RNA–Protein interactions for RNA: ENST00000340424.4

SIRPB3P-201, Transcript of signal regulatory protein beta 3, pseudogene, humanhuman

BASIC

Gene SIRPB3P, Length 1,216 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPB3P-201ENST00000340424 EIF5A2Q9GZV4 153 aaKnown RBP9.41□□□□□ -0.9
SIRPB3P-201ENST00000340424 Q9H3A6 140 aa9.41□□□□□ -0.9
SIRPB3P-201ENST00000340424 NOP10Q9NPE3 64 aaKnown RBP9.41□□□□□ -0.9
SIRPB3P-201ENST00000340424 ZNF492Q9P255 531 aa9.41□□□□□ -0.9
SIRPB3P-201ENST00000340424 IGKV2-40A0A087WW87 121 aaPredicted RBP9.4□□□□□ -0.9
SIRPB3P-201ENST00000340424 RBFOX3A6NFN3 312 aa9.4□□□□□ -0.9
SIRPB3P-201ENST00000340424 ZNF324O75467 553 aaPredicted RBP9.4□□□□□ -0.9
SIRPB3P-201ENST00000340424 IGKV2D-40P01614 121 aaPredicted RBP9.4□□□□□ -0.9
SIRPB3P-201ENST00000340424 MBP02144 154 aa9.4□□□□□ -0.9
SIRPB3P-201ENST00000340424 SRP19P09132 144 aaKnown RBP9.4□□□□□ -0.9
SIRPB3P-201ENST00000340424 FHITP49789 147 aa9.4□□□□□ -0.9
SIRPB3P-201ENST00000340424 RAB2AP61019 212 aa9.4□□□□□ -0.9
SIRPB3P-201ENST00000340424 SOHLH1Q5JUK2 328 aa9.4□□□□□ -0.9
SIRPB3P-201ENST00000340424 MBD3L1Q8WWY6 194 aa9.4□□□□□ -0.9
SIRPB3P-201ENST00000340424 TCEAL7Q9BRU2 100 aa9.4□□□□□ -0.9
SIRPB3P-201ENST00000340424 RPS10P5Q9NQ39 176 aa9.4□□□□□ -0.9
SIRPB3P-201ENST00000340424 OTORQ9NRC9 128 aa9.4□□□□□ -0.9
SIRPB3P-201ENST00000340424 LENEPQ9Y5L5 61 aa9.4□□□□□ -0.9
SIRPB3P-201ENST00000340424 F5H768 121 aa9.39□□□□□ -0.91
SIRPB3P-201ENST00000340424 RAB5AP20339 215 aa9.39□□□□□ -0.91
SIRPB3P-201ENST00000340424 RNASE4P34096 147 aaKnown RBP9.39□□□□□ -0.91
SIRPB3P-201ENST00000340424 SERF2P84101 59 aa9.39□□□□□ -0.91
SIRPB3P-201ENST00000340424 ZFAND2AQ8N6M9 145 aa9.39□□□□□ -0.91
SIRPB3P-201ENST00000340424 OR10G9Q8NGN4 311 aa9.39□□□□□ -0.91
SIRPB3P-201ENST00000340424 OR10G7Q8NGN6 311 aa9.39□□□□□ -0.91
SIRPB3P-201ENST00000340424 VGLL1Q99990 258 aa9.39□□□□□ -0.91
SIRPB3P-201ENST00000340424 HECTD4Q9Y4D8 3996 aa9.38□□□□□ -0.91
SIRPB3P-201ENST00000340424 B4DEV8 164 aa9.38□□□□□ -0.91
SIRPB3P-201ENST00000340424 AKR1C8PQ5T2L2 129 aa9.38□□□□□ -0.91
SIRPB3P-201ENST00000340424 IBA57Q5T440 356 aaKnown RBP9.38□□□□□ -0.91
SIRPB3P-201ENST00000340424 CMTM2Q8TAZ6 248 aa9.38□□□□□ -0.91
SIRPB3P-201ENST00000340424 C18orf15Q96N68 181 aa9.38□□□□□ -0.91
SIRPB3P-201ENST00000340424 DIRC3C9JPN6 131 aa9.37□□□□□ -0.91
SIRPB3P-201ENST00000340424 M0R036 132 aa9.37□□□□□ -0.91
SIRPB3P-201ENST00000340424 CDC34P49427 236 aaPredicted RBP9.37□□□□□ -0.91
SIRPB3P-201ENST00000340424 LGALS9BQ3B8N2 356 aa9.37□□□□□ -0.91
SIRPB3P-201ENST00000340424 LINC00336Q6ZUF6 198 aa9.37□□□□□ -0.91
SIRPB3P-201ENST00000340424 C11orf72Q8NBR9 251 aa9.37□□□□□ -0.91
SIRPB3P-201ENST00000340424 C12orf57Q99622 126 aa9.37□□□□□ -0.91
SIRPB3P-201ENST00000340424 FAT2Q9NYQ8 4349 aa9.37□□□□□ -0.91
SIRPB3P-201ENST00000340424 IGHV1OR15-1A0A075B7D0 117 aa9.36□□□□□ -0.91
SIRPB3P-201ENST00000340424 SERTM2A0A1B0GWG4 89 aa9.36□□□□□ -0.91
SIRPB3P-201ENST00000340424 H3BNG1 76 aa9.36□□□□□ -0.91
SIRPB3P-201ENST00000340424 STAG3L2P0CL84 134 aa9.36□□□□□ -0.91
SIRPB3P-201ENST00000340424 STAG3L3P0CL85 134 aa9.36□□□□□ -0.91
SIRPB3P-201ENST00000340424 RPL35P42766 123 aaKnown RBP9.36□□□□□ -0.91
SIRPB3P-201ENST00000340424 CCL20P78556 96 aa9.36□□□□□ -0.91
SIRPB3P-201ENST00000340424 PNRC1Q12796 327 aaPredicted RBP9.36□□□□□ -0.91
SIRPB3P-201ENST00000340424 ATG101Q9BSB4 218 aa9.36□□□□□ -0.91
SIRPB3P-201ENST00000340424 TMEM242Q9NWH2 141 aa9.36□□□□□ -0.91
SIRPB3P-201ENST00000340424 GAGE12BA1L429 117 aa9.35□□□□□ -0.91
SIRPB3P-201ENST00000340424 PGPA6NDG6 321 aa9.35□□□□□ -0.91
SIRPB3P-201ENST00000340424 GAGE7O76087 117 aa9.35□□□□□ -0.91
SIRPB3P-201ENST00000340424 GAGE12FP0CL80 117 aa9.35□□□□□ -0.91
SIRPB3P-201ENST00000340424 GAGE12GP0CL81 117 aa9.35□□□□□ -0.91
SIRPB3P-201ENST00000340424 GAGE12IP0CL82 117 aa9.35□□□□□ -0.91
SIRPB3P-201ENST00000340424 TAGLN2P37802 199 aaKnown RBP9.35□□□□□ -0.91
SIRPB3P-201ENST00000340424 AKR1D1P51857 326 aa9.35□□□□□ -0.91
SIRPB3P-201ENST00000340424 TCL1AP56279 114 aa9.35□□□□□ -0.91
SIRPB3P-201ENST00000340424 Q8TAT8 98 aa9.35□□□□□ -0.91
SIRPB3P-201ENST00000340424 TVP23CQ96ET8 276 aa9.35□□□□□ -0.91
SIRPB3P-201ENST00000340424 GSN-AS1Q9NRJ2 163 aa9.35□□□□□ -0.91
SIRPB3P-201ENST00000340424 DNAH17Q9UFH2 4485 aa9.35□□□□□ -0.91
SIRPB3P-201ENST00000340424 TRGV2A0A075B6R0 118 aa9.34□□□□□ -0.91
SIRPB3P-201ENST00000340424 EIF3GO75821 320 aaKnown RBP eCLIP9.34□□□□□ -0.91
SIRPB3P-201ENST00000340424 NUDT3O95989 172 aa9.34□□□□□ -0.91
SIRPB3P-201ENST00000340424 ARL14EPLP0DKL9 152 aa9.34□□□□□ -0.91
SIRPB3P-201ENST00000340424 CCL18P55774 89 aa9.34□□□□□ -0.91
SIRPB3P-201ENST00000340424 ZNF415Q09FC8 603 aa9.34□□□□□ -0.91
SIRPB3P-201ENST00000340424 PRR9Q5T870 116 aa9.34□□□□□ -0.91
SIRPB3P-201ENST00000340424 Q6AWC8 147 aa9.34□□□□□ -0.91
SIRPB3P-201ENST00000340424 Q6ZTI0 123 aa9.34□□□□□ -0.91
SIRPB3P-201ENST00000340424 RAB24Q969Q5 203 aa9.34□□□□□ -0.91
SIRPB3P-201ENST00000340424 ACTR3CQ9C0K3 210 aaPredicted RBP9.34□□□□□ -0.91
SIRPB3P-201ENST00000340424 TMEM167BQ9NRX6 74 aa9.34□□□□□ -0.91
SIRPB3P-201ENST00000340424 TRGV1A0A0A0MS02 117 aa9.33□□□□□ -0.92
SIRPB3P-201ENST00000340424 SPINK4O60575 86 aa9.33□□□□□ -0.92
SIRPB3P-201ENST00000340424 CXorf1O96002 111 aa9.33□□□□□ -0.92
SIRPB3P-201ENST00000340424 S100A6P06703 90 aa9.33□□□□□ -0.92
SIRPB3P-201ENST00000340424 BCL2P10415 239 aa9.33□□□□□ -0.92
SIRPB3P-201ENST00000340424 SNRPEP62304 92 aaKnown RBP9.33□□□□□ -0.92
SIRPB3P-201ENST00000340424 OR5I1Q13606 314 aa9.33□□□□□ -0.92
SIRPB3P-201ENST00000340424 KLF12Q9Y4X4 402 aa9.33□□□□□ -0.92
SIRPB3P-201ENST00000340424 TRAV26-1A0A087WT03 109 aa9.32□□□□□ -0.92
SIRPB3P-201ENST00000340424 FBLL1A6NHQ2 334 aaKnown RBP9.32□□□□□ -0.92
SIRPB3P-201ENST00000340424 K7EQM0 130 aa9.32□□□□□ -0.92
SIRPB3P-201ENST00000340424 HMGB3O15347 200 aaKnown RBP9.32□□□□□ -0.92
SIRPB3P-201ENST00000340424 IFNA1P01562 189 aa9.32□□□□□ -0.92
SIRPB3P-201ENST00000340424 GCHFRP30047 84 aa9.32□□□□□ -0.92
SIRPB3P-201ENST00000340424 AKR1C3P42330 323 aa9.32□□□□□ -0.92
SIRPB3P-201ENST00000340424 FAM159AQ6UWV7 190 aa9.32□□□□□ -0.92
SIRPB3P-201ENST00000340424 Q6ZR54 194 aa9.32□□□□□ -0.92
SIRPB3P-201ENST00000340424 GOLT1AQ6ZVE7 132 aa9.32□□□□□ -0.92
SIRPB3P-201ENST00000340424 ZFP82Q8N141 532 aa9.32□□□□□ -0.92
SIRPB3P-201ENST00000340424 CYB561D1Q8N8Q1 229 aa9.32□□□□□ -0.92
SIRPB3P-201ENST00000340424 C5orf17Q8NAS9 161 aa9.32□□□□□ -0.92
SIRPB3P-201ENST00000340424 ISOC2Q96AB3 205 aa9.32□□□□□ -0.92
SIRPB3P-201ENST00000340424 TMPRSS5Q9H3S3 457 aa9.32□□□□□ -0.92
SIRPB3P-201ENST00000340424 TRGV11A0A075B6L2 103 aa9.31□□□□□ -0.92
SIRPB3P-201ENST00000340424 S100A9P06702 114 aaKnown RBP9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms