RNA–Protein interactions for RNA: ENST00000333896.5

SPTBN1-201, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best) BASIC

Gene SPTBN1, Length 9,075 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-201ENST00000333896 FAM236DA0A1B0GTK5 79 aa8.37□□□□□ -1.07
SPTBN1-201ENST00000333896 ARMS2P0C7Q2 107 aa8.37□□□□□ -1.07
SPTBN1-201ENST00000333896 FAM236CP0DP71 79 aa8.37□□□□□ -1.07
SPTBN1-201ENST00000333896 PDE6GP18545 87 aa8.37□□□□□ -1.07
SPTBN1-201ENST00000333896 CFHR2P36980 270 aa8.37□□□□□ -1.07
SPTBN1-201ENST00000333896 CMC4P56277 68 aaPredicted RBP8.37□□□□□ -1.07
SPTBN1-201ENST00000333896 IGKV3D-7A0A0C4DH55 119 aa8.36□□□□□ -1.07
SPTBN1-201ENST00000333896 PRR19A6NJB7 356 aa8.36□□□□□ -1.07
SPTBN1-201ENST00000333896 H0YGX0 51 aa8.36□□□□□ -1.07
SPTBN1-201ENST00000333896 TDRG1Q3Y452 100 aa8.36□□□□□ -1.07
SPTBN1-201ENST00000333896 Q6Q795 121 aa8.36□□□□□ -1.07
SPTBN1-201ENST00000333896 TMEM133Q9H2Q1 129 aa8.36□□□□□ -1.07
SPTBN1-201ENST00000333896 I3L3M4 83 aa8.36□□□□□ -1.07
SPTBN1-201ENST00000333896 MRPL51Q4U2R6 128 aaKnown RBP8.36□□□□□ -1.07
SPTBN1-201ENST00000333896 IGHV3-16A0A0C4DH30 117 aa8.36□□□□□ -1.07
SPTBN1-201ENST00000333896 TRBV10-2A0A0K0K1G8 114 aa8.36□□□□□ -1.07
SPTBN1-201ENST00000333896 M0R1W7 72 aa8.36□□□□□ -1.07
SPTBN1-201ENST00000333896 HERVK_113P63121 156 aa8.36□□□□□ -1.07
SPTBN1-201ENST00000333896 CFHR4Q92496 578 aa8.36□□□□□ -1.07
SPTBN1-201ENST00000333896 TMEM14CQ9P0S9 112 aa8.36□□□□□ -1.07
SPTBN1-201ENST00000333896 ICOSQ9Y6W8 199 aa8.36□□□□□ -1.07
SPTBN1-201ENST00000333896 CCL3L1P16619 93 aa8.36□□□□□ -1.07
SPTBN1-201ENST00000333896 TRBV7-1A0A0A6YYK4 115 aa8.36□□□□□ -1.07
SPTBN1-201ENST00000333896 C2orf66Q6UXQ4 117 aa8.35□□□□□ -1.07
SPTBN1-201ENST00000333896 SPATA12Q7Z6I5 190 aa8.35□□□□□ -1.07
SPTBN1-201ENST00000333896 TMEM14BQ9NUH8 114 aa8.35□□□□□ -1.07
SPTBN1-201ENST00000333896 CECR9P0C854 216 aa8.35□□□□□ -1.07
SPTBN1-201ENST00000333896 JMJD7-PLA2G4BH0Y9G9 81 aa8.35□□□□□ -1.07
SPTBN1-201ENST00000333896 NTF4P34130 210 aa8.35□□□□□ -1.07
SPTBN1-201ENST00000333896 CLPSL2Q6UWE3 100 aa8.35□□□□□ -1.07
SPTBN1-201ENST00000333896 IGKV1D-8A0A087WSZ0 117 aa8.35□□□□□ -1.07
SPTBN1-201ENST00000333896 CENPVL3A0A0U1RRI6 287 aa8.35□□□□□ -1.07
SPTBN1-201ENST00000333896 TEX22C9J3V5 150 aa8.35□□□□□ -1.07
SPTBN1-201ENST00000333896 IL15RAQ13261 267 aa8.35□□□□□ -1.07
SPTBN1-201ENST00000333896 COX6A1P12074 109 aa8.35□□□□□ -1.07
SPTBN1-201ENST00000333896 PRR30Q53SZ7 412 aaPredicted RBP8.35□□□□□ -1.07
SPTBN1-201ENST00000333896 MSRB2Q9Y3D2 182 aa8.35□□□□□ -1.07
SPTBN1-201ENST00000333896 IGHV1OR15-1A0A075B7D0 117 aa8.35□□□□□ -1.07
SPTBN1-201ENST00000333896 F5H768 121 aa8.35□□□□□ -1.07
SPTBN1-201ENST00000333896 LRP4O75096 1905 aa8.34□□□□□ -1.07
SPTBN1-201ENST00000333896 C3orf56Q8N813 242 aa8.34□□□□□ -1.07
SPTBN1-201ENST00000333896 RNF5Q99942 180 aa8.34□□□□□ -1.07
SPTBN1-201ENST00000333896 RAI1Q7Z5J4 1906 aaPredicted RBP8.34□□□□□ -1.07
SPTBN1-201ENST00000333896 DKK1O94907 266 aa8.34□□□□□ -1.07
SPTBN1-201ENST00000333896 CYYR1Q96J86 154 aa8.34□□□□□ -1.07
SPTBN1-201ENST00000333896 YPEL4Q96NS1 127 aa8.34□□□□□ -1.07
SPTBN1-201ENST00000333896 RHOHQ15669 191 aa8.34□□□□□ -1.07
SPTBN1-201ENST00000333896 ZCCHC24Q8N2G6 241 aaKnown RBP8.34□□□□□ -1.07
SPTBN1-201ENST00000333896 CRYGBP07316 175 aa8.34□□□□□ -1.07
SPTBN1-201ENST00000333896 CELA3BP08861 270 aa8.34□□□□□ -1.07
SPTBN1-201ENST00000333896 PATE3B3GLJ2 98 aa8.34□□□□□ -1.08
SPTBN1-201ENST00000333896 NTN3O00634 580 aaPredicted RBP8.33□□□□□ -1.08
SPTBN1-201ENST00000333896 C9orf139Q6ZV77 190 aa8.33□□□□□ -1.08
SPTBN1-201ENST00000333896 PCP2Q8IVA1 136 aa8.33□□□□□ -1.08
SPTBN1-201ENST00000333896 NDUFB8O95169 186 aa8.33□□□□□ -1.08
SPTBN1-201ENST00000333896 IGFL4Q6B9Z1 124 aa8.33□□□□□ -1.08
SPTBN1-201ENST00000333896 NDUFB1O75438 58 aa8.33□□□□□ -1.08
SPTBN1-201ENST00000333896 IGHV1-69DA0A0B4J2H0 117 aa8.33□□□□□ -1.08
SPTBN1-201ENST00000333896 ZNF501Q96CX3 271 aaPredicted RBP8.33□□□□□ -1.08
SPTBN1-201ENST00000333896 GTSF1Q8WW33 167 aa8.32□□□□□ -1.08
SPTBN1-201ENST00000333896 SETD2Q9BYW2 2564 aaPredicted RBP8.32□□□□□ -1.08
SPTBN1-201ENST00000333896 IGLV3-32A0A0A0MS00 114 aa8.32□□□□□ -1.08
SPTBN1-201ENST00000333896 NDUFA12Q9UI09 145 aa8.32□□□□□ -1.08
SPTBN1-201ENST00000333896 C8orf49Q96NF6 230 aa8.32□□□□□ -1.08
SPTBN1-201ENST00000333896 MT-ATP8P03928 68 aa8.32□□□□□ -1.08
SPTBN1-201ENST00000333896 TFF1P04155 84 aa8.32□□□□□ -1.08
SPTBN1-201ENST00000333896 TFF2Q03403 129 aa8.32□□□□□ -1.08
SPTBN1-201ENST00000333896 C16orf54Q6UWD8 224 aa8.32□□□□□ -1.08
SPTBN1-201ENST00000333896 TRAV26-2A0A0B4J265 109 aa8.32□□□□□ -1.08
SPTBN1-201ENST00000333896 LTAP01374 205 aa8.32□□□□□ -1.08
SPTBN1-201ENST00000333896 FAM27E3Q08E93 113 aa8.32□□□□□ -1.08
SPTBN1-201ENST00000333896 LYPD3O95274 346 aa8.31□□□□□ -1.08
SPTBN1-201ENST00000333896 LINC01620Q4KN68 170 aa8.31□□□□□ -1.08
SPTBN1-201ENST00000333896 SPTBN4Q9H254 2564 aa8.31□□□□□ -1.08
SPTBN1-201ENST00000333896 IGHV4OR15-8A0A075B7B6 117 aa8.31□□□□□ -1.08
SPTBN1-201ENST00000333896 A0A087WW49 117 aa8.31□□□□□ -1.08
SPTBN1-201ENST00000333896 VWC2Q2TAL6 325 aa8.31□□□□□ -1.08
SPTBN1-201ENST00000333896 KLHL30-AS1Q8NEE0 82 aa8.31□□□□□ -1.08
SPTBN1-201ENST00000333896 METRNQ9UJH8 293 aa8.31□□□□□ -1.08
SPTBN1-201ENST00000333896 PSG7Q13046 419 aa8.3□□□□□ -1.08
SPTBN1-201ENST00000333896 ZNF726P1Q15940 193 aa8.3□□□□□ -1.08
SPTBN1-201ENST00000333896 RNASE13Q5GAN3 156 aaKnown RBP8.3□□□□□ -1.08
SPTBN1-201ENST00000333896 E9PLD3 99 aa8.3□□□□□ -1.08
SPTBN1-201ENST00000333896 FXYD2P54710 66 aa8.3□□□□□ -1.08
SPTBN1-201ENST00000333896 RPL18AQ02543 176 aaKnown RBP8.3□□□□□ -1.08
SPTBN1-201ENST00000333896 WBP1Q96G27 269 aa8.3□□□□□ -1.08
SPTBN1-201ENST00000333896 LYZL4Q96KX0 146 aa8.3□□□□□ -1.08
SPTBN1-201ENST00000333896 IGHV3-38A0A0C4DH36 116 aa8.3□□□□□ -1.08
SPTBN1-201ENST00000333896 C17orf100A8MU93 164 aa8.3□□□□□ -1.08
SPTBN1-201ENST00000333896 IGKV4-1P06312 121 aa8.3□□□□□ -1.08
SPTBN1-201ENST00000333896 PMAIP1Q13794 54 aa8.3□□□□□ -1.08
SPTBN1-201ENST00000333896 SHANK2-AS3Q9BTD1 123 aa8.3□□□□□ -1.08
SPTBN1-201ENST00000333896 DKK2Q9UBU2 259 aa8.3□□□□□ -1.08
SPTBN1-201ENST00000333896 ANKRD17O75179 2603 aaKnown RBP8.3□□□□□ -1.08
SPTBN1-201ENST00000333896 TMEM213A2RRL7 107 aa8.29□□□□□ -1.08
SPTBN1-201ENST00000333896 TIMM17AQ99595 171 aa8.29□□□□□ -1.08
SPTBN1-201ENST00000333896 VMO1Q7Z5L0 202 aa8.29□□□□□ -1.08
SPTBN1-201ENST00000333896 COX7B2Q8TF08 81 aa8.29□□□□□ -1.08
SPTBN1-201ENST00000333896 DKK4Q9UBT3 224 aa8.29□□□□□ -1.08
SPTBN1-201ENST00000333896 SMIM9A6NGZ8 99 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms