RNA–Protein interactions for RNA: ENST00000334389.5

LINC00643-201, long intergenic non-protein coding RNA 643, humanhuman

TSL 2 BASIC

Gene LINC00643, Length 3,247 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-201ENST00000334389 PLEKHJ1Q9NW61 149 aa0.91□□□□□ -2.26
LINC00643-201ENST00000334389 CRIPTQ9P021 101 aa0.91□□□□□ -2.26
LINC00643-201ENST00000334389 NAT8Q9UHE5 227 aa0.91□□□□□ -2.26
LINC00643-201ENST00000334389 AK3Q9UIJ7 227 aa0.91□□□□□ -2.26
LINC00643-201ENST00000334389 GNG8Q9UK08 70 aa0.91□□□□□ -2.26
LINC00643-201ENST00000334389 PXMP4Q9Y6I8 212 aa0.91□□□□□ -2.26
LINC00643-201ENST00000334389 A0A0J9YX75 114 aa0.9□□□□□ -2.27
LINC00643-201ENST00000334389 PMS2P5A8MQ11 134 aa0.9□□□□□ -2.27
LINC00643-201ENST00000334389 KRTAP9-6A8MVA2 160 aa0.9□□□□□ -2.27
LINC00643-201ENST00000334389 KLLNB2CW77 178 aa0.9□□□□□ -2.27
LINC00643-201ENST00000334389 MPPED1O15442 326 aa0.9□□□□□ -2.27
LINC00643-201ENST00000334389 HBE1P02100 147 aa0.9□□□□□ -2.27
LINC00643-201ENST00000334389 CRYBA4P53673 196 aa0.9□□□□□ -2.27
LINC00643-201ENST00000334389 NDUFA6P56556 154 aa0.9□□□□□ -2.27
LINC00643-201ENST00000334389 PIGPP57054 158 aa0.9□□□□□ -2.27
LINC00643-201ENST00000334389 NANOS2P60321 138 aaKnown RBP0.9□□□□□ -2.27
LINC00643-201ENST00000334389 UBE2G2P60604 165 aa0.9□□□□□ -2.27
LINC00643-201ENST00000334389 RAB5BP61020 215 aa0.9□□□□□ -2.27
LINC00643-201ENST00000334389 CYCSP99999 105 aaKnown RBP0.9□□□□□ -2.27
LINC00643-201ENST00000334389 PNRC1Q12796 327 aaPredicted RBP0.9□□□□□ -2.27
LINC00643-201ENST00000334389 UBE2V1Q13404 147 aa0.9□□□□□ -2.27
LINC00643-201ENST00000334389 FAM74A3Q4VXF1 159 aa0.9□□□□□ -2.27
LINC00643-201ENST00000334389 ZNF506Q5JVG8 444 aa0.9□□□□□ -2.27
LINC00643-201ENST00000334389 AADACL3Q5VUY0 350 aa0.9□□□□□ -2.27
LINC00643-201ENST00000334389 Q6AWC8 147 aa0.9□□□□□ -2.27
LINC00643-201ENST00000334389 FAM159AQ6UWV7 190 aa0.9□□□□□ -2.27
LINC00643-201ENST00000334389 CLEC19AQ6UXS0 136 aa0.9□□□□□ -2.27
LINC00643-201ENST00000334389 FAM19A5Q7Z5A7 132 aaPredicted RBP0.9□□□□□ -2.27
LINC00643-201ENST00000334389 C12orf45Q8N5I9 185 aaPredicted RBP0.9□□□□□ -2.27
LINC00643-201ENST00000334389 FER1L6-AS1Q8NA97 138 aa0.9□□□□□ -2.27
LINC00643-201ENST00000334389 C11orf72Q8NBR9 251 aa0.9□□□□□ -2.27
LINC00643-201ENST00000334389 OR5C1Q8NGR4 320 aa0.9□□□□□ -2.27
LINC00643-201ENST00000334389 LGALS14Q8TCE9 139 aa0.9□□□□□ -2.27
LINC00643-201ENST00000334389 TCTEX1D2Q8WW35 142 aa0.9□□□□□ -2.27
LINC00643-201ENST00000334389 PIGCQ92535 297 aa0.9□□□□□ -2.27
LINC00643-201ENST00000334389 NPIPB3Q92617 1050 aa0.9□□□□□ -2.27
LINC00643-201ENST00000334389 C5orf30Q96GV9 206 aa0.9□□□□□ -2.27
LINC00643-201ENST00000334389 PMCHL2Q9BQD1 86 aa0.9□□□□□ -2.27
LINC00643-201ENST00000334389 ZNF471Q9BX82 626 aaPredicted RBP0.9□□□□□ -2.27
LINC00643-201ENST00000334389 QTRT1Q9BXR0 403 aaKnown RBP0.9□□□□□ -2.27
LINC00643-201ENST00000334389 SNHG12Q9BXW3 62 aa0.9□□□□□ -2.27
LINC00643-201ENST00000334389 SLC25A31Q9H0C2 315 aa0.9□□□□□ -2.27
LINC00643-201ENST00000334389 VCX2Q9H322 139 aa0.9□□□□□ -2.27
LINC00643-201ENST00000334389 NAA60Q9H7X0 242 aa0.9□□□□□ -2.27
LINC00643-201ENST00000334389 TAF9BQ9HBM6 251 aa0.9□□□□□ -2.27
LINC00643-201ENST00000334389 KLF12Q9Y4X4 402 aa0.9□□□□□ -2.27
LINC00643-201ENST00000334389 SOX21Q9Y651 276 aaPredicted RBP0.9□□□□□ -2.27
LINC00643-201ENST00000334389 IGHV3OR15-7A0A075B7D8 119 aa0.9□□□□□ -2.27
LINC00643-201ENST00000334389 TRAV26-2A0A0B4J265 109 aa0.9□□□□□ -2.27
LINC00643-201ENST00000334389 LINC01549A6NIU2 74 aa0.9□□□□□ -2.27
LINC00643-201ENST00000334389 FAM74A7A6NL05 159 aa0.9□□□□□ -2.27
LINC00643-201ENST00000334389 DISC1C4P0D8 188 aa0.9□□□□□ -2.27
LINC00643-201ENST00000334389 F5H5K5 113 aa0.9□□□□□ -2.27
LINC00643-201ENST00000334389 SIRPB1O00241 398 aa0.9□□□□□ -2.27
LINC00643-201ENST00000334389 TCAPO15273 167 aa0.9□□□□□ -2.27
LINC00643-201ENST00000334389 PPYP01298 95 aa0.9□□□□□ -2.27
LINC00643-201ENST00000334389 TRGV3P03979 118 aa0.9□□□□□ -2.27
LINC00643-201ENST00000334389 RLN2P04090 185 aa0.9□□□□□ -2.27
LINC00643-201ENST00000334389 CHTF8P0CG12 524 aa0.9□□□□□ -2.27
LINC00643-201ENST00000334389 STAG3L3P0CL85 134 aa0.9□□□□□ -2.27
LINC00643-201ENST00000334389 AKAIN1P0CW23 69 aa0.9□□□□□ -2.27
LINC00643-201ENST00000334389 EVI2AP22794 236 aa0.9□□□□□ -2.27
LINC00643-201ENST00000334389 HCCSP53701 268 aa0.9□□□□□ -2.27
LINC00643-201ENST00000334389 TAS2R20P59543 309 aa0.9□□□□□ -2.27
LINC00643-201ENST00000334389 PPP1R8Q12972 351 aaKnown RBP0.9□□□□□ -2.27
LINC00643-201ENST00000334389 CARD17Q5XLA6 110 aa0.9□□□□□ -2.27
LINC00643-201ENST00000334389 LYPD5Q6UWN5 251 aa0.9□□□□□ -2.27
LINC00643-201ENST00000334389 C9orf47Q6ZRZ4 202 aa0.9□□□□□ -2.27
LINC00643-201ENST00000334389 UBE2DNLQ8IWF7 75 aa0.9□□□□□ -2.27
LINC00643-201ENST00000334389 CMTM1Q8IZ96 169 aa0.9□□□□□ -2.27
LINC00643-201ENST00000334389 OR10H4Q8NGA5 316 aa0.9□□□□□ -2.27
LINC00643-201ENST00000334389 RPUSD4Q96CM3 377 aaKnown RBP0.9□□□□□ -2.27
LINC00643-201ENST00000334389 MIEN1Q9BRT3 115 aa0.9□□□□□ -2.27
LINC00643-201ENST00000334389 SPANXB1Q9NS25 103 aaPredicted RBP0.9□□□□□ -2.27
LINC00643-201ENST00000334389 HIGD1BQ9P298 99 aa0.9□□□□□ -2.27
LINC00643-201ENST00000334389 NAT8BQ9UHF3 227 aa0.9□□□□□ -2.27
LINC00643-201ENST00000334389 AK6Q9Y3D8 172 aaKnown RBP0.9□□□□□ -2.27
LINC00643-201ENST00000334389 A0A087WX48 190 aa0.89□□□□□ -2.27
LINC00643-201ENST00000334389 KRTAP23-1A1A580 65 aa0.89□□□□□ -2.27
LINC00643-201ENST00000334389 A6NDN8 102 aa0.89□□□□□ -2.27
LINC00643-201ENST00000334389 NDUFC2-KCTD14E9PQ53 114 aa0.89□□□□□ -2.27
LINC00643-201ENST00000334389 H3BRN7 92 aa0.89□□□□□ -2.27
LINC00643-201ENST00000334389 LYRM1O43325 122 aa0.89□□□□□ -2.27
LINC00643-201ENST00000334389 PGLYRP1O75594 196 aaPredicted RBP0.89□□□□□ -2.27
LINC00643-201ENST00000334389 SFT2D2O95562 160 aa0.89□□□□□ -2.27
LINC00643-201ENST00000334389 RNASE2P10153 161 aaKnown RBP0.89□□□□□ -2.27
LINC00643-201ENST00000334389 RAB5AP20339 215 aa0.89□□□□□ -2.27
LINC00643-201ENST00000334389 CDK2P24941 298 aa0.89□□□□□ -2.27
LINC00643-201ENST00000334389 RPL27AP46776 148 aaKnown RBP0.89□□□□□ -2.27
LINC00643-201ENST00000334389 ZNF134P52741 427 aa0.89□□□□□ -2.27
LINC00643-201ENST00000334389 MFAP4P55083 255 aa0.89□□□□□ -2.27
LINC00643-201ENST00000334389 SNRPEP62304 92 aaKnown RBP0.89□□□□□ -2.27
LINC00643-201ENST00000334389 NDPQ00604 133 aa0.89□□□□□ -2.27
LINC00643-201ENST00000334389 MIAQ16674 131 aa0.89□□□□□ -2.27
LINC00643-201ENST00000334389 TMEM128Q5BJH2 165 aa0.89□□□□□ -2.27
LINC00643-201ENST00000334389 TMEM182Q6ZP80 229 aaPredicted RBP0.89□□□□□ -2.27
LINC00643-201ENST00000334389 NRARPQ7Z6K4 114 aa0.89□□□□□ -2.27
LINC00643-201ENST00000334389 LYG1Q8N1E2 194 aa0.89□□□□□ -2.27
LINC00643-201ENST00000334389 OR13C9Q8NGT0 318 aa0.89□□□□□ -2.27
LINC00643-201ENST00000334389 CIRBP-AS1Q8TBR5 109 aa0.89□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms