RNA–Protein interactions for RNA: ENST00000322507.12

COL12A1-201, Transcript of collagen type XII alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL12A1, Length 11,723 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-201ENST00000322507 I3L3M4 83 aa7.85□□□□□ -1.15
COL12A1-201ENST00000322507 LYZL1Q6UWQ5 148 aa7.85□□□□□ -1.15
COL12A1-201ENST00000322507 NOTCH2Q04721 2471 aa7.85□□□□□ -1.15
COL12A1-201ENST00000322507 C16orf54Q6UWD8 224 aa7.84□□□□□ -1.15
COL12A1-201ENST00000322507 IGHV3-35A0A0C4DH35 117 aa7.84□□□□□ -1.15
COL12A1-201ENST00000322507 CELA3BP08861 270 aa7.84□□□□□ -1.15
COL12A1-201ENST00000322507 IGKV1D-43A0A0B4J1Z2 117 aa7.84□□□□□ -1.15
COL12A1-201ENST00000322507 PAQR4Q8N4S7 273 aaPredicted RBP7.84□□□□□ -1.15
COL12A1-201ENST00000322507 PMS2P5A8MQ11 134 aa7.84□□□□□ -1.15
COL12A1-201ENST00000322507 PRSS46E5RG02 174 aa7.84□□□□□ -1.15
COL12A1-201ENST00000322507 IGHV1-46P01743 117 aa7.84□□□□□ -1.15
COL12A1-201ENST00000322507 GATA4P43694 442 aa7.84□□□□□ -1.15
COL12A1-201ENST00000322507 HIST2H2BCQ6DN03 193 aa7.84□□□□□ -1.15
COL12A1-201ENST00000322507 HIST2H2BDQ6DRA6 164 aa7.84□□□□□ -1.15
COL12A1-201ENST00000322507 LINC01619G3V211 115 aa7.84□□□□□ -1.15
COL12A1-201ENST00000322507 HIGD2BQ4VC39 106 aa7.84□□□□□ -1.15
COL12A1-201ENST00000322507 CCL3L1P16619 93 aa7.84□□□□□ -1.15
COL12A1-201ENST00000322507 IGHV3OR16-13A0A075B7E8 117 aa7.84□□□□□ -1.15
COL12A1-201ENST00000322507 IGHV3-74A0A0B4J1X5 117 aa7.84□□□□□ -1.15
COL12A1-201ENST00000322507 BUB1B-PAK6H3BSN5 160 aa7.84□□□□□ -1.15
COL12A1-201ENST00000322507 LINC00479Q96M42 142 aa7.84□□□□□ -1.15
COL12A1-201ENST00000322507 RSPO4Q2I0M5 234 aaPredicted RBP7.84□□□□□ -1.16
COL12A1-201ENST00000322507 IGHV3-66A0A0C4DH42 116 aa7.83□□□□□ -1.16
COL12A1-201ENST00000322507 H0YJW9 148 aa7.83□□□□□ -1.16
COL12A1-201ENST00000322507 TIMM17AQ99595 171 aa7.83□□□□□ -1.16
COL12A1-201ENST00000322507 IGHV1OR15-1A0A075B7D0 117 aa7.83□□□□□ -1.16
COL12A1-201ENST00000322507 C9orf47Q6ZRZ4 202 aa7.83□□□□□ -1.16
COL12A1-201ENST00000322507 FLVCR1-AS1Q8TAF5 88 aa7.83□□□□□ -1.16
COL12A1-201ENST00000322507 CFHR4Q92496 578 aa7.83□□□□□ -1.16
COL12A1-201ENST00000322507 K7ENP7 123 aa7.83□□□□□ -1.16
COL12A1-201ENST00000322507 GGNQ86UU5 652 aa7.83□□□□□ -1.16
COL12A1-201ENST00000322507 IGHV3-49A0A0A0MS15 119 aa7.83□□□□□ -1.16
COL12A1-201ENST00000322507 SMIM27A0A1W2PRY6 76 aa7.83□□□□□ -1.16
COL12A1-201ENST00000322507 WFDC1Q9HC57 220 aa7.83□□□□□ -1.16
COL12A1-201ENST00000322507 FAM201AQ5SY85 155 aa7.83□□□□□ -1.16
COL12A1-201ENST00000322507 CUL9Q8IWT3 2517 aa7.83□□□□□ -1.16
COL12A1-201ENST00000322507 ZNF474Q6S9Z5 364 aaPredicted RBP7.83□□□□□ -1.16
COL12A1-201ENST00000322507 RMI2Q96E14 147 aa7.83□□□□□ -1.16
COL12A1-201ENST00000322507 MBD3L4A6NDZ8 208 aaPredicted RBP7.83□□□□□ -1.16
COL12A1-201ENST00000322507 MBD3L3A6NE82 208 aaPredicted RBP7.83□□□□□ -1.16
COL12A1-201ENST00000322507 MBD3L5A6NJ08 208 aaPredicted RBP7.83□□□□□ -1.16
COL12A1-201ENST00000322507 HGFACQ04756 655 aa7.83□□□□□ -1.16
COL12A1-201ENST00000322507 MBD3L2Q8NHZ7 208 aaPredicted RBP7.83□□□□□ -1.16
COL12A1-201ENST00000322507 COX7CP15954 63 aa7.82□□□□□ -1.16
COL12A1-201ENST00000322507 IGHV3-23P01764 117 aa7.82□□□□□ -1.16
COL12A1-201ENST00000322507 SIRPDQ9H106 197 aa7.82□□□□□ -1.16
COL12A1-201ENST00000322507 LYPD3O95274 346 aa7.82□□□□□ -1.16
COL12A1-201ENST00000322507 RPP25LQ8N5L8 163 aaKnown RBP7.82□□□□□ -1.16
COL12A1-201ENST00000322507 SIGLEC9Q9Y336 463 aa7.82□□□□□ -1.16
COL12A1-201ENST00000322507 TP53TG1Q9Y2A0 90 aa7.82□□□□□ -1.16
COL12A1-201ENST00000322507 TMEM200BQ69YZ2 307 aa7.82□□□□□ -1.16
COL12A1-201ENST00000322507 C20orf197Q8N268 126 aa7.82□□□□□ -1.16
COL12A1-201ENST00000322507 OPRPNQ99935 248 aaPredicted RBP7.82□□□□□ -1.16
COL12A1-201ENST00000322507 PRB3Q04118 309 aaPredicted RBP7.82□□□□□ -1.16
COL12A1-201ENST00000322507 LIME1Q9H400 295 aa7.82□□□□□ -1.16
COL12A1-201ENST00000322507 CYTL1Q9NRR1 136 aa7.82□□□□□ -1.16
COL12A1-201ENST00000322507 HRCT1Q6UXD1 115 aa7.82□□□□□ -1.16
COL12A1-201ENST00000322507 CD55P08174 381 aa7.81□□□□□ -1.16
COL12A1-201ENST00000322507 WIPF2Q8TF74 440 aaPredicted RBP7.81□□□□□ -1.16
COL12A1-201ENST00000322507 C17orf82Q86X59 251 aaPredicted RBP7.81□□□□□ -1.16
COL12A1-201ENST00000322507 TMEM14BQ9NUH8 114 aa7.81□□□□□ -1.16
COL12A1-201ENST00000322507 SPRR3Q9UBC9 169 aa7.81□□□□□ -1.16
COL12A1-201ENST00000322507 TGFBR3LH3BV60 316 aa7.81□□□□□ -1.16
COL12A1-201ENST00000322507 ZNF672Q499Z4 452 aaPredicted RBP7.81□□□□□ -1.16
COL12A1-201ENST00000322507 ZNF876PQ49A33 203 aa7.81□□□□□ -1.16
COL12A1-201ENST00000322507 UBE2DNLQ8IWF7 75 aa7.81□□□□□ -1.16
COL12A1-201ENST00000322507 SHANK2-AS3Q9BTD1 123 aa7.81□□□□□ -1.16
COL12A1-201ENST00000322507 TMEM14CQ9P0S9 112 aa7.81□□□□□ -1.16
COL12A1-201ENST00000322507 NXPH4O95158 308 aa7.81□□□□□ -1.16
COL12A1-201ENST00000322507 ZCCHC24Q8N2G6 241 aaKnown RBP7.81□□□□□ -1.16
COL12A1-201ENST00000322507 LINC01356Q8N9X3 169 aa7.81□□□□□ -1.16
COL12A1-201ENST00000322507 E9PQ18 207 aa7.81□□□□□ -1.16
COL12A1-201ENST00000322507 SH2D1AO60880 128 aa7.81□□□□□ -1.16
COL12A1-201ENST00000322507 PFN1P07737 140 aaKnown RBP7.81□□□□□ -1.16
COL12A1-201ENST00000322507 C3orf56Q8N813 242 aa7.81□□□□□ -1.16
COL12A1-201ENST00000322507 LGALS9O00182 355 aa7.8□□□□□ -1.16
COL12A1-201ENST00000322507 FOXL2NBQ6ZUU3 175 aa7.8□□□□□ -1.16
COL12A1-201ENST00000322507 NRGNQ92686 78 aa7.8□□□□□ -1.16
COL12A1-201ENST00000322507 MT-ATP8P03928 68 aa7.8□□□□□ -1.16
COL12A1-201ENST00000322507 PRB2P02812 416 aaPredicted RBP7.8□□□□□ -1.16
COL12A1-201ENST00000322507 LINC00694P0DN24 101 aa7.8□□□□□ -1.16
COL12A1-201ENST00000322507 Q6Q795 121 aa7.8□□□□□ -1.16
COL12A1-201ENST00000322507 Q86TA4 180 aa7.8□□□□□ -1.16
COL12A1-201ENST00000322507 PIEZO1Q92508 2521 aa7.8□□□□□ -1.16
COL12A1-201ENST00000322507 IGHV3-11P01762 117 aa7.8□□□□□ -1.16
COL12A1-201ENST00000322507 WFDC2Q14508 124 aa7.8□□□□□ -1.16
COL12A1-201ENST00000322507 ZNRF2Q8NHG8 242 aa7.8□□□□□ -1.16
COL12A1-201ENST00000322507 C20orf78Q9BR46 151 aa7.8□□□□□ -1.16
COL12A1-201ENST00000322507 DEPPQ9NTK1 212 aa7.8□□□□□ -1.16
COL12A1-201ENST00000322507 ZNF561-AS1K7EIQ3 104 aa7.8□□□□□ -1.16
COL12A1-201ENST00000322507 COA6Q5JTJ3 125 aaKnown RBP7.8□□□□□ -1.16
COL12A1-201ENST00000322507 Q8TCH9 128 aa7.8□□□□□ -1.16
COL12A1-201ENST00000322507 TRAV23DV6A0A075B6W5 121 aa7.79□□□□□ -1.16
COL12A1-201ENST00000322507 ZNF837Q96EG3 531 aaPredicted RBP7.79□□□□□ -1.16
COL12A1-201ENST00000322507 ATP1A1-AS1Q5TC04 95 aa7.79□□□□□ -1.16
COL12A1-201ENST00000322507 KLK9Q9UKQ9 250 aa7.79□□□□□ -1.16
COL12A1-201ENST00000322507 FOXF2Q12947 444 aa7.79□□□□□ -1.16
COL12A1-201ENST00000322507 GAFA1Q96PS6 74 aa7.79□□□□□ -1.16
COL12A1-201ENST00000322507 TRGV1A0A0A0MS02 117 aa7.79□□□□□ -1.16
COL12A1-201ENST00000322507 J3QLI3 93 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms