RNA–Protein interactions for RNA: ENST00000331728.8

LIMK2-201, Transcript of LIM domain kinase 2, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene LIMK2, Length 3,670 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2-201ENST00000331728 A0A1B0GWB2 263 aa6.72□□□□□ -1.33
LIMK2-201ENST00000331728 GAGE13Q4V321 117 aa6.72□□□□□ -1.33
LIMK2-201ENST00000331728 C14orf178Q8N769 122 aaPredicted RBP6.72□□□□□ -1.33
LIMK2-201ENST00000331728 GLMPQ8WWB7 406 aa6.72□□□□□ -1.33
LIMK2-201ENST00000331728 MRAP2Q96G30 205 aa6.72□□□□□ -1.33
LIMK2-201ENST00000331728 AGRNO00468 2067 aa6.72□□□□□ -1.33
LIMK2-201ENST00000331728 F8VRH5 84 aa6.72□□□□□ -1.33
LIMK2-201ENST00000331728 RNASE4P34096 147 aaKnown RBP6.72□□□□□ -1.33
LIMK2-201ENST00000331728 LYRM7Q5U5X0 104 aa6.72□□□□□ -1.33
LIMK2-201ENST00000331728 C1orf122Q6ZSJ8 110 aa6.72□□□□□ -1.33
LIMK2-201ENST00000331728 DPH3P1Q9H4G8 78 aa6.72□□□□□ -1.33
LIMK2-201ENST00000331728 ZNF815PA8K554 130 aa6.72□□□□□ -1.33
LIMK2-201ENST00000331728 SH2D6Q7Z4S9 175 aa6.72□□□□□ -1.33
LIMK2-201ENST00000331728 MTURNQ8N3F0 131 aa6.72□□□□□ -1.33
LIMK2-201ENST00000331728 ATP6V0BQ99437 205 aa6.72□□□□□ -1.33
LIMK2-201ENST00000331728 CNFNQ9BYD5 112 aa6.72□□□□□ -1.33
LIMK2-201ENST00000331728 MGAQ8IWI9 3026 aa6.71□□□□□ -1.33
LIMK2-201ENST00000331728 TRAV41A0A0B4J266 112 aa6.71□□□□□ -1.33
LIMK2-201ENST00000331728 NDUFS8O00217 210 aa6.71□□□□□ -1.33
LIMK2-201ENST00000331728 PF4V1P10720 104 aa6.71□□□□□ -1.33
LIMK2-201ENST00000331728 UBE2E1P51965 193 aa6.71□□□□□ -1.33
LIMK2-201ENST00000331728 SUMO2P61956 95 aaKnown RBP6.71□□□□□ -1.33
LIMK2-201ENST00000331728 CREBBPQ92793 2442 aa6.71□□□□□ -1.34
LIMK2-201ENST00000331728 K7ENP7 123 aa6.71□□□□□ -1.34
LIMK2-201ENST00000331728 SPRY2O43597 315 aa6.71□□□□□ -1.34
LIMK2-201ENST00000331728 IGHV3-11P01762 117 aa6.71□□□□□ -1.34
LIMK2-201ENST00000331728 RRN3P1Q2M238 152 aa6.71□□□□□ -1.34
LIMK2-201ENST00000331728 SFTA2Q6UW10 78 aa6.71□□□□□ -1.34
LIMK2-201ENST00000331728 AMTNQ6UX39 209 aa6.71□□□□□ -1.34
LIMK2-201ENST00000331728 MAPKAPK5-AS1Q8N8E1 139 aa6.71□□□□□ -1.34
LIMK2-201ENST00000331728 SPAG8Q99932 426 aaPredicted RBP6.71□□□□□ -1.34
LIMK2-201ENST00000331728 MSRB2Q9Y3D2 182 aa6.71□□□□□ -1.34
LIMK2-201ENST00000331728 SCGB1C2P0DMR2 95 aa6.71□□□□□ -1.34
LIMK2-201ENST00000331728 LY6EQ16553 131 aa6.71□□□□□ -1.34
LIMK2-201ENST00000331728 MRPL53Q96EL3 112 aaKnown RBP6.71□□□□□ -1.34
LIMK2-201ENST00000331728 SPATA25Q9BR10 227 aa6.71□□□□□ -1.34
LIMK2-201ENST00000331728 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.7□□□□□ -1.341e-6■■■■□ 23.1
LIMK2-201ENST00000331728 OVOL1O14753 267 aa6.7□□□□□ -1.34
LIMK2-201ENST00000331728 HOXA3O43365 443 aaPredicted RBP6.7□□□□□ -1.34
LIMK2-201ENST00000331728 APOMO95445 188 aa6.7□□□□□ -1.34
LIMK2-201ENST00000331728 PPP1R17O96001 155 aa6.7□□□□□ -1.34
LIMK2-201ENST00000331728 C2orf66Q6UXQ4 117 aa6.7□□□□□ -1.34
LIMK2-201ENST00000331728 LCNL1Q6ZST4 164 aa6.7□□□□□ -1.34
LIMK2-201ENST00000331728 LINC00477Q96M19 166 aa6.7□□□□□ -1.34
LIMK2-201ENST00000331728 ZFAND3Q9H8U3 227 aa6.7□□□□□ -1.34
LIMK2-201ENST00000331728 TNRC18O15417 2968 aaPredicted RBP6.7□□□□□ -1.34
LIMK2-201ENST00000331728 NPFFO15130 113 aa6.7□□□□□ -1.34
LIMK2-201ENST00000331728 ZFP36P26651 326 aaKnown RBP6.7□□□□□ -1.34
LIMK2-201ENST00000331728 KLRB1Q12918 225 aa6.7□□□□□ -1.34
LIMK2-201ENST00000331728 C11orf21Q9P2W6 132 aa6.7□□□□□ -1.34
LIMK2-201ENST00000331728 MYMXA0A1B0GTQ4 84 aa6.7□□□□□ -1.34
LIMK2-201ENST00000331728 Q8N6K4 173 aa6.7□□□□□ -1.34
LIMK2-201ENST00000331728 MOB4Q9Y3A3 225 aa6.7□□□□□ -1.34
LIMK2-201ENST00000331728 IGHG4P01861 327 aa6.69□□□□□ -1.34
LIMK2-201ENST00000331728 SVIPQ8NHG7 77 aa6.69□□□□□ -1.34
LIMK2-201ENST00000331728 DEFB104AQ8WTQ1 72 aa6.69□□□□□ -1.34
LIMK2-201ENST00000331728 CCDC140Q96MF4 163 aa6.69□□□□□ -1.34
LIMK2-201ENST00000331728 KIR2DL4Q99706 377 aa6.69□□□□□ -1.34
LIMK2-201ENST00000331728 PGPEP1Q9NXJ5 209 aa6.69□□□□□ -1.34
LIMK2-201ENST00000331728 EBI3Q14213 229 aa6.69□□□□□ -1.34
LIMK2-201ENST00000331728 TMEM170BQ5T4T1 132 aa6.69□□□□□ -1.34
LIMK2-201ENST00000331728 FAM159AQ6UWV7 190 aa6.69□□□□□ -1.34
LIMK2-201ENST00000331728 PRADC1Q9BSG0 188 aa6.69□□□□□ -1.34
LIMK2-201ENST00000331728 IGF2RP11717 2491 aa6.69□□□□□ -1.34
LIMK2-201ENST00000331728 LOC400499M0QZD8 3231 aa6.69□□□□□ -1.34
LIMK2-201ENST00000331728 BOD1L1Q8NFC6 3051 aa6.69□□□□□ -1.34
LIMK2-201ENST00000331728 NOTCH3Q9UM47 2321 aa6.69□□□□□ -1.34
LIMK2-201ENST00000331728 IGLV2-18A0A075B6J9 118 aa6.69□□□□□ -1.34
LIMK2-201ENST00000331728 CKS1BP61024 79 aa6.69□□□□□ -1.34
LIMK2-201ENST00000331728 FBXL19-AS1Q494R0 122 aa6.69□□□□□ -1.34
LIMK2-201ENST00000331728 FAM74A4Q5TZK3 123 aa6.69□□□□□ -1.34
LIMK2-201ENST00000331728 C9orf47Q6ZRZ4 202 aa6.69□□□□□ -1.34
LIMK2-201ENST00000331728 PSMB2P49721 201 aa6.68□□□□□ -1.34
LIMK2-201ENST00000331728 ANXA2RQ3ZCQ2 193 aa6.68□□□□□ -1.34
LIMK2-201ENST00000331728 ZNF418Q8TF45 676 aaPredicted RBP6.68□□□□□ -1.34
LIMK2-201ENST00000331728 RPL39LQ96EH5 51 aaKnown RBP6.68□□□□□ -1.34
LIMK2-201ENST00000331728 BPESC1Q9GZL8 116 aa6.68□□□□□ -1.34
LIMK2-201ENST00000331728 EMP1P54849 157 aa6.68□□□□□ -1.34
LIMK2-201ENST00000331728 TCF15Q12870 199 aa6.68□□□□□ -1.34
LIMK2-201ENST00000331728 CENPVL3A0A0U1RRI6 287 aa6.68□□□□□ -1.34
LIMK2-201ENST00000331728 FAM223BA6NKX1 122 aa6.68□□□□□ -1.34
LIMK2-201ENST00000331728 ID1P41134 155 aa6.68□□□□□ -1.34
LIMK2-201ENST00000331728 ZNF575Q86XF7 245 aa6.68□□□□□ -1.34
LIMK2-201ENST00000331728 FAM223AQ8IWN6 122 aa6.68□□□□□ -1.34
LIMK2-201ENST00000331728 NRACQ8N912 160 aa6.68□□□□□ -1.34
LIMK2-201ENST00000331728 C20orf78Q9BR46 151 aa6.68□□□□□ -1.34
LIMK2-201ENST00000331728 SIRPDQ9H106 197 aa6.68□□□□□ -1.34
LIMK2-201ENST00000331728 TRBV7-3A0A075B6L6 115 aa6.67□□□□□ -1.34
LIMK2-201ENST00000331728 TRAV8-2A0A0B4J237 113 aa6.67□□□□□ -1.34
LIMK2-201ENST00000331728 LINC01548A6NM66 108 aa6.67□□□□□ -1.34
LIMK2-201ENST00000331728 SLC25A16P16260 332 aa6.67□□□□□ -1.34
LIMK2-201ENST00000331728 UCNP55089 124 aa6.67□□□□□ -1.34
LIMK2-201ENST00000331728 Q1RN00 199 aa6.67□□□□□ -1.34
LIMK2-201ENST00000331728 LENEPQ9Y5L5 61 aa6.67□□□□□ -1.34
LIMK2-201ENST00000331728 TRAV12-1A0A0B4J245 112 aa6.67□□□□□ -1.34
LIMK2-201ENST00000331728 IGHV7-4-1A0A0J9YVY3 117 aa6.67□□□□□ -1.34
LIMK2-201ENST00000331728 SRD5A1P18405 259 aa6.67□□□□□ -1.34
LIMK2-201ENST00000331728 PAPPA-AS1Q5QFB9 102 aa6.67□□□□□ -1.34
LIMK2-201ENST00000331728 BRD3OSQ6XYD6 125 aa6.67□□□□□ -1.34
LIMK2-201ENST00000331728 PRSS29PA6NIE9 313 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms