RNA–Protein interactions for RNA: ENST00000342785.8

VCAN-202, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 7,154 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-202ENST00000342785 TMEM238C9JI98 176 aa5.61□□□□□ -1.51
VCAN-202ENST00000342785 SPRY2O43597 315 aa5.61□□□□□ -1.51
VCAN-202ENST00000342785 FOXE3Q13461 319 aa5.61□□□□□ -1.51
VCAN-202ENST00000342785 Q8N9W7 124 aa5.61□□□□□ -1.51
VCAN-202ENST00000342785 FANCD2OSQ96PS1 177 aa5.61□□□□□ -1.51
VCAN-202ENST00000342785 TTC32Q5I0X7 151 aa5.61□□□□□ -1.51
VCAN-202ENST00000342785 LINC01356Q8N9X3 169 aa5.61□□□□□ -1.51
VCAN-202ENST00000342785 TRAV8-2A0A0B4J237 113 aa5.61□□□□□ -1.51
VCAN-202ENST00000342785 RNF223E7ERA6 249 aa5.61□□□□□ -1.51
VCAN-202ENST00000342785 F8VRH5 84 aa5.61□□□□□ -1.51
VCAN-202ENST00000342785 GATA3P23771 443 aa5.61□□□□□ -1.51
VCAN-202ENST00000342785 ANKRD39Q53RE8 183 aa5.61□□□□□ -1.51
VCAN-202ENST00000342785 CFHR4Q92496 578 aa5.61□□□□□ -1.51
VCAN-202ENST00000342785 C19orf71A6NCJ1 209 aa5.61□□□□□ -1.51
VCAN-202ENST00000342785 LINC00322Q6ZN03 302 aaPredicted RBP5.61□□□□□ -1.51
VCAN-202ENST00000342785 TRGV1A0A0A0MS02 117 aa5.61□□□□□ -1.51
VCAN-202ENST00000342785 A0A1B0GV72 72 aa5.61□□□□□ -1.51
VCAN-202ENST00000342785 PCP2Q8IVA1 136 aa5.61□□□□□ -1.51
VCAN-202ENST00000342785 PRAC2D3DTV9 90 aa5.6□□□□□ -1.51
VCAN-202ENST00000342785 SIGMAR1Q99720 223 aa5.6□□□□□ -1.51
VCAN-202ENST00000342785 KLK9Q9UKQ9 250 aa5.6□□□□□ -1.51
VCAN-202ENST00000342785 C9orf118A6NHY6 69 aa5.6□□□□□ -1.51
VCAN-202ENST00000342785 ADORA2A-AS1P86434 159 aa5.6□□□□□ -1.51
VCAN-202ENST00000342785 LINC01545Q5VT33 79 aa5.6□□□□□ -1.51
VCAN-202ENST00000342785 UBE2E2Q96LR5 201 aa5.6□□□□□ -1.51
VCAN-202ENST00000342785 LENEPQ9Y5L5 61 aa5.6□□□□□ -1.51
VCAN-202ENST00000342785 TRGV4A0A0C4DH28 118 aa5.6□□□□□ -1.51
VCAN-202ENST00000342785 IGHV4-61A0A0C4DH41 118 aa5.6□□□□□ -1.51
VCAN-202ENST00000342785 RPL36AP83881 106 aaKnown RBP5.6□□□□□ -1.51
VCAN-202ENST00000342785 ETDBQ3ZM63 59 aa5.6□□□□□ -1.51
VCAN-202ENST00000342785 RPL36ALQ969Q0 106 aaKnown RBP5.6□□□□□ -1.51
VCAN-202ENST00000342785 SPXQ9BT56 116 aa5.6□□□□□ -1.51
VCAN-202ENST00000342785 TRAV12-2A0A075B6T6 113 aa5.6□□□□□ -1.51
VCAN-202ENST00000342785 IGHV7-4-1A0A0J9YVY3 117 aa5.6□□□□□ -1.51
VCAN-202ENST00000342785 IGHV4-39P01824 125 aa5.6□□□□□ -1.51
VCAN-202ENST00000342785 ZFP36P26651 326 aaKnown RBP5.6□□□□□ -1.51
VCAN-202ENST00000342785 DEFB125Q8N687 156 aa5.6□□□□□ -1.51
VCAN-202ENST00000342785 MBD6Q96DN6 1003 aa5.6□□□□□ -1.51
VCAN-202ENST00000342785 PRADC1Q9BSG0 188 aa5.6□□□□□ -1.51
VCAN-202ENST00000342785 ZNF415Q09FC8 603 aa5.6□□□□□ -1.51
VCAN-202ENST00000342785 FBXL19-AS1Q494R0 122 aa5.6□□□□□ -1.51
VCAN-202ENST00000342785 LY6G5BQ8NDX9 201 aa5.6□□□□□ -1.51
VCAN-202ENST00000342785 KLHL30-AS1Q8NEE0 82 aa5.6□□□□□ -1.51
VCAN-202ENST00000342785 C1orf159Q96HA4 380 aa5.6□□□□□ -1.51
VCAN-202ENST00000342785 CHCHD5Q9BSY4 110 aa5.6□□□□□ -1.51
VCAN-202ENST00000342785 IGHV1OR15-1A0A075B7D0 117 aa5.6□□□□□ -1.51
VCAN-202ENST00000342785 WI2-2373I1.2A0A1W2PRP0 233 aa5.6□□□□□ -1.51
VCAN-202ENST00000342785 MLST8Q9BVC4 326 aa5.6□□□□□ -1.51
VCAN-202ENST00000342785 IGHV3-53P01767 116 aa5.59□□□□□ -1.51
VCAN-202ENST00000342785 BLCAPP62952 87 aa5.59□□□□□ -1.51
VCAN-202ENST00000342785 DLX4Q92988 240 aaPredicted RBP5.59□□□□□ -1.51
VCAN-202ENST00000342785 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.59□□□□□ -1.51
VCAN-202ENST00000342785 C2orf70A6NJV1 201 aa5.59□□□□□ -1.51
VCAN-202ENST00000342785 TRPT1Q86TN4 253 aaKnown RBP5.59□□□□□ -1.51
VCAN-202ENST00000342785 A0A1B0GXF2 115 aa5.59□□□□□ -1.51
VCAN-202ENST00000342785 CDKN1BP46527 198 aa5.59□□□□□ -1.51
VCAN-202ENST00000342785 PMVKQ15126 192 aa5.59□□□□□ -1.51
VCAN-202ENST00000342785 TRBV7-9A0A0J9YWB2 115 aa5.59□□□□□ -1.51
VCAN-202ENST00000342785 RBAKDNA6NC62 111 aa5.59□□□□□ -1.51
VCAN-202ENST00000342785 GNRH2O43555 120 aa5.59□□□□□ -1.51
VCAN-202ENST00000342785 HLA-DRB4P13762 266 aa5.59□□□□□ -1.51
VCAN-202ENST00000342785 ADAMTSL5Q6ZMM2 481 aa5.59□□□□□ -1.51
VCAN-202ENST00000342785 PHLDA1Q8WV24 401 aaPredicted RBP5.59□□□□□ -1.51
VCAN-202ENST00000342785 C20orf78Q9BR46 151 aa5.59□□□□□ -1.51
VCAN-202ENST00000342785 HLA-DRB4X5D2U9 266 aa5.59□□□□□ -1.51
VCAN-202ENST00000342785 PAX2Q02962 417 aa5.59□□□□□ -1.52
VCAN-202ENST00000342785 TCTEX1D4Q5JR98 221 aa5.59□□□□□ -1.52
VCAN-202ENST00000342785 K7EP13 123 aa5.59□□□□□ -1.52
VCAN-202ENST00000342785 GDF5OSQ5U4N7 250 aa5.59□□□□□ -1.52
VCAN-202ENST00000342785 MRPL53Q96EL3 112 aaKnown RBP5.59□□□□□ -1.52
VCAN-202ENST00000342785 SAP30O75446 220 aa5.58□□□□□ -1.52
VCAN-202ENST00000342785 XCL2Q9UBD3 114 aa5.58□□□□□ -1.52
VCAN-202ENST00000342785 CHD3Q12873 2000 aaKnown RBP5.58□□□□□ -1.52
VCAN-202ENST00000342785 POLQO75417 2590 aa5.58□□□□□ -1.52
VCAN-202ENST00000342785 RNASE1P07998 156 aaKnown RBP5.58□□□□□ -1.52
VCAN-202ENST00000342785 MTURNQ8N3F0 131 aa5.58□□□□□ -1.52
VCAN-202ENST00000342785 TTTY13Q9BZ97 58 aa5.58□□□□□ -1.52
VCAN-202ENST00000342785 INSP01308 110 aa5.58□□□□□ -1.52
VCAN-202ENST00000342785 MORN3Q6PF18 240 aaPredicted RBP5.58□□□□□ -1.52
VCAN-202ENST00000342785 TIMM21Q9BVV7 248 aa5.58□□□□□ -1.52
VCAN-202ENST00000342785 GTSF1LQ9H1H1 148 aa5.58□□□□□ -1.52
VCAN-202ENST00000342785 TP53TG3Q9ULZ0 132 aa5.58□□□□□ -1.52
VCAN-202ENST00000342785 CCL25O15444 150 aa5.58□□□□□ -1.52
VCAN-202ENST00000342785 NPC2P61916 151 aa5.58□□□□□ -1.52
VCAN-202ENST00000342785 FN1P02751 2386 aaKnown RBP5.58□□□□□ -1.52
VCAN-202ENST00000342785 TRAV13-1A0A0B4J241 112 aa5.58□□□□□ -1.52
VCAN-202ENST00000342785 PRSS29PA6NIE9 313 aa5.58□□□□□ -1.52
VCAN-202ENST00000342785 M0R2P5 195 aa5.58□□□□□ -1.52
VCAN-202ENST00000342785 SP5Q6BEB4 398 aaPredicted RBP5.58□□□□□ -1.52
VCAN-202ENST00000342785 ADARB2-AS1A8MUL3 147 aa5.57□□□□□ -1.52
VCAN-202ENST00000342785 SIVA1O15304 175 aa5.57□□□□□ -1.52
VCAN-202ENST00000342785 HTN3P15516 51 aa5.57□□□□□ -1.52
VCAN-202ENST00000342785 A0A087WX48 190 aa5.57□□□□□ -1.52
VCAN-202ENST00000342785 K7EP34 96 aa5.57□□□□□ -1.52
VCAN-202ENST00000342785 RHODO00212 210 aa5.57□□□□□ -1.52
VCAN-202ENST00000342785 IGHV4-59P01825 116 aa5.57□□□□□ -1.52
VCAN-202ENST00000342785 TMEM95Q3KNT9 176 aa5.57□□□□□ -1.52
VCAN-202ENST00000342785 TMEM141Q96I45 108 aa5.57□□□□□ -1.52
VCAN-202ENST00000342785 TRBV25-1A0A075B6N4 114 aa5.57□□□□□ -1.52
VCAN-202ENST00000342785 MYMXA0A1B0GTQ4 84 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 114.3 ms