RNA–Protein interactions for RNA: ENST00000339430.9

LITAF-201, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-201ENST00000339430 TCF21O43680 179 aa12.43□□□□□ -0.42
LITAF-201ENST00000339430 C20orf173Q96LM9 149 aa12.43□□□□□ -0.42
LITAF-201ENST00000339430 MS4A6AQ9H2W1 248 aa12.43□□□□□ -0.42
LITAF-201ENST00000339430 DEFB1P60022 68 aa12.43□□□□□ -0.42
LITAF-201ENST00000339430 Q6ZS46 218 aa12.43□□□□□ -0.42
LITAF-201ENST00000339430 ERASQ7Z444 233 aa12.43□□□□□ -0.42
LITAF-201ENST00000339430 C18orf15Q96N68 181 aa12.43□□□□□ -0.42
LITAF-201ENST00000339430 MAP1LC3AQ9H492 121 aa12.43□□□□□ -0.42
LITAF-201ENST00000339430 HIST1H1AQ02539 215 aaPredicted RBP12.42□□□□□ -0.42
LITAF-201ENST00000339430 GLMPQ8WWB7 406 aa12.42□□□□□ -0.42
LITAF-201ENST00000339430 KLK15Q9H2R5 256 aa12.42□□□□□ -0.42
LITAF-201ENST00000339430 FSHBP01225 129 aa12.42□□□□□ -0.42
LITAF-201ENST00000339430 IGF1P05019 195 aa12.42□□□□□ -0.42
LITAF-201ENST00000339430 BLCAPP62952 87 aa12.42□□□□□ -0.42
LITAF-201ENST00000339430 PRR9Q5T870 116 aa12.42□□□□□ -0.42
LITAF-201ENST00000339430 ZNF738Q8NE65 137 aa12.42□□□□□ -0.42
LITAF-201ENST00000339430 COX11Q9Y6N1 276 aa12.42□□□□□ -0.42
LITAF-201ENST00000339430 AKAP9Q99996 3911 aa12.42□□□□□ -0.42
LITAF-201ENST00000339430 MXRA5Q9NR99 2828 aa12.41□□□□□ -0.42
LITAF-201ENST00000339430 IGKV3-7A0A075B6H7 116 aa12.41□□□□□ -0.42
LITAF-201ENST00000339430 TNFRSF6BO95407 300 aa12.41□□□□□ -0.42
LITAF-201ENST00000339430 DEFB112Q30KQ8 113 aa12.41□□□□□ -0.42
LITAF-201ENST00000339430 ANKRD39Q53RE8 183 aa12.41□□□□□ -0.42
LITAF-201ENST00000339430 C9orf47Q6ZRZ4 202 aa12.41□□□□□ -0.42
LITAF-201ENST00000339430 IFI27L1Q96BM0 104 aa12.41□□□□□ -0.42
LITAF-201ENST00000339430 PF4V1P10720 104 aa12.41□□□□□ -0.42
LITAF-201ENST00000339430 MRPL53Q96EL3 112 aaKnown RBP12.41□□□□□ -0.42
LITAF-201ENST00000339430 IGHV7-4-1A0A0J9YVY3 117 aa12.4□□□□□ -0.42
LITAF-201ENST00000339430 CRIP2P52943 208 aaPredicted RBP12.4□□□□□ -0.42
LITAF-201ENST00000339430 RPL11P62913 178 aaKnown RBP12.4□□□□□ -0.42
LITAF-201ENST00000339430 BVES-AS1Q5T3Y7 98 aa12.4□□□□□ -0.42
LITAF-201ENST00000339430 UFC1Q9Y3C8 167 aa12.4□□□□□ -0.42
LITAF-201ENST00000339430 TRAV26-2A0A0B4J265 109 aa12.4□□□□□ -0.43
LITAF-201ENST00000339430 COX8AP10176 69 aa12.4□□□□□ -0.43
LITAF-201ENST00000339430 GPHB5Q86YW7 130 aa12.4□□□□□ -0.43
LITAF-201ENST00000339430 ORAOV1Q8WV07 137 aa12.4□□□□□ -0.43
LITAF-201ENST00000339430 FLNBO75369 2602 aaKnown RBP12.39□□□□□ -0.43
LITAF-201ENST00000339430 LEPP41159 167 aa12.39□□□□□ -0.43
LITAF-201ENST00000339430 LGALS9BQ3B8N2 356 aa12.39□□□□□ -0.43
LITAF-201ENST00000339430 LGALS9CQ6DKI2 356 aa12.39□□□□□ -0.43
LITAF-201ENST00000339430 SONP18583 2426 aaKnown RBP12.39□□□□□ -0.43
LITAF-201ENST00000339430 SPRY2O43597 315 aa12.38□□□□□ -0.43
LITAF-201ENST00000339430 PPBPP02775 128 aa12.38□□□□□ -0.43
LITAF-201ENST00000339430 H3BVH4 76 aa12.38□□□□□ -0.43
LITAF-201ENST00000339430 IGHG2P01859 326 aa12.38□□□□□ -0.43
LITAF-201ENST00000339430 KRTAP1-1Q07627 177 aa12.38□□□□□ -0.43
LITAF-201ENST00000339430 C9orf139Q6ZV77 190 aa12.38□□□□□ -0.43
LITAF-201ENST00000339430 DKK2Q9UBU2 259 aa12.38□□□□□ -0.43
LITAF-201ENST00000339430 A6NDX4 124 aa12.37□□□□□ -0.43
LITAF-201ENST00000339430 NDUFA4O00483 81 aa12.37□□□□□ -0.43
LITAF-201ENST00000339430 SPANXN1Q5VSR9 72 aa12.37□□□□□ -0.43
LITAF-201ENST00000339430 C2orf91Q6ZV80 131 aa12.37□□□□□ -0.43
LITAF-201ENST00000339430 OTOGQ6ZRI0 2925 aa12.37□□□□□ -0.43
LITAF-201ENST00000339430 CCL25O15444 150 aa12.37□□□□□ -0.43
LITAF-201ENST00000339430 IGHV4-59P01825 116 aa12.37□□□□□ -0.43
LITAF-201ENST00000339430 PTTG1IPP53801 180 aa12.37□□□□□ -0.43
LITAF-201ENST00000339430 OR4X2Q8NGF9 303 aa12.37□□□□□ -0.43
LITAF-201ENST00000339430 F6UB75 175 aa12.36□□□□□ -0.43
LITAF-201ENST00000339430 ATP6V0BQ99437 205 aa12.36□□□□□ -0.43
LITAF-201ENST00000339430 CD5LO43866 347 aa12.36□□□□□ -0.43
LITAF-201ENST00000339430 C12orf54Q6X4T0 127 aa12.36□□□□□ -0.43
LITAF-201ENST00000339430 SMIM15Q7Z3B0 74 aa12.36□□□□□ -0.43
LITAF-201ENST00000339430 SRD5A1P18405 259 aa12.35□□□□□ -0.43
LITAF-201ENST00000339430 TMEM95Q3KNT9 176 aa12.35□□□□□ -0.43
LITAF-201ENST00000339430 TM4SF20Q53R12 229 aa12.35□□□□□ -0.43
LITAF-201ENST00000339430 OR2K2Q8NGT1 345 aa12.35□□□□□ -0.43
LITAF-201ENST00000339430 NPFFR1Q9GZQ6 430 aa12.35□□□□□ -0.43
LITAF-201ENST00000339430 NXT2Q9NPJ8 142 aaKnown RBP12.35□□□□□ -0.43
LITAF-201ENST00000339430 YAE1D1Q9NRH1 226 aa12.35□□□□□ -0.43
LITAF-201ENST00000339430 EDN2P20800 178 aa12.35□□□□□ -0.43
LITAF-201ENST00000339430 OR10J6PQ8NGY7 276 aa12.35□□□□□ -0.43
LITAF-201ENST00000339430 TMEM158Q8WZ71 300 aa12.35□□□□□ -0.43
LITAF-201ENST00000339430 CBY3A6NI87 242 aa12.34□□□□□ -0.43
LITAF-201ENST00000339430 TAX1BP3O14907 124 aa12.34□□□□□ -0.43
LITAF-201ENST00000339430 FGF6P10767 208 aa12.34□□□□□ -0.43
LITAF-201ENST00000339430 FCER1GP30273 86 aa12.34□□□□□ -0.43
LITAF-201ENST00000339430 USMG5Q96IX5 58 aa12.34□□□□□ -0.43
LITAF-201ENST00000339430 SOCS3O14543 225 aa12.34□□□□□ -0.43
LITAF-201ENST00000339430 KIR3DS1Q14943 382 aa12.34□□□□□ -0.43
LITAF-201ENST00000339430 NMUP48645 174 aa12.33□□□□□ -0.44
LITAF-201ENST00000339430 Q6YL49 198 aa12.33□□□□□ -0.44
LITAF-201ENST00000339430 ZFAND2AQ8N6M9 145 aa12.33□□□□□ -0.44
LITAF-201ENST00000339430 PPP1R14DQ9NXH3 145 aa12.33□□□□□ -0.44
LITAF-201ENST00000339430 M0R381 172 aa12.33□□□□□ -0.44
LITAF-201ENST00000339430 PRSS1P07477 247 aa12.33□□□□□ -0.44
LITAF-201ENST00000339430 UBE2V1Q13404 147 aa12.33□□□□□ -0.44
LITAF-201ENST00000339430 VAMP3Q15836 100 aa12.33□□□□□ -0.44
LITAF-201ENST00000339430 DEFB125Q8N687 156 aa12.33□□□□□ -0.44
LITAF-201ENST00000339430 Q8N8P6 123 aa12.33□□□□□ -0.44
LITAF-201ENST00000339430 NRACQ8N912 160 aa12.33□□□□□ -0.44
LITAF-201ENST00000339430 SMR3AQ99954 134 aa12.33□□□□□ -0.44
LITAF-201ENST00000339430 RHPN1-AS1Q9BWJ2 59 aa12.33□□□□□ -0.44
LITAF-201ENST00000339430 IGLV2-18A0A075B6J9 118 aa12.32□□□□□ -0.44
LITAF-201ENST00000339430 LINC01546A6NGU7 62 aa12.32□□□□□ -0.44
LITAF-201ENST00000339430 LINC00477Q96M19 166 aa12.32□□□□□ -0.44
LITAF-201ENST00000339430 RNASE4P34096 147 aaKnown RBP12.32□□□□□ -0.44
LITAF-201ENST00000339430 PCP2Q8IVA1 136 aa12.32□□□□□ -0.44
LITAF-201ENST00000339430 TEX29Q8N6K0 151 aa12.32□□□□□ -0.44
LITAF-201ENST00000339430 OR1N2Q8NGR9 330 aa12.32□□□□□ -0.44
LITAF-201ENST00000339430 H3BUA1 57 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms