RNA–Protein interactions for RNA: ENST00000324340.13

DDX39A-202, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,355 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-202ENST00000324340 NUP35Q8NFH5 326 aa9.72□□□□□ -0.85
DDX39A-202ENST00000324340 ZNF492Q9P255 531 aa9.72□□□□□ -0.85
DDX39A-202ENST00000324340 CUBNO60494 3623 aa9.72□□□□□ -0.85
DDX39A-202ENST00000324340 SETD2Q9BYW2 2564 aaPredicted RBP9.72□□□□□ -0.85
DDX39A-202ENST00000324340 IGHV1-24A0A0C4DH33 117 aa9.71□□□□□ -0.86
DDX39A-202ENST00000324340 ZNF207O43670 478 aaKnown RBP9.71□□□□□ -0.86
DDX39A-202ENST00000324340 SAP30O75446 220 aa9.71□□□□□ -0.86
DDX39A-202ENST00000324340 RPL7P18124 248 aaKnown RBP9.71□□□□□ -0.86
DDX39A-202ENST00000324340 HOXD3P31249 432 aaPredicted RBP9.71□□□□□ -0.86
DDX39A-202ENST00000324340 TCL1AP56279 114 aa9.71□□□□□ -0.86
DDX39A-202ENST00000324340 KLHL30-AS1Q8NEE0 82 aa9.71□□□□□ -0.86
DDX39A-202ENST00000324340 URB1-AS1Q96HZ7 61 aa9.71□□□□□ -0.86
DDX39A-202ENST00000324340 GPR82Q96P67 336 aa9.71□□□□□ -0.86
DDX39A-202ENST00000324340 DAZ1Q9NQZ3 744 aaKnown RBP9.71□□□□□ -0.86
DDX39A-202ENST00000324340 SIGLEC8Q9NYZ4 499 aa9.71□□□□□ -0.86
DDX39A-202ENST00000324340 TSSC4Q9Y5U2 329 aaPredicted RBP9.71□□□□□ -0.86
DDX39A-202ENST00000324340 A0A1B0GW15 77 aa9.7□□□□□ -0.86
DDX39A-202ENST00000324340 A8MWL6 223 aa9.7□□□□□ -0.86
DDX39A-202ENST00000324340 LINC01619G3V211 115 aa9.7□□□□□ -0.86
DDX39A-202ENST00000324340 HAX1O00165 279 aa9.7□□□□□ -0.86
DDX39A-202ENST00000324340 APOHP02749 345 aaPredicted RBP9.7□□□□□ -0.86
DDX39A-202ENST00000324340 MYCNOSP40205 109 aa9.7□□□□□ -0.86
DDX39A-202ENST00000324340 C2orf91Q6ZV80 131 aa9.7□□□□□ -0.86
DDX39A-202ENST00000324340 OR10AG1Q8NH19 301 aa9.7□□□□□ -0.86
DDX39A-202ENST00000324340 CITED2Q99967 270 aaPredicted RBP9.7□□□□□ -0.86
DDX39A-202ENST00000324340 UFC1Q9Y3C8 167 aa9.7□□□□□ -0.86
DDX39A-202ENST00000324340 NF1P21359 2839 aa9.7□□□□□ -0.86
DDX39A-202ENST00000324340 TRBV19A0A075B6N1 114 aa9.69□□□□□ -0.86
DDX39A-202ENST00000324340 A0A087X0K7 114 aa9.69□□□□□ -0.86
DDX39A-202ENST00000324340 IGHV7-4-1A0A0J9YVY3 117 aa9.69□□□□□ -0.86
DDX39A-202ENST00000324340 GGTLC3B5MD39 225 aa9.69□□□□□ -0.86
DDX39A-202ENST00000324340 SPINK4O60575 86 aa9.69□□□□□ -0.86
DDX39A-202ENST00000324340 MGST1P10620 155 aaKnown RBP9.69□□□□□ -0.86
DDX39A-202ENST00000324340 FHL3Q13643 280 aa9.69□□□□□ -0.86
DDX39A-202ENST00000324340 KHDC1LQ5JSQ8 128 aa9.69□□□□□ -0.86
DDX39A-202ENST00000324340 GDF5OSQ5U4N7 250 aa9.69□□□□□ -0.86
DDX39A-202ENST00000324340 C16orf54Q6UWD8 224 aa9.69□□□□□ -0.86
DDX39A-202ENST00000324340 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.69□□□□□ -0.86
DDX39A-202ENST00000324340 GATD1Q8NB37 220 aa9.69□□□□□ -0.86
DDX39A-202ENST00000324340 OR11H1Q8NG94 326 aa9.69□□□□□ -0.86
DDX39A-202ENST00000324340 GLMPQ8WWB7 406 aa9.69□□□□□ -0.86
DDX39A-202ENST00000324340 hDV102S1A0JD36 115 aa9.68□□□□□ -0.86
DDX39A-202ENST00000324340 TMEM213A2RRL7 107 aa9.68□□□□□ -0.86
DDX39A-202ENST00000324340 ADARB2-AS1A8MUL3 147 aa9.68□□□□□ -0.86
DDX39A-202ENST00000324340 CT45A10P0DMU9 189 aa9.68□□□□□ -0.86
DDX39A-202ENST00000324340 KRTAP10-3P60369 221 aa9.68□□□□□ -0.86
DDX39A-202ENST00000324340 PDE6HQ13956 83 aa9.68□□□□□ -0.86
DDX39A-202ENST00000324340 DEFB136Q30KP8 78 aa9.68□□□□□ -0.86
DDX39A-202ENST00000324340 CD300EQ496F6 205 aaPredicted RBP9.68□□□□□ -0.86
DDX39A-202ENST00000324340 TM4SF20Q53R12 229 aa9.68□□□□□ -0.86
DDX39A-202ENST00000324340 FOXI2Q6ZQN5 318 aa9.68□□□□□ -0.86
DDX39A-202ENST00000324340 C8orf86Q6ZUL3 223 aa9.68□□□□□ -0.86
DDX39A-202ENST00000324340 BOD1L2Q8IYS8 172 aa9.68□□□□□ -0.86
DDX39A-202ENST00000324340 C17orf77Q96MU5 243 aa9.68□□□□□ -0.86
DDX39A-202ENST00000324340 CLEC5AQ9NY25 188 aa9.68□□□□□ -0.86
DDX39A-202ENST00000324340 KLF12Q9Y4X4 402 aa9.68□□□□□ -0.86
DDX39A-202ENST00000324340 SMAD5-AS1Q9Y6J3 95 aa9.68□□□□□ -0.86
DDX39A-202ENST00000324340 A0A1W2PPM0 123 aa9.67□□□□□ -0.86
DDX39A-202ENST00000324340 PRSS47A8MTI9 375 aa9.67□□□□□ -0.86
DDX39A-202ENST00000324340 FABP2P12104 132 aa9.67□□□□□ -0.86
DDX39A-202ENST00000324340 CSN1S1P47710 185 aa9.67□□□□□ -0.86
DDX39A-202ENST00000324340 SYNJ2BPP57105 145 aa9.67□□□□□ -0.86
DDX39A-202ENST00000324340 LYPD1Q8N2G4 141 aa9.67□□□□□ -0.86
DDX39A-202ENST00000324340 C11orf44Q8N8P7 122 aa9.67□□□□□ -0.86
DDX39A-202ENST00000324340 BLNKQ8WV28 456 aa9.67□□□□□ -0.86
DDX39A-202ENST00000324340 IGHV3-49A0A0A0MS15 119 aa9.66□□□□□ -0.86
DDX39A-202ENST00000324340 PEX7O00628 323 aa9.66□□□□□ -0.86
DDX39A-202ENST00000324340 CHEK1O14757 476 aa9.66□□□□□ -0.86
DDX39A-202ENST00000324340 FGF6P10767 208 aa9.66□□□□□ -0.86
DDX39A-202ENST00000324340 SLURP1P55000 103 aa9.66□□□□□ -0.86
DDX39A-202ENST00000324340 LGALS9BQ3B8N2 356 aa9.66□□□□□ -0.86
DDX39A-202ENST00000324340 LGALS9CQ6DKI2 356 aa9.66□□□□□ -0.86
DDX39A-202ENST00000324340 SIGLEC15Q6ZMC9 328 aa9.66□□□□□ -0.86
DDX39A-202ENST00000324340 NDUFA11Q86Y39 141 aa9.66□□□□□ -0.86
DDX39A-202ENST00000324340 RAX2Q96IS3 184 aa9.66□□□□□ -0.86
DDX39A-202ENST00000324340 SPATA25Q9BR10 227 aa9.66□□□□□ -0.86
DDX39A-202ENST00000324340 RPP21Q9H633 154 aaKnown RBP9.66□□□□□ -0.86
DDX39A-202ENST00000324340 IGHV3OR16-13A0A075B7E8 117 aa9.65□□□□□ -0.86
DDX39A-202ENST00000324340 LOC102724200A0A096LPH7 203 aaPredicted RBP9.65□□□□□ -0.86
DDX39A-202ENST00000324340 IGHV3-74A0A0B4J1X5 117 aa9.65□□□□□ -0.86
DDX39A-202ENST00000324340 IGHV3-66A0A0C4DH42 116 aa9.65□□□□□ -0.86
DDX39A-202ENST00000324340 HIGD1CA8MV81 97 aa9.65□□□□□ -0.86
DDX39A-202ENST00000324340 HIST2H2BDQ6DRA6 164 aa9.65□□□□□ -0.86
DDX39A-202ENST00000324340 RBPMS2Q6ZRY4 209 aaKnown RBP9.65□□□□□ -0.86
DDX39A-202ENST00000324340 RHPN1-AS1Q9BWJ2 59 aa9.65□□□□□ -0.86
DDX39A-202ENST00000324340 Q9H3A6 140 aa9.65□□□□□ -0.86
DDX39A-202ENST00000324340 OTORQ9NRC9 128 aa9.65□□□□□ -0.86
DDX39A-202ENST00000324340 HIGD1BQ9P298 99 aa9.65□□□□□ -0.86
DDX39A-202ENST00000324340 SPCS1Q9Y6A9 102 aa9.65□□□□□ -0.86
DDX39A-202ENST00000324340 A6NJY4 79 aa9.64□□□□□ -0.87
DDX39A-202ENST00000324340 F8W1H4 67 aa9.64□□□□□ -0.87
DDX39A-202ENST00000324340 H3BTX0 84 aa9.64□□□□□ -0.87
DDX39A-202ENST00000324340 CCL24O00175 119 aa9.64□□□□□ -0.87
DDX39A-202ENST00000324340 AZU1P20160 251 aa9.64□□□□□ -0.87
DDX39A-202ENST00000324340 FOXA3P55318 350 aaPredicted RBP9.64□□□□□ -0.87
DDX39A-202ENST00000324340 KIR3DS1Q14943 382 aa9.64□□□□□ -0.87
DDX39A-202ENST00000324340 LINC01559Q495D7 138 aa9.64□□□□□ -0.87
DDX39A-202ENST00000324340 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.64□□□□□ -0.87
DDX39A-202ENST00000324340 DLX4Q92988 240 aaPredicted RBP9.64□□□□□ -0.87
DDX39A-202ENST00000324340 DUX3Q96PT4 197 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms