RNA–Protein interactions for RNA: ENST00000345009.8

SNCA-202, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 1,096 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-202ENST00000345009 BAGE2Q86Y30 109 aa8.5□□□□□ -1.05
SNCA-202ENST00000345009 TMEM183AQ8IXX5 376 aa8.5□□□□□ -1.05
SNCA-202ENST00000345009 NAGKQ9UJ70 344 aa8.5□□□□□ -1.05
SNCA-202ENST00000345009 TMEM250H0YL14 139 aa8.49□□□□□ -1.05
SNCA-202ENST00000345009 RPL35P42766 123 aaKnown RBP8.49□□□□□ -1.05
SNCA-202ENST00000345009 TDRG1Q3Y452 100 aa8.49□□□□□ -1.05
SNCA-202ENST00000345009 MUC21Q5SSG8 566 aa8.49□□□□□ -1.05
SNCA-202ENST00000345009 IBA57Q5T440 356 aaKnown RBP8.49□□□□□ -1.05
SNCA-202ENST00000345009 FAM162BQ5T6X4 162 aa8.49□□□□□ -1.05
SNCA-202ENST00000345009 FAM222AQ5U5X8 452 aa8.49□□□□□ -1.05
SNCA-202ENST00000345009 ZNF767PQ75MW2 155 aa8.49□□□□□ -1.05
SNCA-202ENST00000345009 COX8CQ7Z4L0 72 aa8.49□□□□□ -1.05
SNCA-202ENST00000345009 RNASE8Q8TDE3 154 aaKnown RBP8.49□□□□□ -1.05
SNCA-202ENST00000345009 C8orf49Q96NF6 230 aa8.49□□□□□ -1.05
SNCA-202ENST00000345009 SDF2L1Q9HCN8 221 aa8.49□□□□□ -1.05
SNCA-202ENST00000345009 DKK2Q9UBU2 259 aa8.49□□□□□ -1.05
SNCA-202ENST00000345009 NDUFS6O75380 124 aaKnown RBP8.48□□□□□ -1.05
SNCA-202ENST00000345009 PRM2P04554 102 aa8.48□□□□□ -1.05
SNCA-202ENST00000345009 GNG4P50150 75 aa8.48□□□□□ -1.05
SNCA-202ENST00000345009 NANOS2P60321 138 aaKnown RBP8.48□□□□□ -1.05
SNCA-202ENST00000345009 DAD1P61803 113 aa8.48□□□□□ -1.05
SNCA-202ENST00000345009 ZNF415Q09FC8 603 aa8.48□□□□□ -1.05
SNCA-202ENST00000345009 ZNF506Q5JVG8 444 aa8.48□□□□□ -1.05
SNCA-202ENST00000345009 NOP10Q9NPE3 64 aaKnown RBP8.48□□□□□ -1.05
SNCA-202ENST00000345009 BIN3Q9NQY0 253 aa8.48□□□□□ -1.05
SNCA-202ENST00000345009 KLK5Q9Y337 293 aaPredicted RBP8.48□□□□□ -1.05
SNCA-202ENST00000345009 NUPR2A6NF83 97 aa8.47□□□□□ -1.05
SNCA-202ENST00000345009 ORM1P02763 201 aa8.47□□□□□ -1.05
SNCA-202ENST00000345009 DAZ2Q13117 558 aaKnown RBP8.47□□□□□ -1.05
SNCA-202ENST00000345009 PEA15Q15121 130 aa8.47□□□□□ -1.05
SNCA-202ENST00000345009 TOR2AQ5JU69 321 aa8.47□□□□□ -1.05
SNCA-202ENST00000345009 SMIM12Q96EX1 92 aa8.47□□□□□ -1.05
SNCA-202ENST00000345009 SPXQ9BT56 116 aa8.47□□□□□ -1.05
SNCA-202ENST00000345009 TRAV10A0A0B4J240 114 aa8.46□□□□□ -1.06
SNCA-202ENST00000345009 DEFB130BP0DP73 79 aa8.46□□□□□ -1.06
SNCA-202ENST00000345009 DEFB130AP0DP74 79 aa8.46□□□□□ -1.06
SNCA-202ENST00000345009 ZNF80P51504 273 aaPredicted RBP8.46□□□□□ -1.06
SNCA-202ENST00000345009 TCL1AP56279 114 aa8.46□□□□□ -1.06
SNCA-202ENST00000345009 PHLDA1Q8WV24 401 aaPredicted RBP8.46□□□□□ -1.06
SNCA-202ENST00000345009 DAZAP1Q96EP5 407 aaKnown RBP8.46□□□□□ -1.06
SNCA-202ENST00000345009 ZC2HC1AQ96GY0 325 aa8.46□□□□□ -1.06
SNCA-202ENST00000345009 SMDT1Q9H4I9 107 aa8.46□□□□□ -1.06
SNCA-202ENST00000345009 GSN-AS1Q9NRJ2 163 aa8.46□□□□□ -1.06
SNCA-202ENST00000345009 H3BS24 57 aa8.45□□□□□ -1.06
SNCA-202ENST00000345009 S100A4P26447 101 aaKnown RBP8.45□□□□□ -1.06
SNCA-202ENST00000345009 ZNF674Q2M3X9 581 aa8.45□□□□□ -1.06
SNCA-202ENST00000345009 C12orf74Q32Q52 190 aa8.45□□□□□ -1.06
SNCA-202ENST00000345009 LGALS9BQ3B8N2 356 aa8.45□□□□□ -1.06
SNCA-202ENST00000345009 CENPWQ5EE01 88 aa8.45□□□□□ -1.06
SNCA-202ENST00000345009 ZFAND6Q6FIF0 208 aa8.45□□□□□ -1.06
SNCA-202ENST00000345009 CEMP1Q6PRD7 247 aaPredicted RBP8.45□□□□□ -1.06
SNCA-202ENST00000345009 Q6ZQT7 251 aa8.45□□□□□ -1.06
SNCA-202ENST00000345009 DERL1Q9BUN8 251 aa8.45□□□□□ -1.06
SNCA-202ENST00000345009 TP53TG3Q9ULZ0 132 aa8.45□□□□□ -1.06
SNCA-202ENST00000345009 CELA1Q9UNI1 258 aa8.45□□□□□ -1.06
SNCA-202ENST00000345009 TRGV2A0A075B6R0 118 aa8.44□□□□□ -1.06
SNCA-202ENST00000345009 KRTAP4-8A0A0G2JLE6 195 aa8.44□□□□□ -1.06
SNCA-202ENST00000345009 PLAC8L1A1L4L8 177 aa8.44□□□□□ -1.06
SNCA-202ENST00000345009 B4DEV8 164 aa8.44□□□□□ -1.06
SNCA-202ENST00000345009 SH2D1AO60880 128 aa8.44□□□□□ -1.06
SNCA-202ENST00000345009 MGST1P10620 155 aaKnown RBP8.44□□□□□ -1.06
SNCA-202ENST00000345009 CEBPGP53567 150 aa8.44□□□□□ -1.06
SNCA-202ENST00000345009 CASC10Q5T4H9 136 aa8.44□□□□□ -1.06
SNCA-202ENST00000345009 Q6ZTC4 211 aa8.44□□□□□ -1.06
SNCA-202ENST00000345009 NHLRC2Q8NBF2 726 aa8.44□□□□□ -1.06
SNCA-202ENST00000345009 C11orf72Q8NBR9 251 aa8.44□□□□□ -1.06
SNCA-202ENST00000345009 PCNPQ8WW12 178 aaKnown RBP8.44□□□□□ -1.06
SNCA-202ENST00000345009 MLST8Q9BVC4 326 aa8.44□□□□□ -1.06
SNCA-202ENST00000345009 DEFB131BA0A096LNP1 70 aa8.43□□□□□ -1.06
SNCA-202ENST00000345009 TRGV1A0A0A0MS02 117 aa8.43□□□□□ -1.06
SNCA-202ENST00000345009 IGHV3-16A0A0C4DH30 117 aa8.43□□□□□ -1.06
SNCA-202ENST00000345009 RAB19A4D1S5 217 aa8.43□□□□□ -1.06
SNCA-202ENST00000345009 GNRH2O43555 120 aa8.43□□□□□ -1.06
SNCA-202ENST00000345009 ATP5G1P05496 136 aa8.43□□□□□ -1.06
SNCA-202ENST00000345009 ASIPP42127 132 aa8.43□□□□□ -1.06
SNCA-202ENST00000345009 CRIP1P50238 77 aa8.43□□□□□ -1.06
SNCA-202ENST00000345009 OR5I1Q13606 314 aa8.43□□□□□ -1.06
SNCA-202ENST00000345009 PRR27Q6MZM9 219 aa8.43□□□□□ -1.06
SNCA-202ENST00000345009 MDFICQ9P1T7 246 aa8.43□□□□□ -1.06
SNCA-202ENST00000345009 TENM2Q9NT68 2774 aa8.43□□□□□ -1.06
SNCA-202ENST00000345009 GAGE12BA1L429 117 aa8.42□□□□□ -1.06
SNCA-202ENST00000345009 C9JCJ5 164 aa8.42□□□□□ -1.06
SNCA-202ENST00000345009 M0R2P5 195 aa8.42□□□□□ -1.06
SNCA-202ENST00000345009 SPINK4O60575 86 aa8.42□□□□□ -1.06
SNCA-202ENST00000345009 GAGE7O76087 117 aa8.42□□□□□ -1.06
SNCA-202ENST00000345009 TYMSP04818 313 aa8.42□□□□□ -1.06
SNCA-202ENST00000345009 GAGE12FP0CL80 117 aa8.42□□□□□ -1.06
SNCA-202ENST00000345009 GAGE12GP0CL81 117 aa8.42□□□□□ -1.06
SNCA-202ENST00000345009 GAGE12IP0CL82 117 aa8.42□□□□□ -1.06
SNCA-202ENST00000345009 HTN3P15516 51 aa8.42□□□□□ -1.06
SNCA-202ENST00000345009 TCTAP57738 103 aa8.42□□□□□ -1.06
SNCA-202ENST00000345009 FAM74A3Q4VXF1 159 aa8.42□□□□□ -1.06
SNCA-202ENST00000345009 FAM210BQ96KR6 192 aa8.42□□□□□ -1.06
SNCA-202ENST00000345009 SMIM7Q9BQ49 75 aa8.42□□□□□ -1.06
SNCA-202ENST00000345009 PARLQ9H300 379 aa8.42□□□□□ -1.06
SNCA-202ENST00000345009 IGKV3D-20A0A0C4DH25 116 aa8.41□□□□□ -1.06
SNCA-202ENST00000345009 XKRY2A2RUG3 117 aa8.41□□□□□ -1.06
SNCA-202ENST00000345009 ZNF727A8MUV8 499 aa8.41□□□□□ -1.06
SNCA-202ENST00000345009 KRBOX1C9JBD0 128 aa8.41□□□□□ -1.06
SNCA-202ENST00000345009 M0R036 132 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms