RNA–Protein interactions for RNA: ENST00000339436.11

SRSF3-201, Transcript of serine and arginine rich splicing factor 3, humanhuman

TSL 2

Gene SRSF3, Length 1,518 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF3-201ENST00000339436 ZNF415Q09FC8 603 aa9.12□□□□□ -0.95
SRSF3-201ENST00000339436 TEX261Q6UWH6 196 aa9.12□□□□□ -0.95
SRSF3-201ENST00000339436 TMEM183AQ8IXX5 376 aa9.12□□□□□ -0.95
SRSF3-201ENST00000339436 LINC00612Q8N6U2 182 aa9.12□□□□□ -0.95
SRSF3-201ENST00000339436 ZC2HC1AQ96GY0 325 aa9.12□□□□□ -0.95
SRSF3-201ENST00000339436 VAX2Q9UIW0 290 aa9.12□□□□□ -0.95
SRSF3-201ENST00000339436 VPS13DQ5THJ4 4388 aa9.12□□□□□ -0.95
SRSF3-201ENST00000339436 DEFB131BA0A096LNP1 70 aa9.11□□□□□ -0.95
SRSF3-201ENST00000339436 PDE6DO43924 150 aa9.11□□□□□ -0.95
SRSF3-201ENST00000339436 DEFB130BP0DP73 79 aa9.11□□□□□ -0.95
SRSF3-201ENST00000339436 DEFB130AP0DP74 79 aa9.11□□□□□ -0.95
SRSF3-201ENST00000339436 DERL1Q9BUN8 251 aa9.11□□□□□ -0.95
SRSF3-201ENST00000339436 C11orf21Q9P2W6 132 aa9.11□□□□□ -0.95
SRSF3-201ENST00000339436 RYR3Q15413 4870 aa9.11□□□□□ -0.95
SRSF3-201ENST00000339436 RYR2Q92736 4967 aa9.11□□□□□ -0.95
SRSF3-201ENST00000339436 TYMSP04818 313 aa9.1□□□□□ -0.95
SRSF3-201ENST00000339436 RPL35P42766 123 aaKnown RBP9.1□□□□□ -0.95
SRSF3-201ENST00000339436 Q6ZTI0 123 aa9.1□□□□□ -0.95
SRSF3-201ENST00000339436 KCNS1Q96KK3 526 aa9.1□□□□□ -0.95
SRSF3-201ENST00000339436 SDF2L1Q9HCN8 221 aa9.1□□□□□ -0.95
SRSF3-201ENST00000339436 NHLRC2Q8NBF2 726 aa9.1□□□□□ -0.95
SRSF3-201ENST00000339436 MDFICQ9P1T7 246 aa9.1□□□□□ -0.95
SRSF3-201ENST00000339436 IGHV3-16A0A0C4DH30 117 aa9.09□□□□□ -0.95
SRSF3-201ENST00000339436 GAGE12BA1L429 117 aa9.09□□□□□ -0.95
SRSF3-201ENST00000339436 SPINK4O60575 86 aa9.09□□□□□ -0.95
SRSF3-201ENST00000339436 GAGE7O76087 117 aa9.09□□□□□ -0.95
SRSF3-201ENST00000339436 GAGE12FP0CL80 117 aa9.09□□□□□ -0.95
SRSF3-201ENST00000339436 GAGE12GP0CL81 117 aa9.09□□□□□ -0.95
SRSF3-201ENST00000339436 GAGE12IP0CL82 117 aa9.09□□□□□ -0.95
SRSF3-201ENST00000339436 HTN3P15516 51 aa9.09□□□□□ -0.95
SRSF3-201ENST00000339436 CRIP1P50238 77 aa9.09□□□□□ -0.95
SRSF3-201ENST00000339436 FAM162BQ5T6X4 162 aa9.09□□□□□ -0.95
SRSF3-201ENST00000339436 MLST8Q9BVC4 326 aa9.09□□□□□ -0.95
SRSF3-201ENST00000339436 TRGV1A0A0A0MS02 117 aa9.08□□□□□ -0.96
SRSF3-201ENST00000339436 FABP5P3A8MUU1 101 aa9.08□□□□□ -0.96
SRSF3-201ENST00000339436 GNRH2O43555 120 aa9.08□□□□□ -0.96
SRSF3-201ENST00000339436 SH2D1AO60880 128 aa9.08□□□□□ -0.96
SRSF3-201ENST00000339436 ATP5G1P05496 136 aa9.08□□□□□ -0.96
SRSF3-201ENST00000339436 ZNF674Q2M3X9 581 aa9.08□□□□□ -0.96
SRSF3-201ENST00000339436 LGALS9BQ3B8N2 356 aa9.08□□□□□ -0.96
SRSF3-201ENST00000339436 CENPWQ5EE01 88 aa9.08□□□□□ -0.96
SRSF3-201ENST00000339436 ZNF506Q5JVG8 444 aa9.08□□□□□ -0.96
SRSF3-201ENST00000339436 BAGE2Q86Y30 109 aa9.08□□□□□ -0.96
SRSF3-201ENST00000339436 HYDINQ4G0P3 5121 aa9.07□□□□□ -0.96
SRSF3-201ENST00000339436 IGHV4-4A0A075B6R2 117 aa9.07□□□□□ -0.96
SRSF3-201ENST00000339436 IGKV3D-20A0A0C4DH25 116 aa9.07□□□□□ -0.96
SRSF3-201ENST00000339436 RBFOX3A6NFN3 312 aa9.07□□□□□ -0.96
SRSF3-201ENST00000339436 IGLL5B9A064 214 aa9.07□□□□□ -0.96
SRSF3-201ENST00000339436 TCTAP57738 103 aa9.07□□□□□ -0.96
SRSF3-201ENST00000339436 TOR2AQ5JU69 321 aa9.07□□□□□ -0.96
SRSF3-201ENST00000339436 C18orf15Q96N68 181 aa9.07□□□□□ -0.96
SRSF3-201ENST00000339436 SPXQ9BT56 116 aa9.07□□□□□ -0.96
SRSF3-201ENST00000339436 MED9Q9NWA0 146 aa9.07□□□□□ -0.96
SRSF3-201ENST00000339436 MRPL16Q9NX20 251 aaKnown RBP9.07□□□□□ -0.96
SRSF3-201ENST00000339436 TRBV20OR9-2A0A075B6H5 130 aa9.06□□□□□ -0.96
SRSF3-201ENST00000339436 PCNPQ8WW12 178 aaKnown RBP9.06□□□□□ -0.96
SRSF3-201ENST00000339436 FAM210AQ96ND0 272 aa9.06□□□□□ -0.96
SRSF3-201ENST00000339436 TRGV2A0A075B6R0 118 aa9.05□□□□□ -0.96
SRSF3-201ENST00000339436 LCE6AA0A183 80 aa9.05□□□□□ -0.96
SRSF3-201ENST00000339436 TMEM250H0YL14 139 aa9.05□□□□□ -0.96
SRSF3-201ENST00000339436 M0R036 132 aa9.05□□□□□ -0.96
SRSF3-201ENST00000339436 GNG4P50150 75 aa9.05□□□□□ -0.96
SRSF3-201ENST00000339436 LINC01559Q495D7 138 aa9.05□□□□□ -0.96
SRSF3-201ENST00000339436 SMIM12Q96EX1 92 aa9.05□□□□□ -0.96
SRSF3-201ENST00000339436 FAM210BQ96KR6 192 aa9.05□□□□□ -0.96
SRSF3-201ENST00000339436 C9orf85Q96MD7 179 aa9.05□□□□□ -0.96
SRSF3-201ENST00000339436 RAB19A4D1S5 217 aa9.05□□□□□ -0.96
SRSF3-201ENST00000339436 B4DEV8 164 aa9.05□□□□□ -0.96
SRSF3-201ENST00000339436 KRBOX1C9JBD0 128 aa9.05□□□□□ -0.96
SRSF3-201ENST00000339436 M0R2P5 195 aa9.05□□□□□ -0.96
SRSF3-201ENST00000339436 IGLV2-8P01709 118 aa9.05□□□□□ -0.96
SRSF3-201ENST00000339436 ORM1P02763 201 aa9.05□□□□□ -0.96
SRSF3-201ENST00000339436 RNASE3P12724 160 aaKnown RBP9.05□□□□□ -0.96
SRSF3-201ENST00000339436 TMEM88Q6PEY1 159 aa9.05□□□□□ -0.96
SRSF3-201ENST00000339436 RASL10AQ92737 203 aa9.05□□□□□ -0.96
SRSF3-201ENST00000339436 NDUFAF3Q9BU61 184 aa9.05□□□□□ -0.96
SRSF3-201ENST00000339436 APLNQ9ULZ1 77 aa9.05□□□□□ -0.96
SRSF3-201ENST00000339436 KMT2AQ03164 3969 aa9.05□□□□□ -0.96
SRSF3-201ENST00000339436 DNAH6Q9C0G6 4158 aa9.04□□□□□ -0.96
SRSF3-201ENST00000339436 F5H768 121 aa9.04□□□□□ -0.96
SRSF3-201ENST00000339436 NDUFS6O75380 124 aaKnown RBP9.04□□□□□ -0.96
SRSF3-201ENST00000339436 ASIPP42127 132 aa9.04□□□□□ -0.96
SRSF3-201ENST00000339436 PRR27Q6MZM9 219 aa9.04□□□□□ -0.96
SRSF3-201ENST00000339436 LINC00476Q8WZB0 136 aa9.04□□□□□ -0.96
SRSF3-201ENST00000339436 EIF5A2Q9GZV4 153 aaKnown RBP9.04□□□□□ -0.96
SRSF3-201ENST00000339436 PGPEP1LA6NFU8 196 aa9.03□□□□□ -0.96
SRSF3-201ENST00000339436 C9JCJ5 164 aa9.03□□□□□ -0.96
SRSF3-201ENST00000339436 HOXA5P20719 270 aa9.03□□□□□ -0.96
SRSF3-201ENST00000339436 DNLZQ5SXM8 178 aa9.03□□□□□ -0.96
SRSF3-201ENST00000339436 PARLQ9H300 379 aa9.03□□□□□ -0.96
SRSF3-201ENST00000339436 IL36BQ9NZH7 164 aa9.03□□□□□ -0.96
SRSF3-201ENST00000339436 H3BVH4 76 aa9.02□□□□□ -0.97
SRSF3-201ENST00000339436 MGST1P10620 155 aaKnown RBP9.02□□□□□ -0.97
SRSF3-201ENST00000339436 S100A4P26447 101 aaKnown RBP9.02□□□□□ -0.97
SRSF3-201ENST00000339436 ZNF575Q86XF7 245 aa9.02□□□□□ -0.97
SRSF3-201ENST00000339436 TMSB15BA0A087X1C1 80 aa9.01□□□□□ -0.97
SRSF3-201ENST00000339436 IGHV3-53P01767 116 aa9.01□□□□□ -0.97
SRSF3-201ENST00000339436 RPL19P84098 196 aaKnown RBP9.01□□□□□ -0.97
SRSF3-201ENST00000339436 OR5I1Q13606 314 aa9.01□□□□□ -0.97
SRSF3-201ENST00000339436 ZNF876PQ49A33 203 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 156.3 ms