RNA–Protein interactions for RNA: ENST00000334218.9

CDC42BPA-201, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,134 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-201ENST00000334218 CRYGAP11844 174 aa4.87□□□□□ -1.63
CDC42BPA-201ENST00000334218 ZNF134P52741 427 aa4.87□□□□□ -1.63
CDC42BPA-201ENST00000334218 DEFB112Q30KQ8 113 aa4.87□□□□□ -1.63
CDC42BPA-201ENST00000334218 LRP4O75096 1905 aa4.87□□□□□ -1.63
CDC42BPA-201ENST00000334218 TRBV25-1A0A075B6N4 114 aa4.87□□□□□ -1.63
CDC42BPA-201ENST00000334218 TM4SF5O14894 197 aa4.87□□□□□ -1.63
CDC42BPA-201ENST00000334218 ZSWIM8A7E2V4 1837 aa4.87□□□□□ -1.63
CDC42BPA-201ENST00000334218 TRAV40A0A0B4J280 105 aa4.87□□□□□ -1.63
CDC42BPA-201ENST00000334218 DPTQ07507 201 aa4.87□□□□□ -1.63
CDC42BPA-201ENST00000334218 RPL36AP83881 106 aaKnown RBP4.87□□□□□ -1.63
CDC42BPA-201ENST00000334218 UNQ9370/PRO34162Q6UXP9 181 aa4.87□□□□□ -1.63
CDC42BPA-201ENST00000334218 RPL36ALQ969Q0 106 aaKnown RBP4.87□□□□□ -1.63
CDC42BPA-201ENST00000334218 Q6JHZ5 121 aa4.86□□□□□ -1.63
CDC42BPA-201ENST00000334218 TM2D1Q9BX74 207 aa4.86□□□□□ -1.63
CDC42BPA-201ENST00000334218 TMEM14BQ9NUH8 114 aa4.86□□□□□ -1.63
CDC42BPA-201ENST00000334218 HCRTO43612 131 aa4.86□□□□□ -1.63
CDC42BPA-201ENST00000334218 PGLYRP1O75594 196 aaPredicted RBP4.86□□□□□ -1.63
CDC42BPA-201ENST00000334218 ZNF525Q8N782 197 aa4.86□□□□□ -1.63
CDC42BPA-201ENST00000334218 NDUFA12Q9UI09 145 aa4.86□□□□□ -1.63
CDC42BPA-201ENST00000334218 Q6P435 159 aa4.86□□□□□ -1.63
CDC42BPA-201ENST00000334218 Q6ZVQ6 151 aa4.86□□□□□ -1.63
CDC42BPA-201ENST00000334218 ARMS2P0C7Q2 107 aa4.86□□□□□ -1.63
CDC42BPA-201ENST00000334218 FAM110DQ8TAY7 271 aaPredicted RBP4.86□□□□□ -1.63
CDC42BPA-201ENST00000334218 C15orf61A6NNL5 157 aa4.86□□□□□ -1.63
CDC42BPA-201ENST00000334218 COL9A3Q14050 684 aaPredicted RBP4.86□□□□□ -1.63
CDC42BPA-201ENST00000334218 LMO7DNF2Z398 122 aa4.86□□□□□ -1.63
CDC42BPA-201ENST00000334218 C7orf65Q6ZTY9 151 aa4.86□□□□□ -1.63
CDC42BPA-201ENST00000334218 HCSTQ9UBK5 93 aa4.86□□□□□ -1.63
CDC42BPA-201ENST00000334218 COL5A1P20908 1838 aaPredicted RBP4.86□□□□□ -1.63
CDC42BPA-201ENST00000334218 I3L3M4 83 aa4.86□□□□□ -1.63
CDC42BPA-201ENST00000334218 LMO1P25800 156 aa4.86□□□□□ -1.63
CDC42BPA-201ENST00000334218 TRIP6Q15654 476 aaKnown RBP4.85□□□□□ -1.63
CDC42BPA-201ENST00000334218 ROS1P08922 2347 aa4.85□□□□□ -1.63
CDC42BPA-201ENST00000334218 NSUN5P1Q3KNT7 163 aa4.85□□□□□ -1.63
CDC42BPA-201ENST00000334218 C17orf77Q96MU5 243 aa4.85□□□□□ -1.63
CDC42BPA-201ENST00000334218 DSCR4P56555 118 aaPredicted RBP4.85□□□□□ -1.63
CDC42BPA-201ENST00000334218 SOSTDC1Q6X4U4 206 aa4.85□□□□□ -1.63
CDC42BPA-201ENST00000334218 Q8TCH9 128 aa4.85□□□□□ -1.63
CDC42BPA-201ENST00000334218 SCRT1Q9BWW7 348 aa4.85□□□□□ -1.63
CDC42BPA-201ENST00000334218 A0A0J9YXY3 114 aa4.85□□□□□ -1.63
CDC42BPA-201ENST00000334218 MSGN1A6NI15 193 aa4.85□□□□□ -1.63
CDC42BPA-201ENST00000334218 SCRG1O75711 98 aa4.85□□□□□ -1.63
CDC42BPA-201ENST00000334218 TMEM61Q8N0U2 210 aa4.85□□□□□ -1.63
CDC42BPA-201ENST00000334218 TM2D2Q9BX73 214 aa4.85□□□□□ -1.63
CDC42BPA-201ENST00000334218 GVINP1Q7Z2Y8 2422 aa4.85□□□□□ -1.63
CDC42BPA-201ENST00000334218 SDIM1Q6ZPB5 146 aa4.85□□□□□ -1.63
CDC42BPA-201ENST00000334218 SPATA12Q7Z6I5 190 aa4.85□□□□□ -1.63
CDC42BPA-201ENST00000334218 TRAV4A0A0B4J268 109 aa4.85□□□□□ -1.63
CDC42BPA-201ENST00000334218 PRYO14603 147 aa4.85□□□□□ -1.63
CDC42BPA-201ENST00000334218 LHFPL1Q86WI0 220 aa4.85□□□□□ -1.63
CDC42BPA-201ENST00000334218 ZNF501Q96CX3 271 aaPredicted RBP4.85□□□□□ -1.63
CDC42BPA-201ENST00000334218 AJUBAQ96IF1 538 aa4.85□□□□□ -1.63
CDC42BPA-201ENST00000334218 IGHV1-45A0A0A0MS14 117 aa4.85□□□□□ -1.63
CDC42BPA-201ENST00000334218 ETV2O00321 342 aaPredicted RBP4.85□□□□□ -1.63
CDC42BPA-201ENST00000334218 IGLV3-27P01718 113 aa4.85□□□□□ -1.63
CDC42BPA-201ENST00000334218 CRIPAKQ8N1N5 446 aa4.85□□□□□ -1.63
CDC42BPA-201ENST00000334218 FAM30AQ9NZY2 134 aa4.84□□□□□ -1.63
CDC42BPA-201ENST00000334218 IGHV1OR15-9A0A0B4J2B8 117 aa4.84□□□□□ -1.63
CDC42BPA-201ENST00000334218 EFNB3Q15768 340 aa4.84□□□□□ -1.63
CDC42BPA-201ENST00000334218 CSRP2Q16527 193 aa4.84□□□□□ -1.63
CDC42BPA-201ENST00000334218 ATP11AUNQ6ZP68 121 aa4.84□□□□□ -1.63
CDC42BPA-201ENST00000334218 COX8CQ7Z4L0 72 aa4.84□□□□□ -1.63
CDC42BPA-201ENST00000334218 TFF2Q03403 129 aa4.84□□□□□ -1.63
CDC42BPA-201ENST00000334218 ITLN2Q8WWU7 325 aaPredicted RBP4.84□□□□□ -1.63
CDC42BPA-201ENST00000334218 GFI1Q99684 422 aa4.84□□□□□ -1.63
CDC42BPA-201ENST00000334218 PRR19A6NJB7 356 aa4.84□□□□□ -1.63
CDC42BPA-201ENST00000334218 SEC61BP60468 96 aaKnown RBP4.84□□□□□ -1.63
CDC42BPA-201ENST00000334218 C19orf48Q6RUI8 117 aa4.84□□□□□ -1.63
CDC42BPA-201ENST00000334218 HTN1P15515 57 aa4.84□□□□□ -1.63
CDC42BPA-201ENST00000334218 CCL3L1P16619 93 aa4.84□□□□□ -1.64
CDC42BPA-201ENST00000334218 C5orf63A6NC05 138 aa4.84□□□□□ -1.64
CDC42BPA-201ENST00000334218 IGHV1OR21-1A0A087WYE8 117 aa4.83□□□□□ -1.64
CDC42BPA-201ENST00000334218 IGKV4-1P06312 121 aa4.83□□□□□ -1.64
CDC42BPA-201ENST00000334218 CD177Q8N6Q3 437 aa4.83□□□□□ -1.64
CDC42BPA-201ENST00000334218 HIGD2AQ9BW72 106 aa4.83□□□□□ -1.64
CDC42BPA-201ENST00000334218 TRBV5-7A0A0A0MS05 114 aa4.83□□□□□ -1.64
CDC42BPA-201ENST00000334218 XGP55808 180 aa4.83□□□□□ -1.64
CDC42BPA-201ENST00000334218 WDR86Q86TI4 376 aa4.83□□□□□ -1.64
CDC42BPA-201ENST00000334218 DEFB124Q8NES8 71 aa4.83□□□□□ -1.64
CDC42BPA-201ENST00000334218 IGHV1-69P01742 117 aa4.83□□□□□ -1.64
CDC42BPA-201ENST00000334218 C16orf97H3BN30 126 aa4.83□□□□□ -1.64
CDC42BPA-201ENST00000334218 SHANK3Q9BYB0 1731 aa4.83□□□□□ -1.64
CDC42BPA-201ENST00000334218 SDHAF1A6NFY7 115 aa4.83□□□□□ -1.64
CDC42BPA-201ENST00000334218 SPINK9Q5DT21 86 aa4.83□□□□□ -1.64
CDC42BPA-201ENST00000334218 MRPL14Q6P1L8 145 aaKnown RBP4.83□□□□□ -1.64
CDC42BPA-201ENST00000334218 WFDC3Q8IUB2 231 aa4.83□□□□□ -1.64
CDC42BPA-201ENST00000334218 TRGV8A0A0C4DH27 118 aa4.83□□□□□ -1.64
CDC42BPA-201ENST00000334218 IGF1P05019 195 aa4.83□□□□□ -1.64
CDC42BPA-201ENST00000334218 CCL4P13236 92 aa4.83□□□□□ -1.64
CDC42BPA-201ENST00000334218 COL11A2P13942 1736 aaPredicted RBP4.83□□□□□ -1.64
CDC42BPA-201ENST00000334218 CCL26Q9Y258 94 aa4.83□□□□□ -1.64
CDC42BPA-201ENST00000334218 WISP1O95388 367 aa4.82□□□□□ -1.64
CDC42BPA-201ENST00000334218 KIAA1549LQ6ZVL6 1849 aa4.82□□□□□ -1.64
CDC42BPA-201ENST00000334218 Q6ZNB5 142 aa4.82□□□□□ -1.64
CDC42BPA-201ENST00000334218 TMEM14CQ9P0S9 112 aa4.82□□□□□ -1.64
CDC42BPA-201ENST00000334218 TRBV7-6A0A0J9YX20 115 aa4.82□□□□□ -1.64
CDC42BPA-201ENST00000334218 SHANK2-AS3Q9BTD1 123 aa4.82□□□□□ -1.64
CDC42BPA-201ENST00000334218 IGLV3-25P01717 112 aa4.82□□□□□ -1.64
CDC42BPA-201ENST00000334218 PIK3CD-AS1Q5SR53 167 aa4.82□□□□□ -1.64
CDC42BPA-201ENST00000334218 SPTY2D1-AS1A0A0U1RR47 76 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms