RNA–Protein interactions for RNA: ENST00000323441.10

HIF1A-201, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,555 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-201ENST00000323441 PRR9Q5T870 116 aa1.69□□□□□ -2.14
HIF1A-201ENST00000323441 LINC00305Q7Z4B0 112 aa1.69□□□□□ -2.14
HIF1A-201ENST00000323441 OR4C5Q8NGB2 326 aa1.69□□□□□ -2.14
HIF1A-201ENST00000323441 SCGB3A2Q96PL1 93 aa1.69□□□□□ -2.14
HIF1A-201ENST00000323441 OR51M1Q9H341 326 aa1.69□□□□□ -2.14
HIF1A-201ENST00000323441 NPVFQ9HCQ7 196 aa1.69□□□□□ -2.14
HIF1A-201ENST00000323441 TMEM14CQ9P0S9 112 aa1.69□□□□□ -2.14
HIF1A-201ENST00000323441 RBAKDNA6NC62 111 aa1.69□□□□□ -2.14
HIF1A-201ENST00000323441 FBLL1A6NHQ2 334 aaKnown RBP1.69□□□□□ -2.14
HIF1A-201ENST00000323441 ANKRD65E5RJM6 399 aa1.69□□□□□ -2.14
HIF1A-201ENST00000323441 OR5G3P0C626 314 aa1.69□□□□□ -2.14
HIF1A-201ENST00000323441 KRTAP2-3P0C7H8 128 aa1.69□□□□□ -2.14
HIF1A-201ENST00000323441 ANXA3P12429 323 aa1.69□□□□□ -2.14
HIF1A-201ENST00000323441 ANXA7P20073 488 aaKnown RBP1.69□□□□□ -2.14
HIF1A-201ENST00000323441 RNASE4P34096 147 aaKnown RBP1.69□□□□□ -2.14
HIF1A-201ENST00000323441 INPP1P49441 399 aa1.69□□□□□ -2.14
HIF1A-201ENST00000323441 AQP4P55087 323 aa1.69□□□□□ -2.14
HIF1A-201ENST00000323441 MRPS10P82664 201 aaKnown RBP1.69□□□□□ -2.14
HIF1A-201ENST00000323441 PIK3CD-AS1Q5SR53 167 aa1.69□□□□□ -2.14
HIF1A-201ENST00000323441 CYB561D1Q8N8Q1 229 aa1.69□□□□□ -2.14
HIF1A-201ENST00000323441 FER1L6-AS1Q8NA97 138 aa1.69□□□□□ -2.14
HIF1A-201ENST00000323441 SUN5Q8TC36 379 aa1.69□□□□□ -2.14
HIF1A-201ENST00000323441 DIRC1Q969H9 104 aa1.69□□□□□ -2.14
HIF1A-201ENST00000323441 GGACTQ9BVM4 153 aa1.69□□□□□ -2.14
HIF1A-201ENST00000323441 KRTAP2-4Q9BYR9 128 aa1.69□□□□□ -2.14
HIF1A-201ENST00000323441 AGPAT4-IT1Q9H0P7 198 aa1.69□□□□□ -2.14
HIF1A-201ENST00000323441 ZNF492Q9P255 531 aa1.69□□□□□ -2.14
HIF1A-201ENST00000323441 TRBV19A0A075B6N1 114 aa1.68□□□□□ -2.14
HIF1A-201ENST00000323441 H3BQ15 152 aa1.68□□□□□ -2.14
HIF1A-201ENST00000323441 SYNGR2O43760 224 aa1.68□□□□□ -2.14
HIF1A-201ENST00000323441 RAB3DO95716 219 aa1.68□□□□□ -2.14
HIF1A-201ENST00000323441 HIST1H1EP10412 219 aaKnown RBP1.68□□□□□ -2.14
HIF1A-201ENST00000323441 MGST1P10620 155 aaKnown RBP1.68□□□□□ -2.14
HIF1A-201ENST00000323441 KRTAP5-9P26371 169 aa1.68□□□□□ -2.14
HIF1A-201ENST00000323441 RAB31Q13636 194 aa1.68□□□□□ -2.14
HIF1A-201ENST00000323441 LYZL2Q7Z4W2 148 aa1.68□□□□□ -2.14
HIF1A-201ENST00000323441 NHLRC2Q8NBF2 726 aa1.68□□□□□ -2.14
HIF1A-201ENST00000323441 OR4D10Q8NGI6 311 aa1.68□□□□□ -2.14
HIF1A-201ENST00000323441 TMED6Q8WW62 240 aa1.68□□□□□ -2.14
HIF1A-201ENST00000323441 PRRT1Q99946 306 aa1.68□□□□□ -2.14
HIF1A-201ENST00000323441 ARL6Q9H0F7 186 aa1.68□□□□□ -2.14
HIF1A-201ENST00000323441 RABL2AQ9UBK7 228 aaPredicted RBP1.68□□□□□ -2.14
HIF1A-201ENST00000323441 RABL2BQ9UNT1 228 aa1.68□□□□□ -2.14
HIF1A-201ENST00000323441 STRAPQ9Y3F4 350 aaKnown RBP1.68□□□□□ -2.14
HIF1A-201ENST00000323441 DISC1C4P0D8 188 aa1.68□□□□□ -2.14
HIF1A-201ENST00000323441 IGLV7-43P04211 117 aa1.68□□□□□ -2.14
HIF1A-201ENST00000323441 RPS19P39019 145 aaKnown RBP1.68□□□□□ -2.14
HIF1A-201ENST00000323441 ZNF138P52744 262 aa1.68□□□□□ -2.14
HIF1A-201ENST00000323441 BLOC1S1P78537 153 aa1.68□□□□□ -2.14
HIF1A-201ENST00000323441 BAK1Q16611 211 aa1.68□□□□□ -2.14
HIF1A-201ENST00000323441 MIAQ16674 131 aa1.68□□□□□ -2.14
HIF1A-201ENST00000323441 TMEM78Q5T7P6 136 aa1.68□□□□□ -2.14
HIF1A-201ENST00000323441 TMEM75Q8N9X5 138 aa1.68□□□□□ -2.14
HIF1A-201ENST00000323441 SVIPQ8NHG7 77 aa1.68□□□□□ -2.14
HIF1A-201ENST00000323441 CHAC2Q8WUX2 184 aa1.68□□□□□ -2.14
HIF1A-201ENST00000323441 RAB26Q9ULW5 256 aa1.68□□□□□ -2.14
HIF1A-201ENST00000323441 J3KRW8 73 aa1.68□□□□□ -2.14
HIF1A-201ENST00000323441 TAS2R30P59541 319 aa1.68□□□□□ -2.14
HIF1A-201ENST00000323441 UBE2MP61081 183 aaKnown RBP1.68□□□□□ -2.14
HIF1A-201ENST00000323441 SUMO1P63165 101 aaKnown RBP1.68□□□□□ -2.14
HIF1A-201ENST00000323441 SCGB2B2Q4G0G5 96 aa1.68□□□□□ -2.14
HIF1A-201ENST00000323441 CFAP126Q5VTH2 177 aa1.68□□□□□ -2.14
HIF1A-201ENST00000323441 TMEM14EPQ6UXP3 125 aa1.68□□□□□ -2.14
HIF1A-201ENST00000323441 ZFP2Q6ZN57 461 aa1.68□□□□□ -2.14
HIF1A-201ENST00000323441 Q6ZQT7 251 aa1.68□□□□□ -2.14
HIF1A-201ENST00000323441 SNX29P2Q8IUI4 249 aa1.68□□□□□ -2.14
HIF1A-201ENST00000323441 C12orf45Q8N5I9 185 aaPredicted RBP1.68□□□□□ -2.14
HIF1A-201ENST00000323441 OR10G7Q8NGN6 311 aa1.68□□□□□ -2.14
HIF1A-201ENST00000323441 OR52I2Q8NH67 350 aa1.68□□□□□ -2.14
HIF1A-201ENST00000323441 GTSF1Q8WW33 167 aa1.68□□□□□ -2.14
HIF1A-201ENST00000323441 PFDN5Q99471 154 aa1.68□□□□□ -2.14
HIF1A-201ENST00000323441 ATP5SQ99766 215 aa1.68□□□□□ -2.14
HIF1A-201ENST00000323441 SAMD10Q9BYL1 202 aa1.68□□□□□ -2.14
HIF1A-201ENST00000323441 MIXL1Q9H2W2 232 aa1.68□□□□□ -2.14
HIF1A-201ENST00000323441 VCX3BQ9H321 246 aa1.68□□□□□ -2.14
HIF1A-201ENST00000323441 WFDC1Q9HC57 220 aa1.68□□□□□ -2.14
HIF1A-201ENST00000323441 LINC00474Q9P2X8 69 aa1.68□□□□□ -2.14
HIF1A-201ENST00000323441 A0A096LNI7 61 aa1.67□□□□□ -2.14
HIF1A-201ENST00000323441 IGHV3-16A0A0C4DH30 117 aa1.67□□□□□ -2.14
HIF1A-201ENST00000323441 LOC100506127A0A0U1RQW1 187 aa1.67□□□□□ -2.14
HIF1A-201ENST00000323441 DIRC3C9JPN6 131 aa1.67□□□□□ -2.14
HIF1A-201ENST00000323441 NDUFB4O95168 129 aa1.67□□□□□ -2.14
HIF1A-201ENST00000323441 SMIM18P0DKX4 95 aa1.67□□□□□ -2.14
HIF1A-201ENST00000323441 IAPPP10997 89 aa1.67□□□□□ -2.14
HIF1A-201ENST00000323441 FGF8P55075 233 aaPredicted RBP1.67□□□□□ -2.14
HIF1A-201ENST00000323441 ERCC8Q13216 396 aa1.67□□□□□ -2.14
HIF1A-201ENST00000323441 C10orf113Q5VZT2 155 aa1.67□□□□□ -2.14
HIF1A-201ENST00000323441 STPG4Q8N801 248 aa1.67□□□□□ -2.14
HIF1A-201ENST00000323441 OR1L4Q8NGR5 311 aa1.67□□□□□ -2.14
HIF1A-201ENST00000323441 SMIM8Q96KF7 97 aa1.67□□□□□ -2.14
HIF1A-201ENST00000323441 C1orf43Q9BWL3 253 aa1.67□□□□□ -2.14
HIF1A-201ENST00000323441 CDIP1Q9H305 208 aa1.67□□□□□ -2.14
HIF1A-201ENST00000323441 SLC39A9Q9NUM3 307 aa1.67□□□□□ -2.14
HIF1A-201ENST00000323441 AGPAT2O15120 278 aa1.67□□□□□ -2.14
HIF1A-201ENST00000323441 COX7A2P2O60397 106 aa1.67□□□□□ -2.14
HIF1A-201ENST00000323441 AKAIN1P0CW23 69 aa1.67□□□□□ -2.14
HIF1A-201ENST00000323441 SEC61BP60468 96 aaKnown RBP1.67□□□□□ -2.14
HIF1A-201ENST00000323441 PKIAP61925 76 aa1.67□□□□□ -2.14
HIF1A-201ENST00000323441 SPANXN5Q5MJ07 72 aa1.67□□□□□ -2.14
HIF1A-201ENST00000323441 FAM159AQ6UWV7 190 aa1.67□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms