RNA–Protein interactions for RNA: ENST00000327154.10

RPAIN-201, Transcript of RPA interacting protein, humanhuman

TSL 2 BASIC

Gene RPAIN, Length 815 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-201ENST00000327154 UMAD1C9J7I0 102 aa9.72□□□□□ -0.85
RPAIN-201ENST00000327154 PAX4O43316 350 aa9.72□□□□□ -0.85
RPAIN-201ENST00000327154 UBE2G2P60604 165 aa9.72□□□□□ -0.85
RPAIN-201ENST00000327154 GNG5P63218 68 aa9.72□□□□□ -0.85
RPAIN-201ENST00000327154 SPATA12Q7Z6I5 190 aa9.72□□□□□ -0.85
RPAIN-201ENST00000327154 STOML3Q8TAV4 291 aa9.72□□□□□ -0.85
RPAIN-201ENST00000327154 MUC4Q99102 2169 aa9.71□□□□□ -0.85
RPAIN-201ENST00000327154 RBAKDNA6NC62 111 aa9.71□□□□□ -0.86
RPAIN-201ENST00000327154 MUC21Q5SSG8 566 aa9.71□□□□□ -0.86
RPAIN-201ENST00000327154 GOLT1AQ6ZVE7 132 aa9.71□□□□□ -0.86
RPAIN-201ENST00000327154 SUN5Q8TC36 379 aa9.71□□□□□ -0.86
RPAIN-201ENST00000327154 A0A1B0GV50 99 aa9.7□□□□□ -0.86
RPAIN-201ENST00000327154 GGTLC3B5MD39 225 aa9.7□□□□□ -0.86
RPAIN-201ENST00000327154 SUMO1P63165 101 aaKnown RBP9.7□□□□□ -0.86
RPAIN-201ENST00000327154 FHL2Q14192 279 aa9.7□□□□□ -0.86
RPAIN-201ENST00000327154 C9orf62Q8N4C0 152 aa9.7□□□□□ -0.86
RPAIN-201ENST00000327154 C5orf17Q8NAS9 161 aa9.7□□□□□ -0.86
RPAIN-201ENST00000327154 C8orf49Q96NF6 230 aa9.7□□□□□ -0.86
RPAIN-201ENST00000327154 MDFICQ9P1T7 246 aa9.7□□□□□ -0.86
RPAIN-201ENST00000327154 PRO0255Q9UI72 69 aa9.7□□□□□ -0.86
RPAIN-201ENST00000327154 HHLA3Q9XRX5 114 aa9.7□□□□□ -0.86
RPAIN-201ENST00000327154 ICOSQ9Y6W8 199 aa9.7□□□□□ -0.86
RPAIN-201ENST00000327154 CDK2AP2O75956 126 aa9.69□□□□□ -0.86
RPAIN-201ENST00000327154 CRYBA4P53673 196 aa9.69□□□□□ -0.86
RPAIN-201ENST00000327154 ZNF415Q09FC8 603 aa9.69□□□□□ -0.86
RPAIN-201ENST00000327154 SLAQ13239 276 aa9.69□□□□□ -0.86
RPAIN-201ENST00000327154 SLC51BQ86UW2 128 aa9.69□□□□□ -0.86
RPAIN-201ENST00000327154 SFT2D1Q8WV19 159 aa9.69□□□□□ -0.86
RPAIN-201ENST00000327154 RYR1P21817 5038 aa9.69□□□□□ -0.86
RPAIN-201ENST00000327154 TRAV8-1A0A0A6YYK1 113 aa9.68□□□□□ -0.86
RPAIN-201ENST00000327154 A0A1W2PRE2 83 aa9.68□□□□□ -0.86
RPAIN-201ENST00000327154 SIVA1O15304 175 aa9.68□□□□□ -0.86
RPAIN-201ENST00000327154 NXPH4O95158 308 aa9.68□□□□□ -0.86
RPAIN-201ENST00000327154 BTF3P20290 206 aaKnown RBP9.68□□□□□ -0.86
RPAIN-201ENST00000327154 KRTAP10-2P60368 255 aa9.68□□□□□ -0.86
RPAIN-201ENST00000327154 EIF5AL1Q6IS14 154 aaKnown RBP9.68□□□□□ -0.86
RPAIN-201ENST00000327154 DPPA3Q6W0C5 159 aa9.68□□□□□ -0.86
RPAIN-201ENST00000327154 ARL6IP6Q8N6S5 226 aa9.68□□□□□ -0.86
RPAIN-201ENST00000327154 SGK494Q96LW2 274 aa9.68□□□□□ -0.86
RPAIN-201ENST00000327154 TRGV4A0A0C4DH28 118 aa9.67□□□□□ -0.86
RPAIN-201ENST00000327154 K7EQM0 130 aa9.67□□□□□ -0.86
RPAIN-201ENST00000327154 IFNA7P01567 189 aa9.67□□□□□ -0.86
RPAIN-201ENST00000327154 TCRAP04437 139 aa9.67□□□□□ -0.86
RPAIN-201ENST00000327154 H2AFB1P0C5Y9 115 aa9.67□□□□□ -0.86
RPAIN-201ENST00000327154 SFTA3P0C7M3 94 aa9.67□□□□□ -0.86
RPAIN-201ENST00000327154 NKX2-5P52952 324 aaPredicted RBP9.67□□□□□ -0.86
RPAIN-201ENST00000327154 LINC00315P59091 139 aa9.67□□□□□ -0.86
RPAIN-201ENST00000327154 MRPL23Q16540 153 aaKnown RBP9.67□□□□□ -0.86
RPAIN-201ENST00000327154 TMEM183BQ1AE95 376 aa9.67□□□□□ -0.86
RPAIN-201ENST00000327154 Q6AWC8 147 aa9.67□□□□□ -0.86
RPAIN-201ENST00000327154 LYPD5Q6UWN5 251 aa9.67□□□□□ -0.86
RPAIN-201ENST00000327154 FAM159AQ6UWV7 190 aa9.67□□□□□ -0.86
RPAIN-201ENST00000327154 TMEM183AQ8IXX5 376 aa9.67□□□□□ -0.86
RPAIN-201ENST00000327154 LENEPQ9Y5L5 61 aa9.67□□□□□ -0.86
RPAIN-201ENST00000327154 SERTM2A0A1B0GWG4 89 aa9.66□□□□□ -0.86
RPAIN-201ENST00000327154 FAM74A7A6NL05 159 aa9.66□□□□□ -0.86
RPAIN-201ENST00000327154 NEGR1Q7Z3B1 354 aa9.66□□□□□ -0.86
RPAIN-201ENST00000327154 MAPKAPK5-AS1Q8N8E1 139 aa9.66□□□□□ -0.86
RPAIN-201ENST00000327154 CYB561D1Q8N8Q1 229 aa9.66□□□□□ -0.86
RPAIN-201ENST00000327154 MBD3L1Q8WWY6 194 aa9.66□□□□□ -0.86
RPAIN-201ENST00000327154 RASL10AQ92737 203 aa9.66□□□□□ -0.86
RPAIN-201ENST00000327154 ZNF479Q96JC4 524 aa9.66□□□□□ -0.86
RPAIN-201ENST00000327154 NAGKQ9UJ70 344 aa9.66□□□□□ -0.86
RPAIN-201ENST00000327154 EPDR1Q9UM22 224 aa9.66□□□□□ -0.86
RPAIN-201ENST00000327154 TRGV11A0A075B6L2 103 aa9.65□□□□□ -0.86
RPAIN-201ENST00000327154 F6UZH7 168 aa9.65□□□□□ -0.86
RPAIN-201ENST00000327154 GNRH2O43555 120 aa9.65□□□□□ -0.86
RPAIN-201ENST00000327154 CST9LP1Q5W188 147 aa9.65□□□□□ -0.86
RPAIN-201ENST00000327154 Q6ZRN7 208 aaPredicted RBP9.65□□□□□ -0.86
RPAIN-201ENST00000327154 SPXQ9BT56 116 aa9.65□□□□□ -0.86
RPAIN-201ENST00000327154 NDFIP1Q9BT67 221 aa9.65□□□□□ -0.86
RPAIN-201ENST00000327154 TNFRSF18Q9Y5U5 241 aa9.65□□□□□ -0.86
RPAIN-201ENST00000327154 PEX7O00628 323 aa9.64□□□□□ -0.87
RPAIN-201ENST00000327154 PAGE4O60829 102 aa9.64□□□□□ -0.87
RPAIN-201ENST00000327154 SULT1A2P50226 295 aa9.64□□□□□ -0.87
RPAIN-201ENST00000327154 RAB5CP51148 216 aa9.64□□□□□ -0.87
RPAIN-201ENST00000327154 FLI1Q01543 452 aaPredicted RBP9.64□□□□□ -0.87
RPAIN-201ENST00000327154 PRNTQ86SH4 94 aa9.64□□□□□ -0.87
RPAIN-201ENST00000327154 NKX6-2Q9C056 277 aaPredicted RBP9.64□□□□□ -0.87
RPAIN-201ENST00000327154 TREM1Q9NP99 234 aa9.64□□□□□ -0.87
RPAIN-201ENST00000327154 PSG8Q9UQ74 426 aa9.64□□□□□ -0.87
RPAIN-201ENST00000327154 ABCA13Q86UQ4 5058 aa9.64□□□□□ -0.87
RPAIN-201ENST00000327154 TRAV34A0A0B4J273 112 aa9.63□□□□□ -0.87
RPAIN-201ENST00000327154 K7EQD1 137 aa9.63□□□□□ -0.87
RPAIN-201ENST00000327154 GYPEP15421 78 aa9.63□□□□□ -0.87
RPAIN-201ENST00000327154 TDRG1Q3Y452 100 aa9.63□□□□□ -0.87
RPAIN-201ENST00000327154 TMEM75Q8N9X5 138 aa9.63□□□□□ -0.87
RPAIN-201ENST00000327154 TVP23CQ96ET8 276 aa9.63□□□□□ -0.87
RPAIN-201ENST00000327154 LINC00479Q96M42 142 aa9.63□□□□□ -0.87
RPAIN-201ENST00000327154 TRAV21A0A0B4J279 112 aa9.62□□□□□ -0.87
RPAIN-201ENST00000327154 IGHV3-16A0A0C4DH30 117 aa9.62□□□□□ -0.87
RPAIN-201ENST00000327154 IGLV2-11P01706 119 aa9.62□□□□□ -0.87
RPAIN-201ENST00000327154 SRIP30626 198 aa9.62□□□□□ -0.87
RPAIN-201ENST00000327154 PPT1P50897 306 aa9.62□□□□□ -0.87
RPAIN-201ENST00000327154 ALKAL2Q6UX46 152 aa9.62□□□□□ -0.87
RPAIN-201ENST00000327154 PCNPQ8WW12 178 aaKnown RBP9.62□□□□□ -0.87
RPAIN-201ENST00000327154 HIST1H2BAQ96A08 127 aa9.62□□□□□ -0.87
RPAIN-201ENST00000327154 BOLA1Q9Y3E2 137 aa9.62□□□□□ -0.87
RPAIN-201ENST00000327154 ARL2-SNX15V9GYD0 113 aa9.62□□□□□ -0.87
RPAIN-201ENST00000327154 TRAV9-2A0A087WT02 112 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms