RNA–Protein interactions for RNA: ENST00000341181.10

CLDND1-201, Transcript of claudin domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDND1, Length 2,161 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-201ENST00000341181 SMUG1Q53HV7 270 aa15.14■□□□□ 0.01
CLDND1-201ENST00000341181 TRAPPC1Q9Y5R8 145 aa15.14■□□□□ 0.01
CLDND1-201ENST00000341181 FBLL1A6NHQ2 334 aaKnown RBP15.14■□□□□ 0.01
CLDND1-201ENST00000341181 P01737 135 aa15.14■□□□□ 0.01
CLDND1-201ENST00000341181 NUP35Q8NFH5 326 aa15.14■□□□□ 0.01
CLDND1-201ENST00000341181 GTSF1Q8WW33 167 aa15.14■□□□□ 0.01
CLDND1-201ENST00000341181 RPP21Q9H633 154 aaKnown RBP15.13■□□□□ 0.01
CLDND1-201ENST00000341181 HIGD1CA8MV81 97 aa15.12■□□□□ 0.01
CLDND1-201ENST00000341181 AKR1D1P51857 326 aa15.12■□□□□ 0.01
CLDND1-201ENST00000341181 NDFIP1Q9BT67 221 aa15.12■□□□□ 0.01
CLDND1-201ENST00000341181 CRISP2P16562 243 aa15.12■□□□□ 0.01
CLDND1-201ENST00000341181 PDZD11Q5EBL8 140 aa15.12■□□□□ 0.01
CLDND1-201ENST00000341181 SAPCD1Q5SSQ6 148 aa15.12■□□□□ 0.01
CLDND1-201ENST00000341181 DAZAP1Q96EP5 407 aaKnown RBP15.12■□□□□ 0.01
CLDND1-201ENST00000341181 KLLNB2CW77 178 aa15.11■□□□□ 0.01
CLDND1-201ENST00000341181 TSKUQ8WUA8 353 aa15.11■□□□□ 0.01
CLDND1-201ENST00000341181 ODF3Q96PU9 254 aa15.11■□□□□ 0.01
CLDND1-201ENST00000341181 LENEPQ9Y5L5 61 aa15.11■□□□□ 0.01
CLDND1-201ENST00000341181 MEGF8Q7Z7M0 2845 aa15.11■□□□□ 0.01
CLDND1-201ENST00000341181 UBE2CO00762 179 aa15.11■□□□□ 0.01
CLDND1-201ENST00000341181 IGHV4-30-4P0DP06 118 aa15.11■□□□□ 0.01
CLDND1-201ENST00000341181 IFITM10A6NMD0 228 aa15.1■□□□□ 0.01
CLDND1-201ENST00000341181 SNURFLB1AK76 121 aa15.1■□□□□ 0.01
CLDND1-201ENST00000341181 CRXO43186 299 aaPredicted RBP15.1■□□□□ 0.01
CLDND1-201ENST00000341181 CDKN1BP46527 198 aa15.1■□□□□ 0.01
CLDND1-201ENST00000341181 COX8CQ7Z4L0 72 aa15.1■□□□□ 0.01
CLDND1-201ENST00000341181 GPX1P07203 203 aa15.09■□□□□ 0.01
CLDND1-201ENST00000341181 GIG44P09565 113 aaPredicted RBP15.09■□□□□ 0.01
CLDND1-201ENST00000341181 RNASE4P34096 147 aaKnown RBP15.09■□□□□ 0.01
CLDND1-201ENST00000341181 KPRPQ5T749 579 aaPredicted RBP15.09■□□□□ 0.01
CLDND1-201ENST00000341181 OR2D3Q8NGH3 330 aa15.09■□□□□ 0.01
CLDND1-201ENST00000341181 RBMY1A1P0DJD3 496 aaKnown RBP15.09■□□□□ 0.01
CLDND1-201ENST00000341181 RBMY1CP0DJD4 496 aa15.09■□□□□ 0.01
CLDND1-201ENST00000341181 RBMY1FQ15415 496 aaKnown RBP15.09■□□□□ 0.01
CLDND1-201ENST00000341181 TMSB15BA0A087X1C1 80 aa15.08■□□□□ 0.01
CLDND1-201ENST00000341181 TRBV7-9A0A0J9YWB2 115 aa15.08■□□□□ 0.01
CLDND1-201ENST00000341181 CLUHP3Q96NS8 147 aa15.08■□□□□ 0.01
CLDND1-201ENST00000341181 MRPL18Q9H0U6 180 aaKnown RBP15.08■□□□□ 0.01
CLDND1-201ENST00000341181 XCL2Q9UBD3 114 aa15.08■□□□□ 0.01
CLDND1-201ENST00000341181 NAT8BQ9UHF3 227 aa15.08■□□□□ 0.01
CLDND1-201ENST00000341181 TRAV9-1A0A075B6T8 112 aa15.08■□□□□ 0
CLDND1-201ENST00000341181 RAB4BP61018 213 aa15.08■□□□□ 0
CLDND1-201ENST00000341181 PGLYRP4Q96LB8 373 aa15.08■□□□□ 0
CLDND1-201ENST00000341181 TRAV12-3A0A0B4J271 114 aa15.07■□□□□ 0
CLDND1-201ENST00000341181 LEPP41159 167 aa15.07■□□□□ 0
CLDND1-201ENST00000341181 KIAA1644Q3SXP7 199 aa15.07■□□□□ 0
CLDND1-201ENST00000341181 TMEM136Q6ZRR5 245 aa15.07■□□□□ 0
CLDND1-201ENST00000341181 GRIFINA4D1Z8 144 aa15.07■□□□□ 0
CLDND1-201ENST00000341181 SH2D1AO60880 128 aa15.07■□□□□ 0
CLDND1-201ENST00000341181 HOXA5P20719 270 aa15.07■□□□□ 0
CLDND1-201ENST00000341181 C11orf21Q9P2W6 132 aa15.07■□□□□ 0
CLDND1-201ENST00000341181 ZMAT5Q9UDW3 170 aaKnown RBP15.07■□□□□ 0
CLDND1-201ENST00000341181 CAMPP49913 170 aa15.06■□□□□ 0
CLDND1-201ENST00000341181 FAM162BQ5T6X4 162 aa15.06■□□□□ 0
CLDND1-201ENST00000341181 ZNF575Q86XF7 245 aa15.05■□□□□ 0
CLDND1-201ENST00000341181 SSBP4Q9BWG4 385 aaPredicted RBP15.05■□□□□ 0
CLDND1-201ENST00000341181 XKRY2A2RUG3 117 aa15.05■□□□□ -0
CLDND1-201ENST00000341181 C7orf71A4D174 169 aa15.05■□□□□ -0
CLDND1-201ENST00000341181 A8MWL6 223 aa15.05■□□□□ -0
CLDND1-201ENST00000341181 TSPOP30536 169 aa15.05■□□□□ -0
CLDND1-201ENST00000341181 SSTP61278 116 aa15.04■□□□□ -0
CLDND1-201ENST00000341181 Q6AWC8 147 aa15.04■□□□□ -0
CLDND1-201ENST00000341181 ZNF324O75467 553 aaPredicted RBP15.04■□□□□ -0
CLDND1-201ENST00000341181 SLAQ13239 276 aa15.04■□□□□ -0
CLDND1-201ENST00000341181 CT83Q5H943 113 aa15.04■□□□□ -0
CLDND1-201ENST00000341181 GNB1LQ9BYB4 327 aa15.04■□□□□ -0
CLDND1-201ENST00000341181 NUTF2P61970 127 aaKnown RBP15.03■□□□□ -0
CLDND1-201ENST00000341181 TPPP3Q9BW30 176 aa15.03■□□□□ -0
CLDND1-201ENST00000341181 LOC102724200A0A096LPH7 203 aaPredicted RBP15.02■□□□□ -0
CLDND1-201ENST00000341181 MUC21Q5SSG8 566 aa15.02■□□□□ -0
CLDND1-201ENST00000341181 HIST3H2BBQ8N257 126 aa15.02■□□□□ -0
CLDND1-201ENST00000341181 NAGKQ9UJ70 344 aa15.02■□□□□ -0
CLDND1-201ENST00000341181 MUC21A0A0G2JKD1 596 aa15.02□□□□□ -0.01
CLDND1-201ENST00000341181 MUC21A0A140T8X8 626 aa15.02□□□□□ -0.01
CLDND1-201ENST00000341181 F2Z2F3 143 aa15.02□□□□□ -0.01
CLDND1-201ENST00000341181 K7EIL1 84 aa15.02□□□□□ -0.01
CLDND1-201ENST00000341181 PRM2P04554 102 aa15.02□□□□□ -0.01
CLDND1-201ENST00000341181 FABP5P3A8MUU1 101 aa15.01□□□□□ -0.01
CLDND1-201ENST00000341181 NUPR1O60356 82 aa15.01□□□□□ -0.01
CLDND1-201ENST00000341181 CSTL1Q9H114 145 aa15.01□□□□□ -0.01
CLDND1-201ENST00000341181 TRAV21A0A0B4J279 112 aa15.01□□□□□ -0.01
CLDND1-201ENST00000341181 TMEM256Q8N2U0 113 aa15.01□□□□□ -0.01
CLDND1-201ENST00000341181 IGKV3D-20A0A0C4DH25 116 aa15□□□□□ -0.01
CLDND1-201ENST00000341181 A0A1B0GXF2 115 aa15□□□□□ -0.01
CLDND1-201ENST00000341181 INSP01308 110 aa15□□□□□ -0.01
CLDND1-201ENST00000341181 CSNK1G2-AS1Q8NCQ2 148 aa15□□□□□ -0.01
CLDND1-201ENST00000341181 TP53TG3Q9ULZ0 132 aa15□□□□□ -0.01
CLDND1-201ENST00000341181 ARMS2P0C7Q2 107 aa15□□□□□ -0.01
CLDND1-201ENST00000341181 MORN3Q6PF18 240 aaPredicted RBP15□□□□□ -0.01
CLDND1-201ENST00000341181 C1orf158Q8N1D5 194 aa15□□□□□ -0.01
CLDND1-201ENST00000341181 GFRA4Q9GZZ7 299 aa15□□□□□ -0.01
CLDND1-201ENST00000341181 PRKDCP78527 4128 aaKnown RBP14.99□□□□□ -0.01
CLDND1-201ENST00000341181 ORM1P02763 201 aa14.99□□□□□ -0.01
CLDND1-201ENST00000341181 TENM3Q9P273 2699 aa14.98□□□□□ -0.01
CLDND1-201ENST00000341181 IGHV3OR16-12A0A075B7B8 117 aa14.98□□□□□ -0.01
CLDND1-201ENST00000341181 TMEM189A5PLL7 270 aa14.98□□□□□ -0.01
CLDND1-201ENST00000341181 ANXA2RQ3ZCQ2 193 aa14.98□□□□□ -0.01
CLDND1-201ENST00000341181 WDR73Q6P4I2 378 aa14.98□□□□□ -0.01
CLDND1-201ENST00000341181 A8MZ25 164 aa14.97□□□□□ -0.01
CLDND1-201ENST00000341181 FABP4P15090 132 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms