RNA–Protein interactions for RNA: ENST00000326956.11

SSBP3-201, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 2

Gene SSBP3, Length 2,913 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-201ENST00000326956 GAGE12HA6NDE8 117 aa11.21□□□□□ -0.61
SSBP3-201ENST00000326956 SH2D6Q7Z4S9 175 aa11.21□□□□□ -0.61
SSBP3-201ENST00000326956 MSRB2Q9Y3D2 182 aa11.21□□□□□ -0.61
SSBP3-201ENST00000326956 MYMXA0A1B0GTQ4 84 aa11.21□□□□□ -0.62
SSBP3-201ENST00000326956 RRN3P1Q2M238 152 aa11.21□□□□□ -0.62
SSBP3-201ENST00000326956 MRPL53Q96EL3 112 aaKnown RBP11.21□□□□□ -0.62
SSBP3-201ENST00000326956 CYSLTR1Q9Y271 337 aa11.21□□□□□ -0.62
SSBP3-201ENST00000326956 RAXQ9Y2V3 346 aa11.21□□□□□ -0.62
SSBP3-201ENST00000326956 TLN1Q9Y490 2541 aaKnown RBP11.21□□□□□ -0.62
SSBP3-201ENST00000326956 PSMG3-AS1Q96PY0 264 aa11.2□□□□□ -0.62
SSBP3-201ENST00000326956 TRAV12-1A0A0B4J245 112 aa11.2□□□□□ -0.62
SSBP3-201ENST00000326956 SCGB1D4Q6XE38 83 aa11.2□□□□□ -0.62
SSBP3-201ENST00000326956 C9orf47Q6ZRZ4 202 aa11.2□□□□□ -0.62
SSBP3-201ENST00000326956 MTURNQ8N3F0 131 aa11.2□□□□□ -0.62
SSBP3-201ENST00000326956 TRAV8-2A0A0B4J237 113 aa11.19□□□□□ -0.62
SSBP3-201ENST00000326956 G3V318 75 aa11.19□□□□□ -0.62
SSBP3-201ENST00000326956 HOXA3O43365 443 aaPredicted RBP11.19□□□□□ -0.62
SSBP3-201ENST00000326956 CLPSL1A2RUU4 121 aa11.19□□□□□ -0.62
SSBP3-201ENST00000326956 MGPP08493 103 aa11.19□□□□□ -0.62
SSBP3-201ENST00000326956 SUMO2P61956 95 aaKnown RBP11.19□□□□□ -0.62
SSBP3-201ENST00000326956 CCDC140Q96MF4 163 aa11.19□□□□□ -0.62
SSBP3-201ENST00000326956 ZFHX2Q9C0A1 2572 aaPredicted RBP11.19□□□□□ -0.62
SSBP3-201ENST00000326956 A0A1B0GWB2 263 aa11.19□□□□□ -0.62
SSBP3-201ENST00000326956 SCGB1A1P11684 91 aa11.19□□□□□ -0.62
SSBP3-201ENST00000326956 Q6ZQT7 251 aa11.19□□□□□ -0.62
SSBP3-201ENST00000326956 PHLDA3Q9Y5J5 127 aa11.19□□□□□ -0.62
SSBP3-201ENST00000326956 IGHV4-4A0A075B6R2 117 aa11.18□□□□□ -0.62
SSBP3-201ENST00000326956 CCL21O00585 134 aa11.18□□□□□ -0.62
SSBP3-201ENST00000326956 SRSF9Q13242 221 aaKnown RBP eCLIP11.18□□□□□ -0.62
SSBP3-201ENST00000326956 TRBV7-3A0A075B6L6 115 aa11.18□□□□□ -0.62
SSBP3-201ENST00000326956 TRBV7-1A0A0A6YYK4 115 aa11.18□□□□□ -0.62
SSBP3-201ENST00000326956 MRPL16Q9NX20 251 aaKnown RBP11.18□□□□□ -0.62
SSBP3-201ENST00000326956 ATP5G2Q06055 141 aa11.17□□□□□ -0.62
SSBP3-201ENST00000326956 SPAG8Q99932 426 aaPredicted RBP11.17□□□□□ -0.62
SSBP3-201ENST00000326956 AKAP13Q12802 2813 aa11.17□□□□□ -0.62
SSBP3-201ENST00000326956 LCNL1Q6ZST4 164 aa11.17□□□□□ -0.62
SSBP3-201ENST00000326956 OR10J6PQ8NGY7 276 aa11.17□□□□□ -0.62
SSBP3-201ENST00000326956 TOMM6Q96B49 74 aa11.17□□□□□ -0.62
SSBP3-201ENST00000326956 DPH3P1Q9H4G8 78 aa11.17□□□□□ -0.62
SSBP3-201ENST00000326956 SLC25A16P16260 332 aa11.16□□□□□ -0.62
SSBP3-201ENST00000326956 ASIPP42127 132 aa11.16□□□□□ -0.62
SSBP3-201ENST00000326956 C14orf178Q8N769 122 aaPredicted RBP11.16□□□□□ -0.62
SSBP3-201ENST00000326956 PGPEP1Q9NXJ5 209 aa11.16□□□□□ -0.62
SSBP3-201ENST00000326956 TRAV21A0A0B4J279 112 aa11.16□□□□□ -0.62
SSBP3-201ENST00000326956 ZNF815PA8K554 130 aa11.16□□□□□ -0.62
SSBP3-201ENST00000326956 ZFP36P26651 326 aaKnown RBP11.16□□□□□ -0.62
SSBP3-201ENST00000326956 C2orf66Q6UXQ4 117 aa11.16□□□□□ -0.62
SSBP3-201ENST00000326956 C9orf139Q6ZV77 190 aa11.16□□□□□ -0.62
SSBP3-201ENST00000326956 C20orf78Q9BR46 151 aa11.16□□□□□ -0.62
SSBP3-201ENST00000326956 SPRY2O43597 315 aa11.15□□□□□ -0.62
SSBP3-201ENST00000326956 PRADC1Q9BSG0 188 aa11.15□□□□□ -0.62
SSBP3-201ENST00000326956 LINC01619G3V211 115 aa11.15□□□□□ -0.62
SSBP3-201ENST00000326956 RPL39LQ96EH5 51 aaKnown RBP11.15□□□□□ -0.62
SSBP3-201ENST00000326956 CLUHP3Q96NS8 147 aa11.15□□□□□ -0.62
SSBP3-201ENST00000326956 LENEPQ9Y5L5 61 aa11.15□□□□□ -0.62
SSBP3-201ENST00000326956 LOC107984156A0A0G2JMH3 177 aa11.15□□□□□ -0.63
SSBP3-201ENST00000326956 A0A1B0GV72 72 aa11.15□□□□□ -0.63
SSBP3-201ENST00000326956 APOMO95445 188 aa11.15□□□□□ -0.63
SSBP3-201ENST00000326956 LGALS1P09382 135 aaKnown RBP11.15□□□□□ -0.63
SSBP3-201ENST00000326956 FBXL19-AS1Q494R0 122 aa11.15□□□□□ -0.63
SSBP3-201ENST00000326956 ARL17AQ8IVW1 177 aa11.15□□□□□ -0.63
SSBP3-201ENST00000326956 NEXN-AS1Q8NBZ9 246 aa11.15□□□□□ -0.63
SSBP3-201ENST00000326956 RASL10AQ92737 203 aa11.15□□□□□ -0.63
SSBP3-201ENST00000326956 RPL11P62913 178 aaKnown RBP11.14□□□□□ -0.63
SSBP3-201ENST00000326956 PRR9Q5T870 116 aa11.14□□□□□ -0.63
SSBP3-201ENST00000326956 LINC00477Q96M19 166 aa11.14□□□□□ -0.63
SSBP3-201ENST00000326956 LINC01548A6NM66 108 aa11.14□□□□□ -0.63
SSBP3-201ENST00000326956 SAA4P35542 130 aa11.14□□□□□ -0.63
SSBP3-201ENST00000326956 UBE2E1P51965 193 aa11.14□□□□□ -0.63
SSBP3-201ENST00000326956 ATMQ13315 3056 aa11.14□□□□□ -0.63
SSBP3-201ENST00000326956 PRSS29PA6NIE9 313 aa11.13□□□□□ -0.63
SSBP3-201ENST00000326956 BAALCQ8WXS3 180 aa11.13□□□□□ -0.63
SSBP3-201ENST00000326956 SIRPDQ9H106 197 aa11.13□□□□□ -0.63
SSBP3-201ENST00000326956 IGF1P05019 195 aa11.13□□□□□ -0.63
SSBP3-201ENST00000326956 SPATA25Q9BR10 227 aa11.13□□□□□ -0.63
SSBP3-201ENST00000326956 ZNF292O60281 2723 aa11.13□□□□□ -0.63
SSBP3-201ENST00000326956 PPP1R17O96001 155 aa11.12□□□□□ -0.63
SSBP3-201ENST00000326956 DLX4Q92988 240 aaPredicted RBP11.12□□□□□ -0.63
SSBP3-201ENST00000326956 LINC01549A6NIU2 74 aa11.12□□□□□ -0.63
SSBP3-201ENST00000326956 HERVK_113P61574 105 aa11.12□□□□□ -0.63
SSBP3-201ENST00000326956 SFTA2Q6UW10 78 aa11.12□□□□□ -0.63
SSBP3-201ENST00000326956 OVOL1O14753 267 aa11.12□□□□□ -0.63
SSBP3-201ENST00000326956 RNASE4P34096 147 aaKnown RBP11.12□□□□□ -0.63
SSBP3-201ENST00000326956 ARL3P36405 182 aa11.12□□□□□ -0.63
SSBP3-201ENST00000326956 ANXA2RQ3ZCQ2 193 aa11.12□□□□□ -0.63
SSBP3-201ENST00000326956 LYRM7Q5U5X0 104 aa11.12□□□□□ -0.63
SSBP3-201ENST00000326956 U3KQE9 123 aa11.12□□□□□ -0.63
SSBP3-201ENST00000326956 PSMB2P49721 201 aa11.11□□□□□ -0.63
SSBP3-201ENST00000326956 C11orf71Q6IPW1 123 aa11.11□□□□□ -0.63
SSBP3-201ENST00000326956 LINC00527Q9UJ94 153 aa11.11□□□□□ -0.63
SSBP3-201ENST00000326956 C20orf173Q96LM9 149 aa11.11□□□□□ -0.63
SSBP3-201ENST00000326956 CENPVL3A0A0U1RRI6 287 aa11.1□□□□□ -0.63
SSBP3-201ENST00000326956 INSL3P51460 131 aa11.1□□□□□ -0.63
SSBP3-201ENST00000326956 MORN3Q6PF18 240 aaPredicted RBP11.1□□□□□ -0.63
SSBP3-201ENST00000326956 GLMPQ8WWB7 406 aa11.1□□□□□ -0.63
SSBP3-201ENST00000326956 ATP6V0BQ99437 205 aa11.1□□□□□ -0.63
SSBP3-201ENST00000326956 PRO0461Q9UI25 63 aa11.1□□□□□ -0.63
SSBP3-201ENST00000326956 PTPRQQ9UMZ3 2332 aa11.1□□□□□ -0.63
SSBP3-201ENST00000326956 ZFAND2AQ8N6M9 145 aa11.1□□□□□ -0.63
SSBP3-201ENST00000326956 LRBAP50851 2863 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 93.8 ms