RNA–Protein interactions for RNA: ENST00000324501.9

PSEN1-201, Transcript of presenilin 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PSEN1, Length 6,078 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-201ENST00000324501 LINC00158P58513 81 aa5.67□□□□□ -1.5
PSEN1-201ENST00000324501 Q6ZPA2 131 aa5.67□□□□□ -1.5
PSEN1-201ENST00000324501 CFHR4Q92496 578 aa5.67□□□□□ -1.5
PSEN1-201ENST00000324501 PCNX3Q9H6A9 2034 aa5.67□□□□□ -1.5
PSEN1-201ENST00000324501 VCYO14598 125 aa5.67□□□□□ -1.5
PSEN1-201ENST00000324501 PSCAO43653 123 aa5.67□□□□□ -1.5
PSEN1-201ENST00000324501 PRR20EP86478 221 aa5.67□□□□□ -1.5
PSEN1-201ENST00000324501 PRR20CP86479 221 aa5.67□□□□□ -1.5
PSEN1-201ENST00000324501 PRR20DP86480 221 aa5.67□□□□□ -1.5
PSEN1-201ENST00000324501 PRR20BP86481 221 aa5.67□□□□□ -1.5
PSEN1-201ENST00000324501 PRR20AP86496 221 aa5.67□□□□□ -1.5
PSEN1-201ENST00000324501 GTF3C1Q12789 2109 aa5.67□□□□□ -1.5
PSEN1-201ENST00000324501 SLAQ13239 276 aa5.67□□□□□ -1.5
PSEN1-201ENST00000324501 SMPXQ9UHP9 88 aa5.67□□□□□ -1.5
PSEN1-201ENST00000324501 TRBV7-9A0A0J9YWB2 115 aa5.66□□□□□ -1.5
PSEN1-201ENST00000324501 A0A1B0GV72 72 aa5.66□□□□□ -1.5
PSEN1-201ENST00000324501 TEX22C9J3V5 150 aa5.66□□□□□ -1.5
PSEN1-201ENST00000324501 TYMSP04818 313 aa5.66□□□□□ -1.5
PSEN1-201ENST00000324501 WIPF2Q8TF74 440 aaPredicted RBP5.66□□□□□ -1.5
PSEN1-201ENST00000324501 CRIP3Q6Q6R5 217 aa5.66□□□□□ -1.5
PSEN1-201ENST00000324501 TEX43Q6ZNM6 134 aa5.66□□□□□ -1.5
PSEN1-201ENST00000324501 NOP10Q9NPE3 64 aaKnown RBP5.66□□□□□ -1.5
PSEN1-201ENST00000324501 IGLV11-55A0A075B6I3 123 aa5.66□□□□□ -1.5
PSEN1-201ENST00000324501 A0A0J9YY99 117 aa5.66□□□□□ -1.5
PSEN1-201ENST00000324501 UBE2CO00762 179 aa5.66□□□□□ -1.5
PSEN1-201ENST00000324501 IL15RAQ13261 267 aa5.66□□□□□ -1.5
PSEN1-201ENST00000324501 IGHV4-31P0DP07 118 aa5.66□□□□□ -1.5
PSEN1-201ENST00000324501 V9GYV3 84 aa5.66□□□□□ -1.5
PSEN1-201ENST00000324501 DNAJC9-AS1A6NH13 148 aa5.66□□□□□ -1.5
PSEN1-201ENST00000324501 CLPSL2Q6UWE3 100 aa5.66□□□□□ -1.5
PSEN1-201ENST00000324501 PRSS46E5RG02 174 aa5.65□□□□□ -1.5
PSEN1-201ENST00000324501 CKS1BP61024 79 aa5.65□□□□□ -1.5
PSEN1-201ENST00000324501 RNASE13Q5GAN3 156 aaKnown RBP5.65□□□□□ -1.5
PSEN1-201ENST00000324501 SPXQ9BT56 116 aa5.65□□□□□ -1.5
PSEN1-201ENST00000324501 GFRA4Q9GZZ7 299 aa5.65□□□□□ -1.5
PSEN1-201ENST00000324501 ZNF492Q9P255 531 aa5.65□□□□□ -1.5
PSEN1-201ENST00000324501 MRPS16Q9Y3D3 137 aaKnown RBP5.65□□□□□ -1.5
PSEN1-201ENST00000324501 K7ERU9 68 aa5.65□□□□□ -1.5
PSEN1-201ENST00000324501 GHRHP01286 108 aa5.65□□□□□ -1.5
PSEN1-201ENST00000324501 RASL11AQ6T310 242 aa5.65□□□□□ -1.5
PSEN1-201ENST00000324501 ZNRF2Q8NHG8 242 aa5.65□□□□□ -1.5
PSEN1-201ENST00000324501 MRPL36Q9P0J6 103 aaKnown RBP5.65□□□□□ -1.5
PSEN1-201ENST00000324501 BOD1L1Q8NFC6 3051 aa5.65□□□□□ -1.5
PSEN1-201ENST00000324501 IGLV1-47P01700 117 aa5.65□□□□□ -1.5
PSEN1-201ENST00000324501 CTSGP08311 255 aa5.65□□□□□ -1.5
PSEN1-201ENST00000324501 MRPL51Q4U2R6 128 aaKnown RBP5.65□□□□□ -1.5
PSEN1-201ENST00000324501 MORN3Q6PF18 240 aaPredicted RBP5.65□□□□□ -1.5
PSEN1-201ENST00000324501 CITED2Q99967 270 aaPredicted RBP5.65□□□□□ -1.5
PSEN1-201ENST00000324501 NHP2Q9NX24 153 aaKnown RBP5.65□□□□□ -1.5
PSEN1-201ENST00000324501 LMO4P61968 165 aa5.65□□□□□ -1.51
PSEN1-201ENST00000324501 GAGE6Q13070 117 aa5.65□□□□□ -1.51
PSEN1-201ENST00000324501 TRPT1Q86TN4 253 aaKnown RBP5.65□□□□□ -1.51
PSEN1-201ENST00000324501 IGF2BP2-AS1Q96M15 143 aa5.65□□□□□ -1.51
PSEN1-201ENST00000324501 ATP6V0BQ99437 205 aa5.65□□□□□ -1.51
PSEN1-201ENST00000324501 PLA2G2EQ9NZK7 142 aa5.65□□□□□ -1.51
PSEN1-201ENST00000324501 TP53TG1Q9Y2A0 90 aa5.65□□□□□ -1.51
PSEN1-201ENST00000324501 FRYQ5TBA9 3013 aa5.64□□□□□ -1.51
PSEN1-201ENST00000324501 USP9YO00507 2555 aaPredicted RBP5.64□□□□□ -1.51
PSEN1-201ENST00000324501 INAFM1C9JVW0 142 aa5.64□□□□□ -1.51
PSEN1-201ENST00000324501 VWC2Q2TAL6 325 aa5.64□□□□□ -1.51
PSEN1-201ENST00000324501 PATE2Q6UY27 113 aa5.64□□□□□ -1.51
PSEN1-201ENST00000324501 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP5.64□□□□□ -1.51
PSEN1-201ENST00000324501 SMIM27A0A1W2PRY6 76 aa5.64□□□□□ -1.51
PSEN1-201ENST00000324501 NDUFA11Q86Y39 141 aa5.64□□□□□ -1.51
PSEN1-201ENST00000324501 DYSFO75923 2080 aa5.64□□□□□ -1.51
PSEN1-201ENST00000324501 LTAP01374 205 aa5.64□□□□□ -1.51
PSEN1-201ENST00000324501 PLP1P60201 277 aa5.64□□□□□ -1.51
PSEN1-201ENST00000324501 DNAL4O96015 105 aa5.64□□□□□ -1.51
PSEN1-201ENST00000324501 AGPAT4-IT1Q9H0P7 198 aa5.64□□□□□ -1.51
PSEN1-201ENST00000324501 C3orf79P0CE67 100 aa5.64□□□□□ -1.51
PSEN1-201ENST00000324501 EGR2P11161 476 aaPredicted RBP5.64□□□□□ -1.51
PSEN1-201ENST00000324501 NAA38Q9BRA0 125 aaKnown RBP5.64□□□□□ -1.51
PSEN1-201ENST00000324501 DMXL1Q9Y485 3027 aa5.63□□□□□ -1.51
PSEN1-201ENST00000324501 CFAP47Q6ZTR5 3102 aa5.63□□□□□ -1.51
PSEN1-201ENST00000324501 TRAV25A0A0B4J276 109 aa5.63□□□□□ -1.51
PSEN1-201ENST00000324501 H3BUT2 72 aa5.63□□□□□ -1.51
PSEN1-201ENST00000324501 GP9P14770 177 aa5.63□□□□□ -1.51
PSEN1-201ENST00000324501 FOXI2Q6ZQN5 318 aa5.63□□□□□ -1.51
PSEN1-201ENST00000324501 PRAC2D3DTV9 90 aa5.63□□□□□ -1.51
PSEN1-201ENST00000324501 DEFB4AO15263 64 aa5.63□□□□□ -1.51
PSEN1-201ENST00000324501 ESM1Q9NQ30 184 aa5.63□□□□□ -1.51
PSEN1-201ENST00000324501 DOCK10Q96BY6 2186 aa5.63□□□□□ -1.51
PSEN1-201ENST00000324501 RBMY1BA6NDE4 496 aaKnown RBP5.63□□□□□ -1.51
PSEN1-201ENST00000324501 A6NDX4 124 aa5.63□□□□□ -1.51
PSEN1-201ENST00000324501 RBMY1EA6NEQ0 496 aaKnown RBP5.63□□□□□ -1.51
PSEN1-201ENST00000324501 RBMY1DP0C7P1 496 aaKnown RBP5.63□□□□□ -1.51
PSEN1-201ENST00000324501 RBMY1A1P0DJD3 496 aaKnown RBP5.63□□□□□ -1.51
PSEN1-201ENST00000324501 RBMY1CP0DJD4 496 aa5.63□□□□□ -1.51
PSEN1-201ENST00000324501 FAM104BQ5XKR9 115 aa5.63□□□□□ -1.51
PSEN1-201ENST00000324501 UNQ9165/PRO28630Q6UXU0 137 aa5.63□□□□□ -1.51
PSEN1-201ENST00000324501 ZNF292O60281 2723 aa5.63□□□□□ -1.51
PSEN1-201ENST00000324501 IGKV1-17P01599 117 aa5.63□□□□□ -1.51
PSEN1-201ENST00000324501 ZNF625Q96I27 306 aaPredicted RBP5.63□□□□□ -1.51
PSEN1-201ENST00000324501 COL5A1P20908 1838 aaPredicted RBP5.63□□□□□ -1.51
PSEN1-201ENST00000324501 JMJD1CQ15652 2540 aa5.63□□□□□ -1.51
PSEN1-201ENST00000324501 STPG4Q8N801 248 aa5.62□□□□□ -1.51
PSEN1-201ENST00000324501 U3KQE9 123 aa5.62□□□□□ -1.51
PSEN1-201ENST00000324501 USP34Q70CQ2 3546 aa5.62□□□□□ -1.51
PSEN1-201ENST00000324501 LOC400499M0QZD8 3231 aa5.62□□□□□ -1.51
PSEN1-201ENST00000324501 C11orf71Q6IPW1 123 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms