENST00000345519 MRPL23Q16540 153 aaKnown RBP13.64□□□□□ -0.23
CLTA-202ENST00000345519 ZNF876PQ49A33 203 aa13.64□□□□□ -0.23
CLTA-202ENST00000345519 C9orf62Q8N4C0 152 aa13.64□□□□□ -0.23
CLTA-202ENST00000345519 OR4C5Q8NGB2 326 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms