RNA–Protein interactions for RNA: ENST00000343060.4

HOXA1-201, Transcript of homeobox A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA1, Length 2,517 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1-201ENST00000343060 TCL1BO95988 128 aa7.37□□□□□ -1.23
HOXA1-201ENST00000343060 ZNF688P0C7X2 276 aa7.37□□□□□ -1.23
HOXA1-201ENST00000343060 EBI3Q14213 229 aa7.37□□□□□ -1.23
HOXA1-201ENST00000343060 C2orf66Q6UXQ4 117 aa7.37□□□□□ -1.23
HOXA1-201ENST00000343060 PIP4P1Q86T03 277 aa7.37□□□□□ -1.23
HOXA1-201ENST00000343060 PTH2Q96A98 100 aa7.37□□□□□ -1.23
HOXA1-201ENST00000343060 RNF183Q96D59 192 aa7.37□□□□□ -1.23
HOXA1-201ENST00000343060 CITED1Q99966 193 aa7.37□□□□□ -1.23
HOXA1-201ENST00000343060 LENEPQ9Y5L5 61 aa7.37□□□□□ -1.23
HOXA1-201ENST00000343060 SMG1Q96Q15 3661 aaKnown RBP7.37□□□□□ -1.23
HOXA1-201ENST00000343060 WDFY4Q6ZS81 3184 aa7.37□□□□□ -1.23
HOXA1-201ENST00000343060 LOC107984156A0A0G2JMH3 177 aa7.37□□□□□ -1.23
HOXA1-201ENST00000343060 A8MWV9 139 aa7.37□□□□□ -1.23
HOXA1-201ENST00000343060 ARL17AQ8IVW1 177 aa7.37□□□□□ -1.23
HOXA1-201ENST00000343060 TMEM262E9PQX1 116 aa7.36□□□□□ -1.23
HOXA1-201ENST00000343060 H3BVH4 76 aa7.36□□□□□ -1.23
HOXA1-201ENST00000343060 M0R1W7 72 aa7.36□□□□□ -1.23
HOXA1-201ENST00000343060 SCGB1D4Q6XE38 83 aa7.36□□□□□ -1.23
HOXA1-201ENST00000343060 VKORC1Q9BQB6 163 aa7.36□□□□□ -1.23
HOXA1-201ENST00000343060 IGLV4-69A0A075B6H9 119 aa7.36□□□□□ -1.23
HOXA1-201ENST00000343060 IGHV7-81A0A0B4J1V7 117 aa7.36□□□□□ -1.23
HOXA1-201ENST00000343060 IGHV1-69DA0A0B4J2H0 117 aa7.36□□□□□ -1.23
HOXA1-201ENST00000343060 LINC01548A6NM66 108 aa7.36□□□□□ -1.23
HOXA1-201ENST00000343060 CRYGDP07320 174 aa7.36□□□□□ -1.23
HOXA1-201ENST00000343060 MED14OSP0DP75 135 aa7.36□□□□□ -1.23
HOXA1-201ENST00000343060 RPL32P62910 135 aaKnown RBP7.36□□□□□ -1.23
HOXA1-201ENST00000343060 SRSF9Q13242 221 aaKnown RBP eCLIP7.36□□□□□ -1.23
HOXA1-201ENST00000343060 HES1Q14469 280 aa7.36□□□□□ -1.23
HOXA1-201ENST00000343060 PAPPA-AS1Q5QFB9 102 aa7.36□□□□□ -1.23
HOXA1-201ENST00000343060 C10orf126Q8N4M7 172 aa7.36□□□□□ -1.23
HOXA1-201ENST00000343060 POM121L12Q8N7R1 296 aa7.36□□□□□ -1.23
HOXA1-201ENST00000343060 FAM110DQ8TAY7 271 aaPredicted RBP7.36□□□□□ -1.23
HOXA1-201ENST00000343060 KLK15Q9H2R5 256 aa7.36□□□□□ -1.23
HOXA1-201ENST00000343060 DPH3P1Q9H4G8 78 aa7.36□□□□□ -1.23
HOXA1-201ENST00000343060 TNRC18O15417 2968 aaPredicted RBP7.36□□□□□ -1.23
HOXA1-201ENST00000343060 OOSP1A8MZH6 123 aa7.35□□□□□ -1.23
HOXA1-201ENST00000343060 LYNX1G3V0Z9 82 aa7.35□□□□□ -1.23
HOXA1-201ENST00000343060 IGHV3-30P01768 117 aa7.35□□□□□ -1.23
HOXA1-201ENST00000343060 IGHV3-30-5P0DP03 117 aa7.35□□□□□ -1.23
HOXA1-201ENST00000343060 LYNX1P0DP58 116 aa7.35□□□□□ -1.23
HOXA1-201ENST00000343060 SRD5A1P18405 259 aa7.35□□□□□ -1.23
HOXA1-201ENST00000343060 GATA3P23771 443 aa7.35□□□□□ -1.23
HOXA1-201ENST00000343060 PRR9Q5T870 116 aa7.35□□□□□ -1.23
HOXA1-201ENST00000343060 ANKRD29Q8N6D5 301 aa7.35□□□□□ -1.23
HOXA1-201ENST00000343060 LINC01600Q96MT4 127 aa7.35□□□□□ -1.23
HOXA1-201ENST00000343060 U3KQE9 123 aa7.35□□□□□ -1.23
HOXA1-201ENST00000343060 IGHV3OR16-8A0A075B7F1 116 aa7.35□□□□□ -1.23
HOXA1-201ENST00000343060 CFC1BP0CG36 223 aa7.35□□□□□ -1.23
HOXA1-201ENST00000343060 CFC1P0CG37 223 aa7.35□□□□□ -1.23
HOXA1-201ENST00000343060 HERVK_113P61574 105 aa7.35□□□□□ -1.23
HOXA1-201ENST00000343060 Q6ZQT7 251 aa7.35□□□□□ -1.23
HOXA1-201ENST00000343060 RPL39LQ96EH5 51 aaKnown RBP7.35□□□□□ -1.23
HOXA1-201ENST00000343060 ZNF318Q5VUA4 2279 aa7.34□□□□□ -1.23
HOXA1-201ENST00000343060 C11orf86A6NJI1 115 aa7.34□□□□□ -1.23
HOXA1-201ENST00000343060 PPP1R17O96001 155 aa7.34□□□□□ -1.23
HOXA1-201ENST00000343060 PRTN3P24158 256 aa7.34□□□□□ -1.23
HOXA1-201ENST00000343060 ZFAND6Q6FIF0 208 aa7.34□□□□□ -1.23
HOXA1-201ENST00000343060 SLC25A29Q8N8R3 303 aa7.34□□□□□ -1.23
HOXA1-201ENST00000343060 TSHBP01222 138 aa7.34□□□□□ -1.23
HOXA1-201ENST00000343060 ITLN2Q8WWU7 325 aaPredicted RBP7.34□□□□□ -1.23
HOXA1-201ENST00000343060 AMELXQ99217 191 aa7.34□□□□□ -1.23
HOXA1-201ENST00000343060 ANAPC13Q9BS18 74 aa7.34□□□□□ -1.23
HOXA1-201ENST00000343060 IGHV3-35A0A0C4DH35 117 aa7.33□□□□□ -1.24
HOXA1-201ENST00000343060 ASIPP42127 132 aa7.33□□□□□ -1.24
HOXA1-201ENST00000343060 C15orf32Q32M92 178 aa7.33□□□□□ -1.24
HOXA1-201ENST00000343060 GPHB5Q86YW7 130 aa7.33□□□□□ -1.24
HOXA1-201ENST00000343060 KLHL30-AS1Q8NEE0 82 aa7.33□□□□□ -1.24
HOXA1-201ENST00000343060 CCDC140Q96MF4 163 aa7.33□□□□□ -1.24
HOXA1-201ENST00000343060 IGIPA6NJ69 53 aa7.33□□□□□ -1.24
HOXA1-201ENST00000343060 NXPH4O95158 308 aa7.33□□□□□ -1.24
HOXA1-201ENST00000343060 GAGE5Q13069 117 aa7.33□□□□□ -1.24
HOXA1-201ENST00000343060 GAGE6Q13070 117 aa7.33□□□□□ -1.24
HOXA1-201ENST00000343060 SFTA2Q6UW10 78 aa7.33□□□□□ -1.24
HOXA1-201ENST00000343060 ZFAND2AQ8N6M9 145 aa7.33□□□□□ -1.24
HOXA1-201ENST00000343060 Q8N9W7 124 aa7.33□□□□□ -1.24
HOXA1-201ENST00000343060 DUSP14O95147 198 aaKnown RBP7.32□□□□□ -1.24
HOXA1-201ENST00000343060 NHLRC4P0CG21 123 aaPredicted RBP7.32□□□□□ -1.24
HOXA1-201ENST00000343060 TSPEAR-AS2P59090 65 aa7.32□□□□□ -1.24
HOXA1-201ENST00000343060 Q6ZS46 218 aa7.32□□□□□ -1.24
HOXA1-201ENST00000343060 TEX29Q8N6K0 151 aa7.32□□□□□ -1.24
HOXA1-201ENST00000343060 AJUBAQ96IF1 538 aa7.32□□□□□ -1.24
HOXA1-201ENST00000343060 KIR2DL4Q99706 377 aa7.32□□□□□ -1.24
HOXA1-201ENST00000343060 PRO1854Q9UHT4 67 aa7.32□□□□□ -1.24
HOXA1-201ENST00000343060 KALRNO60229 2985 aa7.32□□□□□ -1.24
HOXA1-201ENST00000343060 RHODO00212 210 aa7.32□□□□□ -1.24
HOXA1-201ENST00000343060 CLEC3BP05452 202 aa7.32□□□□□ -1.24
HOXA1-201ENST00000343060 MINOS1Q5TGZ0 78 aa7.32□□□□□ -1.24
HOXA1-201ENST00000343060 C9orf139Q6ZV77 190 aa7.32□□□□□ -1.24
HOXA1-201ENST00000343060 VMO1Q7Z5L0 202 aa7.32□□□□□ -1.24
HOXA1-201ENST00000343060 METTL26Q96S19 204 aa7.32□□□□□ -1.24
HOXA1-201ENST00000343060 MINOS1-NBL1R4GNA1 71 aa7.32□□□□□ -1.24
HOXA1-201ENST00000343060 MUC3AQ02505 3323 aa7.31□□□□□ -1.24
HOXA1-201ENST00000343060 IGHV4OR15-8A0A075B7B6 117 aa7.31□□□□□ -1.24
HOXA1-201ENST00000343060 A0A087WW49 117 aa7.31□□□□□ -1.24
HOXA1-201ENST00000343060 TRAV21A0A0B4J279 112 aa7.31□□□□□ -1.24
HOXA1-201ENST00000343060 IGHV3-66A0A0C4DH42 116 aa7.31□□□□□ -1.24
HOXA1-201ENST00000343060 SLC25A20O43772 301 aa7.31□□□□□ -1.24
HOXA1-201ENST00000343060 CD3EP07766 207 aa7.31□□□□□ -1.24
HOXA1-201ENST00000343060 P0DMU3 169 aa7.31□□□□□ -1.24
HOXA1-201ENST00000343060 FAM231AP0DMU4 169 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms