RNA–Protein interactions for RNA: ENST00000333990.10

POLR1B-202, Transcript of RNA polymerase I subunit B, humanhuman

TSL 1 (best)

Gene POLR1B, Length 4,376 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1B-202ENST00000333990 SS18Q15532 418 aa8.7□□□□□ -1.02
POLR1B-202ENST00000333990 PHLDA1Q8WV24 401 aaPredicted RBP8.7□□□□□ -1.02
POLR1B-202ENST00000333990 MBD6Q96DN6 1003 aa8.7□□□□□ -1.02
POLR1B-202ENST00000333990 ZC2HC1AQ96GY0 325 aa8.7□□□□□ -1.02
POLR1B-202ENST00000333990 IGKV3D-20A0A0C4DH25 116 aa8.7□□□□□ -1.02
POLR1B-202ENST00000333990 LTAP01374 205 aa8.7□□□□□ -1.02
POLR1B-202ENST00000333990 PLNP26678 52 aa8.7□□□□□ -1.02
POLR1B-202ENST00000333990 CKS1BP61024 79 aa8.7□□□□□ -1.02
POLR1B-202ENST00000333990 DMRT1Q9Y5R6 373 aa8.7□□□□□ -1.02
POLR1B-202ENST00000333990 GAGE12JA6NER3 117 aa8.69□□□□□ -1.02
POLR1B-202ENST00000333990 F6UB75 175 aa8.69□□□□□ -1.02
POLR1B-202ENST00000333990 GAGE1Q13065 139 aa8.69□□□□□ -1.02
POLR1B-202ENST00000333990 GAGE4Q13068 117 aa8.69□□□□□ -1.02
POLR1B-202ENST00000333990 GAGE5Q13069 117 aa8.69□□□□□ -1.02
POLR1B-202ENST00000333990 GAGE13Q4V321 117 aa8.69□□□□□ -1.02
POLR1B-202ENST00000333990 HIST2H2BCQ6DN03 193 aa8.69□□□□□ -1.02
POLR1B-202ENST00000333990 PATE2Q6UY27 113 aa8.69□□□□□ -1.02
POLR1B-202ENST00000333990 NDUFA11Q86Y39 141 aa8.69□□□□□ -1.02
POLR1B-202ENST00000333990 RASL10AQ92737 203 aa8.69□□□□□ -1.02
POLR1B-202ENST00000333990 TMEM213A2RRL7 107 aa8.69□□□□□ -1.02
POLR1B-202ENST00000333990 INAFM1C9JVW0 142 aa8.69□□□□□ -1.02
POLR1B-202ENST00000333990 PLEKHB2Q96CS7 222 aa8.69□□□□□ -1.02
POLR1B-202ENST00000333990 ABCA12Q86UK0 2595 aa8.69□□□□□ -1.02
POLR1B-202ENST00000333990 TRAV9-2A0A087WT02 112 aa8.69□□□□□ -1.02
POLR1B-202ENST00000333990 E7EUB6 86 aa8.69□□□□□ -1.02
POLR1B-202ENST00000333990 LY6LH3BQJ8 138 aa8.69□□□□□ -1.02
POLR1B-202ENST00000333990 HLA-DMBP28068 263 aa8.69□□□□□ -1.02
POLR1B-202ENST00000333990 RPL24P83731 157 aaKnown RBP8.69□□□□□ -1.02
POLR1B-202ENST00000333990 RBMY1BA6NDE4 496 aaKnown RBP8.68□□□□□ -1.02
POLR1B-202ENST00000333990 RBMY1EA6NEQ0 496 aaKnown RBP8.68□□□□□ -1.02
POLR1B-202ENST00000333990 RBMY1DP0C7P1 496 aaKnown RBP8.68□□□□□ -1.02
POLR1B-202ENST00000333990 RBMY1A1P0DJD3 496 aaKnown RBP8.68□□□□□ -1.02
POLR1B-202ENST00000333990 RBMY1CP0DJD4 496 aa8.68□□□□□ -1.02
POLR1B-202ENST00000333990 ADCYAP1P18509 176 aa8.68□□□□□ -1.02
POLR1B-202ENST00000333990 ZNF462Q96JM2 2506 aa8.68□□□□□ -1.02
POLR1B-202ENST00000333990 V9GYV3 84 aa8.68□□□□□ -1.02
POLR1B-202ENST00000333990 I3L3M4 83 aa8.68□□□□□ -1.02
POLR1B-202ENST00000333990 PIFOQ8TCI5 191 aa8.68□□□□□ -1.02
POLR1B-202ENST00000333990 CFHR3Q02985 330 aa8.68□□□□□ -1.02
POLR1B-202ENST00000333990 LYPD6BQ8NI32 183 aa8.68□□□□□ -1.02
POLR1B-202ENST00000333990 RHOHQ15669 191 aa8.67□□□□□ -1.02
POLR1B-202ENST00000333990 Q6ZPA2 131 aa8.67□□□□□ -1.02
POLR1B-202ENST00000333990 EPG5Q9HCE0 2579 aa8.67□□□□□ -1.02
POLR1B-202ENST00000333990 SDHAF1A6NFY7 115 aa8.67□□□□□ -1.02
POLR1B-202ENST00000333990 RNF151Q2KHN1 245 aa8.67□□□□□ -1.02
POLR1B-202ENST00000333990 C14orf144Q96I85 54 aa8.67□□□□□ -1.02
POLR1B-202ENST00000333990 SMKR1H3BMG3 65 aa8.67□□□□□ -1.02
POLR1B-202ENST00000333990 TYMSP04818 313 aa8.67□□□□□ -1.02
POLR1B-202ENST00000333990 SMIM13P0DJ93 91 aa8.67□□□□□ -1.02
POLR1B-202ENST00000333990 ZNRF2Q8NHG8 242 aa8.67□□□□□ -1.02
POLR1B-202ENST00000333990 PAX4O43316 350 aa8.66□□□□□ -1.02
POLR1B-202ENST00000333990 CIDEAO60543 219 aa8.66□□□□□ -1.02
POLR1B-202ENST00000333990 CD300EQ496F6 205 aaPredicted RBP8.66□□□□□ -1.02
POLR1B-202ENST00000333990 LINC00518Q8N0U6 118 aa8.66□□□□□ -1.02
POLR1B-202ENST00000333990 TMEM243Q9BU79 118 aa8.66□□□□□ -1.02
POLR1B-202ENST00000333990 GAGE10A6NGK3 116 aa8.66□□□□□ -1.02
POLR1B-202ENST00000333990 APRG1Q8IVJ8 170 aa8.66□□□□□ -1.02
POLR1B-202ENST00000333990 HIST1H2BLQ99880 126 aa8.66□□□□□ -1.02
POLR1B-202ENST00000333990 GSN-AS1Q9NRJ2 163 aa8.66□□□□□ -1.02
POLR1B-202ENST00000333990 IGHV3-16A0A0C4DH30 117 aa8.66□□□□□ -1.02
POLR1B-202ENST00000333990 TRBV7-9A0A0J9YWB2 115 aa8.66□□□□□ -1.02
POLR1B-202ENST00000333990 SMIM27A0A1W2PRY6 76 aa8.66□□□□□ -1.02
POLR1B-202ENST00000333990 LY6G6DO95868 133 aa8.66□□□□□ -1.02
POLR1B-202ENST00000333990 C16orf74Q96GX8 76 aa8.66□□□□□ -1.02
POLR1B-202ENST00000333990 IGF2BP2-AS1Q96M15 143 aa8.66□□□□□ -1.02
POLR1B-202ENST00000333990 IGKV1OR2-108A0A075B7D4 117 aa8.66□□□□□ -1.02
POLR1B-202ENST00000333990 ZNF815PA8K554 130 aa8.66□□□□□ -1.02
POLR1B-202ENST00000333990 SPART-AS1P0CW21 52 aa8.66□□□□□ -1.02
POLR1B-202ENST00000333990 Q0VG73 95 aa8.66□□□□□ -1.02
POLR1B-202ENST00000333990 C6orf226Q5I0X4 101 aa8.66□□□□□ -1.02
POLR1B-202ENST00000333990 SHISA2Q6UWI4 295 aa8.66□□□□□ -1.02
POLR1B-202ENST00000333990 TMEM61Q8N0U2 210 aa8.66□□□□□ -1.02
POLR1B-202ENST00000333990 Q8N8P6 123 aa8.66□□□□□ -1.02
POLR1B-202ENST00000333990 SMAD5-AS1Q9Y6J3 95 aa8.66□□□□□ -1.02
POLR1B-202ENST00000333990 RMI2Q96E14 147 aa8.65□□□□□ -1.02
POLR1B-202ENST00000333990 FAM167A-AS1Q96KT0 104 aa8.65□□□□□ -1.02
POLR1B-202ENST00000333990 SORL1Q92673 2214 aa8.65□□□□□ -1.02
POLR1B-202ENST00000333990 A0A087X0K7 114 aa8.65□□□□□ -1.02
POLR1B-202ENST00000333990 UBE2CO00762 179 aa8.65□□□□□ -1.02
POLR1B-202ENST00000333990 BRWD1-AS2P59051 145 aa8.65□□□□□ -1.02
POLR1B-202ENST00000333990 Q6ZSV7 163 aa8.65□□□□□ -1.02
POLR1B-202ENST00000333990 HIST3H2BBQ8N257 126 aa8.65□□□□□ -1.02
POLR1B-202ENST00000333990 C20orf144Q9BQM9 153 aa8.65□□□□□ -1.02
POLR1B-202ENST00000333990 KIAA1549Q9HCM3 1950 aa8.65□□□□□ -1.03
POLR1B-202ENST00000333990 TRAV13-1A0A0B4J241 112 aa8.65□□□□□ -1.03
POLR1B-202ENST00000333990 MRPL36Q9P0J6 103 aaKnown RBP8.65□□□□□ -1.03
POLR1B-202ENST00000333990 POLR3KQ9Y2Y1 108 aaPredicted RBP8.65□□□□□ -1.03
POLR1B-202ENST00000333990 TMEM238C9JI98 176 aa8.64□□□□□ -1.03
POLR1B-202ENST00000333990 LGALS9O00182 355 aa8.64□□□□□ -1.03
POLR1B-202ENST00000333990 CRYGBP07316 175 aa8.64□□□□□ -1.03
POLR1B-202ENST00000333990 C21orf62-AS1Q17RA5 79 aa8.64□□□□□ -1.03
POLR1B-202ENST00000333990 C2orf66Q6UXQ4 117 aa8.64□□□□□ -1.03
POLR1B-202ENST00000333990 C20orf78Q9BR46 151 aa8.64□□□□□ -1.03
POLR1B-202ENST00000333990 U3KQE9 123 aa8.64□□□□□ -1.03
POLR1B-202ENST00000333990 MRPL51Q4U2R6 128 aaKnown RBP8.64□□□□□ -1.03
POLR1B-202ENST00000333990 TMEM141Q96I45 108 aa8.64□□□□□ -1.03
POLR1B-202ENST00000333990 RNASE1P07998 156 aaKnown RBP8.64□□□□□ -1.03
POLR1B-202ENST00000333990 EIF4EBP1Q13541 118 aaPredicted RBP8.64□□□□□ -1.03
POLR1B-202ENST00000333990 C9orf47Q6ZRZ4 202 aa8.64□□□□□ -1.03
POLR1B-202ENST00000333990 MRAPQ8TCY5 172 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms