RNA–Protein interactions for RNA: ENST00000330295.9

CTHRC1-201, Transcript of collagen triple helix repeat containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTHRC1, Length 1,271 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-201ENST00000330295 RNASE4P34096 147 aaKnown RBP9.96□□□□□ -0.82
CTHRC1-201ENST00000330295 Q6ZSA8 131 aa9.96□□□□□ -0.82
CTHRC1-201ENST00000330295 SH3BGRL3Q9H299 93 aa9.96□□□□□ -0.82
CTHRC1-201ENST00000330295 ZNF492Q9P255 531 aa9.96□□□□□ -0.82
CTHRC1-201ENST00000330295 A0A0D9SG52 128 aa9.95□□□□□ -0.82
CTHRC1-201ENST00000330295 K7EQM0 130 aa9.95□□□□□ -0.82
CTHRC1-201ENST00000330295 HMGB3O15347 200 aaKnown RBP9.95□□□□□ -0.82
CTHRC1-201ENST00000330295 STAG3L2P0CL84 134 aa9.95□□□□□ -0.82
CTHRC1-201ENST00000330295 STAG3L3P0CL85 134 aa9.95□□□□□ -0.82
CTHRC1-201ENST00000330295 CRISP2P16562 243 aa9.95□□□□□ -0.82
CTHRC1-201ENST00000330295 EIF5AP63241 154 aaKnown RBP9.95□□□□□ -0.82
CTHRC1-201ENST00000330295 IQCF2Q8IXL9 164 aa9.95□□□□□ -0.82
CTHRC1-201ENST00000330295 VGLL1Q99990 258 aa9.95□□□□□ -0.82
CTHRC1-201ENST00000330295 ARPC5LQ9BPX5 153 aa9.95□□□□□ -0.82
CTHRC1-201ENST00000330295 LENEPQ9Y5L5 61 aa9.95□□□□□ -0.82
CTHRC1-201ENST00000330295 SERTM2A0A1B0GWG4 89 aa9.94□□□□□ -0.82
CTHRC1-201ENST00000330295 HMSDA8MTL9 139 aa9.94□□□□□ -0.82
CTHRC1-201ENST00000330295 KLLNB2CW77 178 aa9.94□□□□□ -0.82
CTHRC1-201ENST00000330295 DIRC3C9JPN6 131 aa9.94□□□□□ -0.82
CTHRC1-201ENST00000330295 H3BNG1 76 aa9.94□□□□□ -0.82
CTHRC1-201ENST00000330295 RGS13O14921 159 aa9.94□□□□□ -0.82
CTHRC1-201ENST00000330295 GAS8-AS1O95177 125 aa9.94□□□□□ -0.82
CTHRC1-201ENST00000330295 AZU1P20160 251 aa9.94□□□□□ -0.82
CTHRC1-201ENST00000330295 GCHFRP30047 84 aa9.94□□□□□ -0.82
CTHRC1-201ENST00000330295 ZNF345Q14585 488 aa9.94□□□□□ -0.82
CTHRC1-201ENST00000330295 ZNF680Q8NEM1 530 aa9.94□□□□□ -0.82
CTHRC1-201ENST00000330295 TMED6Q8WW62 240 aa9.94□□□□□ -0.82
CTHRC1-201ENST00000330295 RPH3ALQ9UNE2 315 aa9.94□□□□□ -0.82
CTHRC1-201ENST00000330295 CTXND1A0A1B0GTU2 59 aa9.93□□□□□ -0.82
CTHRC1-201ENST00000330295 KANTRA0A1W2PQU2 76 aa9.93□□□□□ -0.82
CTHRC1-201ENST00000330295 SMLR1H3BR10 107 aa9.93□□□□□ -0.82
CTHRC1-201ENST00000330295 RS1O15537 224 aa9.93□□□□□ -0.82
CTHRC1-201ENST00000330295 EIF3GO75821 320 aaKnown RBP eCLIP9.93□□□□□ -0.82
CTHRC1-201ENST00000330295 NXPH4O95158 308 aa9.93□□□□□ -0.82
CTHRC1-201ENST00000330295 KCNRGQ8N5I3 272 aa9.93□□□□□ -0.82
CTHRC1-201ENST00000330295 STOML3Q8TAV4 291 aa9.93□□□□□ -0.82
CTHRC1-201ENST00000330295 RNASE8Q8TDE3 154 aaKnown RBP9.93□□□□□ -0.82
CTHRC1-201ENST00000330295 ST6GAL2Q96JF0 529 aa9.93□□□□□ -0.82
CTHRC1-201ENST00000330295 FAM19A4Q96LR4 140 aa9.93□□□□□ -0.82
CTHRC1-201ENST00000330295 NDFIP1Q9BT67 221 aa9.93□□□□□ -0.82
CTHRC1-201ENST00000330295 NOP10Q9NPE3 64 aaKnown RBP9.93□□□□□ -0.82
CTHRC1-201ENST00000330295 G3V3Q6 166 aa9.92□□□□□ -0.82
CTHRC1-201ENST00000330295 PFDN1O60925 122 aa9.92□□□□□ -0.82
CTHRC1-201ENST00000330295 HOXA5P20719 270 aa9.92□□□□□ -0.82
CTHRC1-201ENST00000330295 BTN1A1Q13410 526 aa9.92□□□□□ -0.82
CTHRC1-201ENST00000330295 GOLT1AQ6ZVE7 132 aa9.92□□□□□ -0.82
CTHRC1-201ENST00000330295 EIF4E3Q8N5X7 224 aaKnown RBP9.92□□□□□ -0.82
CTHRC1-201ENST00000330295 C5orf17Q8NAS9 161 aa9.92□□□□□ -0.82
CTHRC1-201ENST00000330295 LINC00467Q9BRT7 94 aa9.92□□□□□ -0.82
CTHRC1-201ENST00000330295 MSRB1Q9NZV6 116 aa9.92□□□□□ -0.82
CTHRC1-201ENST00000330295 ZNF324O75467 553 aaPredicted RBP9.91□□□□□ -0.82
CTHRC1-201ENST00000330295 CD300CQ08708 224 aa9.91□□□□□ -0.82
CTHRC1-201ENST00000330295 ANXA2RQ3ZCQ2 193 aa9.91□□□□□ -0.82
CTHRC1-201ENST00000330295 ZFAND2AQ8N6M9 145 aa9.91□□□□□ -0.82
CTHRC1-201ENST00000330295 Q8TAT8 98 aa9.91□□□□□ -0.82
CTHRC1-201ENST00000330295 NKX6-2Q9C056 277 aaPredicted RBP9.91□□□□□ -0.82
CTHRC1-201ENST00000330295 IGHV1OR15-1A0A075B7D0 117 aa9.9□□□□□ -0.82
CTHRC1-201ENST00000330295 A0A096LPF7 62 aa9.9□□□□□ -0.82
CTHRC1-201ENST00000330295 LRCOL1A6NCL2 159 aa9.9□□□□□ -0.82
CTHRC1-201ENST00000330295 FBLL1A6NHQ2 334 aaKnown RBP9.9□□□□□ -0.82
CTHRC1-201ENST00000330295 DAZ2Q13117 558 aaKnown RBP9.9□□□□□ -0.82
CTHRC1-201ENST00000330295 SUN5Q8TC36 379 aa9.9□□□□□ -0.82
CTHRC1-201ENST00000330295 ZNF471Q9BX82 626 aaPredicted RBP9.9□□□□□ -0.82
CTHRC1-201ENST00000330295 CYTL1Q9NRR1 136 aa9.9□□□□□ -0.82
CTHRC1-201ENST00000330295 TRAV9-2A0A087WT02 112 aa9.89□□□□□ -0.83
CTHRC1-201ENST00000330295 A0A1W2PRE2 83 aa9.89□□□□□ -0.83
CTHRC1-201ENST00000330295 UMAD1C9J7I0 102 aa9.89□□□□□ -0.83
CTHRC1-201ENST00000330295 BCL2L11O43521 198 aa9.89□□□□□ -0.83
CTHRC1-201ENST00000330295 IFNA7P01567 189 aa9.89□□□□□ -0.83
CTHRC1-201ENST00000330295 PPT1P50897 306 aa9.89□□□□□ -0.83
CTHRC1-201ENST00000330295 SUMO1P63165 101 aaKnown RBP9.89□□□□□ -0.83
CTHRC1-201ENST00000330295 FAM159AQ6UWV7 190 aa9.89□□□□□ -0.83
CTHRC1-201ENST00000330295 SCXQ7RTU7 201 aa9.89□□□□□ -0.83
CTHRC1-201ENST00000330295 Q8N814 137 aa9.89□□□□□ -0.83
CTHRC1-201ENST00000330295 SEC11BP0C7V7 166 aa9.88□□□□□ -0.83
CTHRC1-201ENST00000330295 ZFP69Q49AA0 526 aa9.88□□□□□ -0.83
CTHRC1-201ENST00000330295 IBA57Q5T440 356 aaKnown RBP9.88□□□□□ -0.83
CTHRC1-201ENST00000330295 EIF5AL1Q6IS14 154 aaKnown RBP9.88□□□□□ -0.83
CTHRC1-201ENST00000330295 TREM1Q9NP99 234 aa9.88□□□□□ -0.83
CTHRC1-201ENST00000330295 TRGV2A0A075B6R0 118 aa9.87□□□□□ -0.83
CTHRC1-201ENST00000330295 TRAV21A0A0B4J279 112 aa9.87□□□□□ -0.83
CTHRC1-201ENST00000330295 GAGE12BA1L429 117 aa9.87□□□□□ -0.83
CTHRC1-201ENST00000330295 MAP1LC3B2A6NCE7 125 aa9.87□□□□□ -0.83
CTHRC1-201ENST00000330295 F6UZH7 168 aa9.87□□□□□ -0.83
CTHRC1-201ENST00000330295 GAGE7O76087 117 aa9.87□□□□□ -0.83
CTHRC1-201ENST00000330295 TCRAP04437 139 aa9.87□□□□□ -0.83
CTHRC1-201ENST00000330295 GAGE12FP0CL80 117 aa9.87□□□□□ -0.83
CTHRC1-201ENST00000330295 GAGE12GP0CL81 117 aa9.87□□□□□ -0.83
CTHRC1-201ENST00000330295 GAGE12IP0CL82 117 aa9.87□□□□□ -0.83
CTHRC1-201ENST00000330295 TPT1P13693 172 aaKnown RBP9.87□□□□□ -0.83
CTHRC1-201ENST00000330295 GNG5P63218 68 aa9.87□□□□□ -0.83
CTHRC1-201ENST00000330295 ZNF415Q09FC8 603 aa9.87□□□□□ -0.83
CTHRC1-201ENST00000330295 Q6AWC8 147 aa9.87□□□□□ -0.83
CTHRC1-201ENST00000330295 CYB561D1Q8N8Q1 229 aa9.87□□□□□ -0.83
CTHRC1-201ENST00000330295 OR11H4Q8NGC9 324 aa9.87□□□□□ -0.83
CTHRC1-201ENST00000330295 MAP1LC3BQ9GZQ8 125 aa9.87□□□□□ -0.83
CTHRC1-201ENST00000330295 GSN-AS1Q9NRJ2 163 aa9.87□□□□□ -0.83
CTHRC1-201ENST00000330295 EPDR1Q9UM22 224 aa9.87□□□□□ -0.83
CTHRC1-201ENST00000330295 TRGV11A0A075B6L2 103 aa9.86□□□□□ -0.83
CTHRC1-201ENST00000330295 TCL1AP56279 114 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms