RNA–Protein interactions for RNA: ENST00000333213.10

TSEN54-201, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSEN54, Length 1,944 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-201ENST00000333213 C18orf32Q8TCD1 76 aa17.37■□□□□ 0.37
TSEN54-201ENST00000333213 C8orf49Q96NF6 230 aa17.37■□□□□ 0.37
TSEN54-201ENST00000333213 PSMG4Q5JS54 123 aa17.36■□□□□ 0.37
TSEN54-201ENST00000333213 C9orf47Q6ZRZ4 202 aa17.36■□□□□ 0.37
TSEN54-201ENST00000333213 NIT1Q86X76 327 aa17.36■□□□□ 0.37
TSEN54-201ENST00000333213 PRR25Q96S07 402 aa17.36■□□□□ 0.37
TSEN54-201ENST00000333213 ZFP30Q9Y2G7 519 aa17.36■□□□□ 0.37
TSEN54-201ENST00000333213 ZNF256Q9Y2P7 627 aaPredicted RBP17.36■□□□□ 0.37
TSEN54-201ENST00000333213 GAGE1Q13065 139 aa17.35■□□□□ 0.37
TSEN54-201ENST00000333213 FAM162BQ5T6X4 162 aa17.35■□□□□ 0.37
TSEN54-201ENST00000333213 GDF5OSQ5U4N7 250 aa17.35■□□□□ 0.37
TSEN54-201ENST00000333213 NUP35Q8NFH5 326 aa17.35■□□□□ 0.37
TSEN54-201ENST00000333213 ZC2HC1AQ96GY0 325 aa17.35■□□□□ 0.37
TSEN54-201ENST00000333213 ZNF747Q9BV97 191 aa17.35■□□□□ 0.37
TSEN54-201ENST00000333213 IGLV1-51P01701 117 aa17.34■□□□□ 0.37
TSEN54-201ENST00000333213 SNRPD3P62318 126 aaKnown RBP17.34■□□□□ 0.37
TSEN54-201ENST00000333213 SLAQ13239 276 aa17.34■□□□□ 0.37
TSEN54-201ENST00000333213 PRR27Q6MZM9 219 aa17.34■□□□□ 0.37
TSEN54-201ENST00000333213 OR8A1Q8NGG7 326 aa17.34■□□□□ 0.37
TSEN54-201ENST00000333213 ZNF492Q9P255 531 aa17.34■□□□□ 0.37
TSEN54-201ENST00000333213 TRAV2A0A0B4J234 112 aa17.33■□□□□ 0.37
TSEN54-201ENST00000333213 A0A1B0GXF2 115 aa17.33■□□□□ 0.37
TSEN54-201ENST00000333213 PMCHP20382 165 aa17.33■□□□□ 0.37
TSEN54-201ENST00000333213 CRIP1P50238 77 aa17.33■□□□□ 0.37
TSEN54-201ENST00000333213 PMCHL1Q16048 86 aa17.33■□□□□ 0.37
TSEN54-201ENST00000333213 BORCS7Q96B45 105 aa17.33■□□□□ 0.37
TSEN54-201ENST00000333213 UQCR10Q9UDW1 63 aa17.33■□□□□ 0.37
TSEN54-201ENST00000333213 STAB1Q9NY15 2570 aa17.33■□□□□ 0.37
TSEN54-201ENST00000333213 C3orf79P0CE67 100 aa17.33■□□□□ 0.36
TSEN54-201ENST00000333213 SPAG8Q99932 426 aaPredicted RBP17.33■□□□□ 0.36
TSEN54-201ENST00000333213 TRAV25A0A0B4J276 109 aa17.32■□□□□ 0.36
TSEN54-201ENST00000333213 FBLL1A6NHQ2 334 aaKnown RBP17.32■□□□□ 0.36
TSEN54-201ENST00000333213 C20orf202A1L168 122 aa17.31■□□□□ 0.36
TSEN54-201ENST00000333213 NPIPB6E9PJ23 425 aa17.31■□□□□ 0.36
TSEN54-201ENST00000333213 CA1P00915 261 aaPredicted RBP17.31■□□□□ 0.36
TSEN54-201ENST00000333213 COX8CQ7Z4L0 72 aa17.31■□□□□ 0.36
TSEN54-201ENST00000333213 CT45A10P0DMU9 189 aa17.31■□□□□ 0.36
TSEN54-201ENST00000333213 ZNF138P52744 262 aa17.31■□□□□ 0.36
TSEN54-201ENST00000333213 HIST1H1AQ02539 215 aaPredicted RBP17.31■□□□□ 0.36
TSEN54-201ENST00000333213 SPATA45Q537H7 98 aa17.31■□□□□ 0.36
TSEN54-201ENST00000333213 TMEM78Q5T7P6 136 aa17.31■□□□□ 0.36
TSEN54-201ENST00000333213 ALKBH7Q9BT30 221 aaPredicted RBP17.31■□□□□ 0.36
TSEN54-201ENST00000333213 GFRA4Q9GZZ7 299 aa17.31■□□□□ 0.36
TSEN54-201ENST00000333213 COL6A5A8TX70 2615 aa17.3■□□□□ 0.36
TSEN54-201ENST00000333213 C19orf71A6NCJ1 209 aa17.3■□□□□ 0.36
TSEN54-201ENST00000333213 FAM231BA6NCW3 169 aa17.3■□□□□ 0.36
TSEN54-201ENST00000333213 ZNF80P51504 273 aaPredicted RBP17.3■□□□□ 0.36
TSEN54-201ENST00000333213 SAPCD1Q5SSQ6 148 aa17.3■□□□□ 0.36
TSEN54-201ENST00000333213 OR10J6PQ8NGY7 276 aa17.3■□□□□ 0.36
TSEN54-201ENST00000333213 PPP1R14DQ9NXH3 145 aa17.3■□□□□ 0.36
TSEN54-201ENST00000333213 HIGD1CA8MV81 97 aa17.29■□□□□ 0.36
TSEN54-201ENST00000333213 DMRTA1Q5VZB9 504 aa17.29■□□□□ 0.36
TSEN54-201ENST00000333213 A8MWL6 223 aa17.29■□□□□ 0.36
TSEN54-201ENST00000333213 IGLC3P0DOY3 106 aa17.29■□□□□ 0.36
TSEN54-201ENST00000333213 DEFB131AP59861 70 aa17.29■□□□□ 0.36
TSEN54-201ENST00000333213 C3orf56Q8N813 242 aa17.29■□□□□ 0.36
TSEN54-201ENST00000333213 TMEM158Q8WZ71 300 aa17.29■□□□□ 0.36
TSEN54-201ENST00000333213 LINC00477Q96M19 166 aa17.29■□□□□ 0.36
TSEN54-201ENST00000333213 RPP21Q9H633 154 aaKnown RBP17.29■□□□□ 0.36
TSEN54-201ENST00000333213 DLEU1O43261 78 aa17.28■□□□□ 0.36
TSEN54-201ENST00000333213 HSBP1O75506 76 aa17.28■□□□□ 0.36
TSEN54-201ENST00000333213 ZNF25P17030 456 aaPredicted RBP17.28■□□□□ 0.36
TSEN54-201ENST00000333213 COL5A1-AS1Q5SY13 56 aa17.28■□□□□ 0.36
TSEN54-201ENST00000333213 MAP6D1Q9H9H5 199 aa17.28■□□□□ 0.36
TSEN54-201ENST00000333213 A0A0J9YX75 114 aa17.27■□□□□ 0.36
TSEN54-201ENST00000333213 OR4C46A6NHA9 309 aa17.27■□□□□ 0.36
TSEN54-201ENST00000333213 HBBP68871 147 aa17.27■□□□□ 0.36
TSEN54-201ENST00000333213 FAM19A4Q96LR4 140 aa17.27■□□□□ 0.36
TSEN54-201ENST00000333213 AGRNO00468 2067 aa17.27■□□□□ 0.35
TSEN54-201ENST00000333213 ODF3L2Q3SX64 289 aa17.26■□□□□ 0.35
TSEN54-201ENST00000333213 C12orf54Q6X4T0 127 aa17.26■□□□□ 0.35
TSEN54-201ENST00000333213 TMEM208Q9BTX3 173 aa17.26■□□□□ 0.35
TSEN54-201ENST00000333213 PRR9Q5T870 116 aa17.25■□□□□ 0.35
TSEN54-201ENST00000333213 CMYA5Q8N3K9 4069 aa17.25■□□□□ 0.35
TSEN54-201ENST00000333213 KIR3DS1Q14943 382 aa17.25■□□□□ 0.35
TSEN54-201ENST00000333213 Q6ZQT7 251 aa17.25■□□□□ 0.35
TSEN54-201ENST00000333213 APRG1Q8IVJ8 170 aa17.25■□□□□ 0.35
TSEN54-201ENST00000333213 FAM19A2Q8N3H0 131 aa17.25■□□□□ 0.35
TSEN54-201ENST00000333213 ZFAND2AQ8N6M9 145 aa17.25■□□□□ 0.35
TSEN54-201ENST00000333213 NDFIP1Q9BT67 221 aa17.25■□□□□ 0.35
TSEN54-201ENST00000333213 KNCNA6PVL3 124 aa17.24■□□□□ 0.35
TSEN54-201ENST00000333213 LINC00614P0C842 121 aa17.24■□□□□ 0.35
TSEN54-201ENST00000333213 BTF3P20290 206 aaKnown RBP17.24■□□□□ 0.35
TSEN54-201ENST00000333213 NTF3P20783 257 aa17.24■□□□□ 0.35
TSEN54-201ENST00000333213 FOXI2Q6ZQN5 318 aa17.24■□□□□ 0.35
TSEN54-201ENST00000333213 WFDC9Q8NEX5 89 aa17.24■□□□□ 0.35
TSEN54-201ENST00000333213 NOTCH3Q9UM47 2321 aa17.24■□□□□ 0.35
TSEN54-201ENST00000333213 P01737 135 aa17.23■□□□□ 0.35
TSEN54-201ENST00000333213 G0S2P27469 103 aa17.23■□□□□ 0.35
TSEN54-201ENST00000333213 SHISA2Q6UWI4 295 aa17.23■□□□□ 0.35
TSEN54-201ENST00000333213 OR2K2Q8NGT1 345 aa17.23■□□□□ 0.35
TSEN54-201ENST00000333213 CHCHD1Q96BP2 118 aaKnown RBP17.23■□□□□ 0.35
TSEN54-201ENST00000333213 LENEPQ9Y5L5 61 aa17.23■□□□□ 0.35
TSEN54-201ENST00000333213 M0R2Z0 102 aa17.23■□□□□ 0.35
TSEN54-201ENST00000333213 SH2D1AO60880 128 aa17.23■□□□□ 0.35
TSEN54-201ENST00000333213 EBLN2Q6P2I7 272 aa17.23■□□□□ 0.35
TSEN54-201ENST00000333213 MRPS16Q9Y3D3 137 aaKnown RBP17.23■□□□□ 0.35
TSEN54-201ENST00000333213 ANK2Q01484 3957 aa17.23■□□□□ 0.35
TSEN54-201ENST00000333213 IGKV3-20P01619 116 aa17.22■□□□□ 0.35
TSEN54-201ENST00000333213 BEAN1Q3B7T3 259 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 82.9 ms