RNA–Protein interactions for RNA: ENST00000340413.6

NUP43-201, Transcript of nucleoporin 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP43, Length 3,874 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-201ENST00000340413 M0R381 172 aa5.3□□□□□ -1.56
NUP43-201ENST00000340413 TRGC1P0CF51 173 aa5.3□□□□□ -1.56
NUP43-201ENST00000340413 ZNF80P51504 273 aaPredicted RBP5.3□□□□□ -1.56
NUP43-201ENST00000340413 RPL32P62910 135 aaKnown RBP5.3□□□□□ -1.56
NUP43-201ENST00000340413 CFAP161Q6P656 301 aa5.3□□□□□ -1.56
NUP43-201ENST00000340413 GTSF1Q8WW33 167 aa5.3□□□□□ -1.56
NUP43-201ENST00000340413 IGHV3OR16-13A0A075B7E8 117 aa5.3□□□□□ -1.56
NUP43-201ENST00000340413 IGHV3-74A0A0B4J1X5 117 aa5.3□□□□□ -1.56
NUP43-201ENST00000340413 SMIM9A6NGZ8 99 aa5.3□□□□□ -1.56
NUP43-201ENST00000340413 ZNF688P0C7X2 276 aa5.3□□□□□ -1.56
NUP43-201ENST00000340413 NBPF19A0A087WUL8 3843 aa5.3□□□□□ -1.56
NUP43-201ENST00000340413 K7EMI3 77 aa5.3□□□□□ -1.56
NUP43-201ENST00000340413 DEFB131AP59861 70 aa5.3□□□□□ -1.56
NUP43-201ENST00000340413 ZFP82Q8N141 532 aa5.3□□□□□ -1.56
NUP43-201ENST00000340413 IGHV1OR15-1A0A075B7D0 117 aa5.29□□□□□ -1.56
NUP43-201ENST00000340413 IGKV3D-20A0A0C4DH25 116 aa5.29□□□□□ -1.56
NUP43-201ENST00000340413 LINC01546A6NGU7 62 aa5.29□□□□□ -1.56
NUP43-201ENST00000340413 GTSCR1Q86UQ5 136 aa5.29□□□□□ -1.56
NUP43-201ENST00000340413 SYT8Q8NBV8 401 aa5.29□□□□□ -1.56
NUP43-201ENST00000340413 IL17DQ8TAD2 202 aa5.29□□□□□ -1.56
NUP43-201ENST00000340413 TRAPPC1Q9Y5R8 145 aa5.29□□□□□ -1.56
NUP43-201ENST00000340413 CD33P20138 364 aa5.29□□□□□ -1.56
NUP43-201ENST00000340413 RAB4AP20338 218 aa5.29□□□□□ -1.56
NUP43-201ENST00000340413 EDN2P20800 178 aa5.29□□□□□ -1.56
NUP43-201ENST00000340413 RPS10P46783 165 aaKnown RBP5.29□□□□□ -1.56
NUP43-201ENST00000340413 PRR27Q6MZM9 219 aa5.29□□□□□ -1.56
NUP43-201ENST00000340413 FAM159AQ6UWV7 190 aa5.29□□□□□ -1.56
NUP43-201ENST00000340413 SMIM15Q7Z3B0 74 aa5.29□□□□□ -1.56
NUP43-201ENST00000340413 ZNF575Q86XF7 245 aa5.29□□□□□ -1.56
NUP43-201ENST00000340413 STHQ8IWL8 128 aa5.29□□□□□ -1.56
NUP43-201ENST00000340413 MRAP2Q96G30 205 aa5.29□□□□□ -1.56
NUP43-201ENST00000340413 SGK494Q96LW2 274 aa5.29□□□□□ -1.56
NUP43-201ENST00000340413 A0A1W2PRX2 142 aa5.29□□□□□ -1.56
NUP43-201ENST00000340413 LINC01549A6NIU2 74 aa5.29□□□□□ -1.56
NUP43-201ENST00000340413 Q8TAT8 98 aa5.29□□□□□ -1.56
NUP43-201ENST00000340413 TEX15Q9BXT5 2789 aa5.29□□□□□ -1.56
NUP43-201ENST00000340413 PMCHP20382 165 aa5.28□□□□□ -1.56
NUP43-201ENST00000340413 GFI1BQ5VTD9 330 aa5.28□□□□□ -1.56
NUP43-201ENST00000340413 C18orf15Q96N68 181 aa5.28□□□□□ -1.56
NUP43-201ENST00000340413 TCAPO15273 167 aa5.28□□□□□ -1.56
NUP43-201ENST00000340413 ZNF415Q09FC8 603 aa5.28□□□□□ -1.56
NUP43-201ENST00000340413 IGFL4Q6B9Z1 124 aa5.28□□□□□ -1.56
NUP43-201ENST00000340413 MRPL18Q9H0U6 180 aaKnown RBP5.28□□□□□ -1.56
NUP43-201ENST00000340413 GOLT1BQ9Y3E0 138 aa5.28□□□□□ -1.56
NUP43-201ENST00000340413 CRXO43186 299 aaPredicted RBP5.28□□□□□ -1.56
NUP43-201ENST00000340413 APCSP02743 223 aa5.28□□□□□ -1.56
NUP43-201ENST00000340413 ORM1P02763 201 aa5.28□□□□□ -1.56
NUP43-201ENST00000340413 PRR9Q5T870 116 aa5.28□□□□□ -1.56
NUP43-201ENST00000340413 IGHV3-16A0A0C4DH30 117 aa5.27□□□□□ -1.57
NUP43-201ENST00000340413 LGALS9BQ3B8N2 356 aa5.27□□□□□ -1.57
NUP43-201ENST00000340413 KPRPQ5T749 579 aaPredicted RBP5.27□□□□□ -1.57
NUP43-201ENST00000340413 PRIMA1Q86XR5 153 aa5.27□□□□□ -1.57
NUP43-201ENST00000340413 AKR1D1P51857 326 aa5.27□□□□□ -1.57
NUP43-201ENST00000340413 APOC4P55056 127 aa5.27□□□□□ -1.57
NUP43-201ENST00000340413 LYZL1Q6UWQ5 148 aa5.27□□□□□ -1.57
NUP43-201ENST00000340413 TP53TG1Q9Y2A0 90 aa5.27□□□□□ -1.57
NUP43-201ENST00000340413 LOC102724200A0A096LPH7 203 aaPredicted RBP5.27□□□□□ -1.57
NUP43-201ENST00000340413 TEX48A0A1B0GUV7 120 aa5.27□□□□□ -1.57
NUP43-201ENST00000340413 C5orf52A6NGY3 159 aa5.27□□□□□ -1.57
NUP43-201ENST00000340413 SNURFLB1AK76 121 aa5.27□□□□□ -1.57
NUP43-201ENST00000340413 RNASE4P34096 147 aaKnown RBP5.27□□□□□ -1.57
NUP43-201ENST00000340413 FAM104BQ5XKR9 115 aa5.27□□□□□ -1.57
NUP43-201ENST00000340413 CHCHD1Q96BP2 118 aaKnown RBP5.27□□□□□ -1.57
NUP43-201ENST00000340413 AURKAIP1Q9NWT8 199 aaPredicted RBP5.27□□□□□ -1.57
NUP43-201ENST00000340413 ZFP2Q6ZN57 461 aa5.26□□□□□ -1.57
NUP43-201ENST00000340413 WFDC3Q8IUB2 231 aa5.26□□□□□ -1.57
NUP43-201ENST00000340413 DUX3Q96PT4 197 aa5.26□□□□□ -1.57
NUP43-201ENST00000340413 C11orf21Q9P2W6 132 aa5.26□□□□□ -1.57
NUP43-201ENST00000340413 URGCP-MRPS24S4R325 110 aa5.26□□□□□ -1.57
NUP43-201ENST00000340413 RBMY1BA6NDE4 496 aaKnown RBP5.26□□□□□ -1.57
NUP43-201ENST00000340413 RBMY1EA6NEQ0 496 aaKnown RBP5.26□□□□□ -1.57
NUP43-201ENST00000340413 RHODO00212 210 aa5.26□□□□□ -1.57
NUP43-201ENST00000340413 RBMY1DP0C7P1 496 aaKnown RBP5.26□□□□□ -1.57
NUP43-201ENST00000340413 HOXA5P20719 270 aa5.26□□□□□ -1.57
NUP43-201ENST00000340413 GDF5OSQ5U4N7 250 aa5.26□□□□□ -1.57
NUP43-201ENST00000340413 C16orf74Q96GX8 76 aa5.26□□□□□ -1.57
NUP43-201ENST00000340413 PGLYRP4Q96LB8 373 aa5.26□□□□□ -1.57
NUP43-201ENST00000340413 AP1S3Q96PC3 154 aa5.26□□□□□ -1.57
NUP43-201ENST00000340413 HIST1H2BKO60814 126 aa5.26□□□□□ -1.57
NUP43-201ENST00000340413 TRGC2P03986 189 aa5.26□□□□□ -1.57
NUP43-201ENST00000340413 HIST1H2BJP06899 126 aa5.26□□□□□ -1.57
NUP43-201ENST00000340413 SNRPCP09234 159 aaKnown RBP5.26□□□□□ -1.57
NUP43-201ENST00000340413 HIST1H2BOP23527 126 aa5.26□□□□□ -1.57
NUP43-201ENST00000340413 HIST1H2BBP33778 126 aa5.26□□□□□ -1.57
NUP43-201ENST00000340413 TCL1AP56279 114 aa5.26□□□□□ -1.57
NUP43-201ENST00000340413 HIST1H2BDP58876 126 aa5.26□□□□□ -1.57
NUP43-201ENST00000340413 HIST1H2BCP62807 126 aa5.26□□□□□ -1.57
NUP43-201ENST00000340413 DAZ2Q13117 558 aaKnown RBP5.26□□□□□ -1.57
NUP43-201ENST00000340413 HIST2H2BEQ16778 126 aa5.26□□□□□ -1.57
NUP43-201ENST00000340413 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.26□□□□□ -1.57
NUP43-201ENST00000340413 ZNF705AQ6ZN79 300 aaPredicted RBP5.26□□□□□ -1.57
NUP43-201ENST00000340413 HIST1H2BHQ93079 126 aa5.26□□□□□ -1.57
NUP43-201ENST00000340413 HIST1H2BNQ99877 126 aa5.26□□□□□ -1.57
NUP43-201ENST00000340413 HIST1H2BMQ99879 126 aa5.26□□□□□ -1.57
NUP43-201ENST00000340413 DPH3P1Q9H4G8 78 aa5.26□□□□□ -1.57
NUP43-201ENST00000340413 ATRQ13535 2644 aa5.25□□□□□ -1.57
NUP43-201ENST00000340413 OVOL2Q9BRP0 275 aa5.25□□□□□ -1.57
NUP43-201ENST00000340413 A8MWV9 139 aa5.25□□□□□ -1.57
NUP43-201ENST00000340413 ZNF705DP0CH99 300 aaPredicted RBP5.25□□□□□ -1.57
NUP43-201ENST00000340413 ZNF705BP0CI00 300 aaPredicted RBP5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms