RNA–Protein interactions for RNA: ENST00000327367.8

SMAD3-201, Transcript of SMAD family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD3, Length 6,247 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-201ENST00000327367 APC2O95996 2303 aa12.96□□□□□ -0.33
SMAD3-201ENST00000327367 LGALS9O00182 355 aa12.96□□□□□ -0.33
SMAD3-201ENST00000327367 CFPP27918 469 aa12.96□□□□□ -0.33
SMAD3-201ENST00000327367 TRAV23DV6A0A075B6W5 121 aa12.96□□□□□ -0.33
SMAD3-201ENST00000327367 CGB7P0DN87 165 aa12.96□□□□□ -0.33
SMAD3-201ENST00000327367 ZFP36L1Q07352 338 aaKnown RBP12.96□□□□□ -0.33
SMAD3-201ENST00000327367 TP73-AS1Q9UF72 201 aa12.96□□□□□ -0.33
SMAD3-201ENST00000327367 A0A0J9YXV3 536 aa12.95□□□□□ -0.34
SMAD3-201ENST00000327367 E7EQL1 145 aa12.95□□□□□ -0.34
SMAD3-201ENST00000327367 RPL39P62891 51 aaKnown RBP12.95□□□□□ -0.34
SMAD3-201ENST00000327367 SND1-IT1Q9HBX3 110 aa12.95□□□□□ -0.34
SMAD3-201ENST00000327367 LINC01619G3V211 115 aa12.95□□□□□ -0.34
SMAD3-201ENST00000327367 NOP10Q9NPE3 64 aaKnown RBP12.95□□□□□ -0.34
SMAD3-201ENST00000327367 CASP8AP2Q9UKL3 1982 aa12.95□□□□□ -0.34
SMAD3-201ENST00000327367 IGLV10-54A0A075B6I4 117 aa12.95□□□□□ -0.34
SMAD3-201ENST00000327367 IGKV1OR2-108A0A075B7D4 117 aa12.95□□□□□ -0.34
SMAD3-201ENST00000327367 ZNF503-AS2A6NEH8 195 aa12.95□□□□□ -0.34
SMAD3-201ENST00000327367 IGLV3-19P01714 112 aa12.95□□□□□ -0.34
SMAD3-201ENST00000327367 FOXL2NBQ6ZUU3 175 aa12.95□□□□□ -0.34
SMAD3-201ENST00000327367 MLST8Q9BVC4 326 aa12.95□□□□□ -0.34
SMAD3-201ENST00000327367 Q9HAA7 133 aa12.95□□□□□ -0.34
SMAD3-201ENST00000327367 RPL18AQ02543 176 aaKnown RBP12.95□□□□□ -0.34
SMAD3-201ENST00000327367 K7EM74 188 aa12.94□□□□□ -0.34
SMAD3-201ENST00000327367 SRSF2Q01130 221 aaKnown RBP12.94□□□□□ -0.34
SMAD3-201ENST00000327367 RNF166Q96A37 237 aaPredicted RBP12.94□□□□□ -0.34
SMAD3-201ENST00000327367 VSIG2Q96IQ7 327 aa12.94□□□□□ -0.34
SMAD3-201ENST00000327367 IGLV2-23P01705 113 aa12.94□□□□□ -0.34
SMAD3-201ENST00000327367 PRR20EP86478 221 aa12.94□□□□□ -0.34
SMAD3-201ENST00000327367 PRR20CP86479 221 aa12.94□□□□□ -0.34
SMAD3-201ENST00000327367 PRR20DP86480 221 aa12.94□□□□□ -0.34
SMAD3-201ENST00000327367 PRR20BP86481 221 aa12.94□□□□□ -0.34
SMAD3-201ENST00000327367 PRR20AP86496 221 aa12.94□□□□□ -0.34
SMAD3-201ENST00000327367 MRPL53Q96EL3 112 aaKnown RBP12.94□□□□□ -0.34
SMAD3-201ENST00000327367 B4DSR2 109 aa12.93□□□□□ -0.34
SMAD3-201ENST00000327367 COA6Q5JTJ3 125 aaKnown RBP12.93□□□□□ -0.34
SMAD3-201ENST00000327367 ZNF524Q96C55 264 aa12.93□□□□□ -0.34
SMAD3-201ENST00000327367 NREPQ16612 68 aa12.93□□□□□ -0.34
SMAD3-201ENST00000327367 MP68P56378 58 aa12.93□□□□□ -0.34
SMAD3-201ENST00000327367 Q6ZUT4 128 aa12.93□□□□□ -0.34
SMAD3-201ENST00000327367 AGPAT4-IT1Q9H0P7 198 aa12.92□□□□□ -0.34
SMAD3-201ENST00000327367 C15orf65H3BRN8 121 aa12.92□□□□□ -0.34
SMAD3-201ENST00000327367 LECT2O14960 151 aa12.92□□□□□ -0.34
SMAD3-201ENST00000327367 LHBP01229 141 aa12.92□□□□□ -0.34
SMAD3-201ENST00000327367 TRPM7Q96QT4 1865 aa12.92□□□□□ -0.34
SMAD3-201ENST00000327367 TRBV10-2A0A0K0K1G8 114 aa12.92□□□□□ -0.34
SMAD3-201ENST00000327367 FUSP35637 526 aaKnown RBP eCLIP12.92□□□□□ -0.344e-6■■□□□ 13.9
SMAD3-201ENST00000327367 NDUFV3P56181 108 aaKnown RBP12.92□□□□□ -0.34
SMAD3-201ENST00000327367 SPATA12Q7Z6I5 190 aa12.92□□□□□ -0.34
SMAD3-201ENST00000327367 ZNF491Q8N8L2 437 aa12.92□□□□□ -0.34
SMAD3-201ENST00000327367 RALGAPA2Q2PPJ7 1873 aa12.92□□□□□ -0.34
SMAD3-201ENST00000327367 IGKV2D-24A0A075B6R9 120 aa12.91□□□□□ -0.34
SMAD3-201ENST00000327367 MRPL55Q7Z7F7 128 aaKnown RBP12.91□□□□□ -0.34
SMAD3-201ENST00000327367 HIST2H2BCQ6DN03 193 aa12.91□□□□□ -0.34
SMAD3-201ENST00000327367 INTS1Q8N201 2190 aaKnown RBP12.91□□□□□ -0.34
SMAD3-201ENST00000327367 TCL1BO95988 128 aa12.91□□□□□ -0.34
SMAD3-201ENST00000327367 LMO1P25800 156 aa12.91□□□□□ -0.34
SMAD3-201ENST00000327367 GTSF1Q8WW33 167 aa12.91□□□□□ -0.34
SMAD3-201ENST00000327367 NCOR1O75376 2440 aa12.9□□□□□ -0.34
SMAD3-201ENST00000327367 CEP290O15078 2479 aa12.9□□□□□ -0.34
SMAD3-201ENST00000327367 TNRC6AQ8NDV7 1962 aaKnown RBP12.9□□□□□ -0.34
SMAD3-201ENST00000327367 GATA4P43694 442 aa12.9□□□□□ -0.34
SMAD3-201ENST00000327367 IL15RAQ13261 267 aa12.9□□□□□ -0.34
SMAD3-201ENST00000327367 RHOHQ15669 191 aa12.9□□□□□ -0.34
SMAD3-201ENST00000327367 NDUFA4O00483 81 aa12.9□□□□□ -0.34
SMAD3-201ENST00000327367 SDIM1Q6ZPB5 146 aa12.9□□□□□ -0.34
SMAD3-201ENST00000327367 LCTP09848 1927 aa12.9□□□□□ -0.35
SMAD3-201ENST00000327367 BRCA1P38398 1863 aaKnown RBP12.89□□□□□ -0.35
SMAD3-201ENST00000327367 ZNF883P0CG24 379 aa12.89□□□□□ -0.35
SMAD3-201ENST00000327367 IGKV2D-26A0A0A0MRZ7 120 aa12.89□□□□□ -0.35
SMAD3-201ENST00000327367 BUB3O43684 328 aa12.89□□□□□ -0.35
SMAD3-201ENST00000327367 GNLYP22749 145 aa12.89□□□□□ -0.35
SMAD3-201ENST00000327367 PLXNA1Q9UIW2 1896 aa12.89□□□□□ -0.35
SMAD3-201ENST00000327367 TIMM17AQ99595 171 aa12.89□□□□□ -0.35
SMAD3-201ENST00000327367 C22orf46C9J442 243 aa12.88□□□□□ -0.35
SMAD3-201ENST00000327367 IGHV4OR15-8A0A075B7B6 117 aa12.88□□□□□ -0.35
SMAD3-201ENST00000327367 A0A087WW49 117 aa12.88□□□□□ -0.35
SMAD3-201ENST00000327367 PLA2G5P39877 138 aa12.88□□□□□ -0.35
SMAD3-201ENST00000327367 COL11A2P13942 1736 aaPredicted RBP12.88□□□□□ -0.35
SMAD3-201ENST00000327367 IGHV7-4-1A0A0J9YVY3 117 aa12.87□□□□□ -0.35
SMAD3-201ENST00000327367 ETDCA0A1B0GVM5 59 aa12.87□□□□□ -0.35
SMAD3-201ENST00000327367 NPBQ8NG41 125 aa12.87□□□□□ -0.35
SMAD3-201ENST00000327367 UBE2E1P51965 193 aa12.86□□□□□ -0.35
SMAD3-201ENST00000327367 RNF152Q8N8N0 203 aa12.86□□□□□ -0.35
SMAD3-201ENST00000327367 PROP1O75360 226 aa12.86□□□□□ -0.35
SMAD3-201ENST00000327367 LOXP28300 417 aaPredicted RBP12.86□□□□□ -0.35
SMAD3-201ENST00000327367 TEX49A0A1B0GTD5 131 aa12.86□□□□□ -0.35
SMAD3-201ENST00000327367 APRG1Q8IVJ8 170 aa12.86□□□□□ -0.35
SMAD3-201ENST00000327367 C20orf197Q8N268 126 aa12.86□□□□□ -0.35
SMAD3-201ENST00000327367 OPRPNQ99935 248 aaPredicted RBP12.86□□□□□ -0.35
SMAD3-201ENST00000327367 V9GYY9 64 aa12.86□□□□□ -0.35
SMAD3-201ENST00000327367 TNRC6BQ9UPQ9 1833 aaKnown RBP12.86□□□□□ -0.35
SMAD3-201ENST00000327367 ANK1P16157 1881 aa12.86□□□□□ -0.35
SMAD3-201ENST00000327367 WI2-2373I1.2A0A1W2PRP0 233 aa12.86□□□□□ -0.35
SMAD3-201ENST00000327367 RNF223E7ERA6 249 aa12.86□□□□□ -0.35
SMAD3-201ENST00000327367 TRBV12-3P01733 135 aa12.86□□□□□ -0.35
SMAD3-201ENST00000327367 WFDC11Q8NEX6 87 aa12.86□□□□□ -0.35
SMAD3-201ENST00000327367 C10orf105Q8TEF2 133 aa12.85□□□□□ -0.35
SMAD3-201ENST00000327367 UPK3BQ9BT76 320 aa12.85□□□□□ -0.35
SMAD3-201ENST00000327367 LINC01356Q8N9X3 169 aa12.85□□□□□ -0.35
SMAD3-201ENST00000327367 IGLC6P0CF74 106 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms