RNA–Protein interactions for RNA: ENST00000318842.11

RPGR-201, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RPGR, Length 3,108 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-201ENST00000318842 A0A1B0GWB2 263 aa7.4□□□□□ -1.23
RPGR-201ENST00000318842 MGPP08493 103 aa7.4□□□□□ -1.23
RPGR-201ENST00000318842 C15orf32Q32M92 178 aa7.4□□□□□ -1.23
RPGR-201ENST00000318842 C14orf178Q8N769 122 aaPredicted RBP7.4□□□□□ -1.23
RPGR-201ENST00000318842 NUP37Q8NFH4 326 aa7.4□□□□□ -1.23
RPGR-201ENST00000318842 FAM57AQ8TBR7 257 aa7.4□□□□□ -1.23
RPGR-201ENST00000318842 KIR2DL4Q99706 377 aa7.4□□□□□ -1.23
RPGR-201ENST00000318842 SIGMAR1Q99720 223 aa7.4□□□□□ -1.23
RPGR-201ENST00000318842 HIVEP3Q5T1R4 2406 aa7.4□□□□□ -1.23
RPGR-201ENST00000318842 ARL3P36405 182 aa7.39□□□□□ -1.23
RPGR-201ENST00000318842 CD300EQ496F6 205 aaPredicted RBP7.39□□□□□ -1.23
RPGR-201ENST00000318842 MSRB2Q9Y3D2 182 aa7.39□□□□□ -1.23
RPGR-201ENST00000318842 FLNCQ14315 2725 aa7.39□□□□□ -1.23
RPGR-201ENST00000318842 DPM2O94777 84 aa7.39□□□□□ -1.23
RPGR-201ENST00000318842 SPANXN1Q5VSR9 72 aa7.39□□□□□ -1.23
RPGR-201ENST00000318842 ZNF502Q8TBZ5 544 aa7.39□□□□□ -1.23
RPGR-201ENST00000318842 MFAP4P55083 255 aa7.38□□□□□ -1.23
RPGR-201ENST00000318842 ZNF672Q499Z4 452 aaPredicted RBP7.38□□□□□ -1.23
RPGR-201ENST00000318842 PVRIGQ6DKI7 326 aa7.38□□□□□ -1.23
RPGR-201ENST00000318842 Q6ZS92 163 aa7.38□□□□□ -1.23
RPGR-201ENST00000318842 NFE4Q86UQ8 179 aa7.38□□□□□ -1.23
RPGR-201ENST00000318842 TLN2Q9Y4G6 2542 aa7.38□□□□□ -1.23
RPGR-201ENST00000318842 PSMB2P49721 201 aa7.38□□□□□ -1.23
RPGR-201ENST00000318842 LINC00477Q96M19 166 aa7.38□□□□□ -1.23
RPGR-201ENST00000318842 IGLV11-55A0A075B6I3 123 aa7.38□□□□□ -1.23
RPGR-201ENST00000318842 TRBV12-3P01733 135 aa7.38□□□□□ -1.23
RPGR-201ENST00000318842 RPL11P62913 178 aaKnown RBP7.38□□□□□ -1.23
RPGR-201ENST00000318842 TCTEX1D4Q5JR98 221 aa7.38□□□□□ -1.23
RPGR-201ENST00000318842 OPRPNQ99935 248 aaPredicted RBP7.38□□□□□ -1.23
RPGR-201ENST00000318842 LINC01549A6NIU2 74 aa7.37□□□□□ -1.23
RPGR-201ENST00000318842 MT-ATP8P03928 68 aa7.37□□□□□ -1.23
RPGR-201ENST00000318842 SMCPP49901 116 aaPredicted RBP7.37□□□□□ -1.23
RPGR-201ENST00000318842 Q8NA96 180 aa7.37□□□□□ -1.23
RPGR-201ENST00000318842 OR5A1Q8NGJ0 315 aa7.37□□□□□ -1.23
RPGR-201ENST00000318842 PSMG3-AS1Q96PY0 264 aa7.37□□□□□ -1.23
RPGR-201ENST00000318842 FABP5P3A8MUU1 101 aa7.36□□□□□ -1.23
RPGR-201ENST00000318842 LY6LH3BQJ8 138 aa7.36□□□□□ -1.23
RPGR-201ENST00000318842 GNRH2O43555 120 aa7.36□□□□□ -1.23
RPGR-201ENST00000318842 TSPAN13O95857 204 aa7.36□□□□□ -1.23
RPGR-201ENST00000318842 IGKV3-20P01619 116 aa7.36□□□□□ -1.23
RPGR-201ENST00000318842 IGHV3-11P01762 117 aa7.36□□□□□ -1.23
RPGR-201ENST00000318842 SLC25A16P16260 332 aa7.36□□□□□ -1.23
RPGR-201ENST00000318842 ZFP36P26651 326 aaKnown RBP7.36□□□□□ -1.23
RPGR-201ENST00000318842 RPL39P62891 51 aaKnown RBP7.36□□□□□ -1.23
RPGR-201ENST00000318842 IGF2-ASQ6U949 168 aa7.36□□□□□ -1.23
RPGR-201ENST00000318842 FOXI2Q6ZQN5 318 aa7.36□□□□□ -1.23
RPGR-201ENST00000318842 Q6ZS46 218 aa7.36□□□□□ -1.23
RPGR-201ENST00000318842 NRACQ8N912 160 aa7.36□□□□□ -1.23
RPGR-201ENST00000318842 SYT8Q8NBV8 401 aa7.36□□□□□ -1.23
RPGR-201ENST00000318842 C20orf173Q96LM9 149 aa7.36□□□□□ -1.23
RPGR-201ENST00000318842 COL25A1Q9BXS0 654 aaPredicted RBP7.36□□□□□ -1.23
RPGR-201ENST00000318842 MRPL16Q9NX20 251 aaKnown RBP7.36□□□□□ -1.23
RPGR-201ENST00000318842 IGLV2-18A0A075B6J9 118 aa7.36□□□□□ -1.23
RPGR-201ENST00000318842 MORN3Q6PF18 240 aaPredicted RBP7.36□□□□□ -1.23
RPGR-201ENST00000318842 DPM3Q9P2X0 92 aa7.36□□□□□ -1.23
RPGR-201ENST00000318842 ZNF580Q9UK33 172 aa7.36□□□□□ -1.23
RPGR-201ENST00000318842 IGHV7-4-1A0A0J9YVY3 117 aa7.36□□□□□ -1.23
RPGR-201ENST00000318842 E9PLD3 99 aa7.36□□□□□ -1.23
RPGR-201ENST00000318842 ATP6V0E1O15342 81 aa7.36□□□□□ -1.23
RPGR-201ENST00000318842 GAGE13Q4V321 117 aa7.36□□□□□ -1.23
RPGR-201ENST00000318842 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.36□□□□□ -1.23
RPGR-201ENST00000318842 SCGB1D4Q6XE38 83 aa7.36□□□□□ -1.23
RPGR-201ENST00000318842 IGHV7-81A0A0B4J1V7 117 aa7.35□□□□□ -1.23
RPGR-201ENST00000318842 TRAV8-2A0A0B4J237 113 aa7.35□□□□□ -1.23
RPGR-201ENST00000318842 CEACAM4O75871 244 aa7.35□□□□□ -1.23
RPGR-201ENST00000318842 RPL7P18124 248 aaKnown RBP7.35□□□□□ -1.23
RPGR-201ENST00000318842 HIST2H2BDQ6DRA6 164 aa7.35□□□□□ -1.23
RPGR-201ENST00000318842 MYOZ3Q8TDC0 251 aa7.35□□□□□ -1.23
RPGR-201ENST00000318842 MUC4Q99102 2169 aa7.35□□□□□ -1.23
RPGR-201ENST00000318842 FAM110AQ9BQ89 295 aa7.35□□□□□ -1.23
RPGR-201ENST00000318842 WNK1Q9H4A3 2382 aa7.35□□□□□ -1.23
RPGR-201ENST00000318842 A0A087WWL8 130 aa7.35□□□□□ -1.23
RPGR-201ENST00000318842 ADARB2-AS1A8MUL3 147 aa7.35□□□□□ -1.23
RPGR-201ENST00000318842 Q6AWC8 147 aa7.35□□□□□ -1.23
RPGR-201ENST00000318842 VMO1Q7Z5L0 202 aa7.35□□□□□ -1.23
RPGR-201ENST00000318842 SCGB3A1Q96QR1 104 aa7.35□□□□□ -1.23
RPGR-201ENST00000318842 DUSP14O95147 198 aaKnown RBP7.34□□□□□ -1.23
RPGR-201ENST00000318842 HERV-K104P63124 156 aa7.34□□□□□ -1.23
RPGR-201ENST00000318842 LAGE3Q14657 143 aa7.34□□□□□ -1.23
RPGR-201ENST00000318842 GATD1Q8NB37 220 aa7.34□□□□□ -1.23
RPGR-201ENST00000318842 RAX2Q96IS3 184 aa7.34□□□□□ -1.23
RPGR-201ENST00000318842 PRADC1Q9BSG0 188 aa7.34□□□□□ -1.23
RPGR-201ENST00000318842 ZMAT4Q9H898 229 aa7.34□□□□□ -1.23
RPGR-201ENST00000318842 CLPSL1A2RUU4 121 aa7.34□□□□□ -1.23
RPGR-201ENST00000318842 ZNF815PA8K554 130 aa7.34□□□□□ -1.23
RPGR-201ENST00000318842 CCL21O00585 134 aa7.34□□□□□ -1.23
RPGR-201ENST00000318842 BRI3O95415 125 aa7.34□□□□□ -1.23
RPGR-201ENST00000318842 LGALS1P09382 135 aaKnown RBP7.34□□□□□ -1.23
RPGR-201ENST00000318842 UNQ9165/PRO28630Q6UXU0 137 aa7.34□□□□□ -1.23
RPGR-201ENST00000318842 TTC9CQ8N5M4 171 aa7.34□□□□□ -1.23
RPGR-201ENST00000318842 MRAP2Q96G30 205 aa7.34□□□□□ -1.23
RPGR-201ENST00000318842 CCDC140Q96MF4 163 aa7.34□□□□□ -1.23
RPGR-201ENST00000318842 GEMIN7Q9H840 131 aaKnown RBP7.34□□□□□ -1.23
RPGR-201ENST00000318842 MYO9AB2RTY4 2548 aa7.34□□□□□ -1.23
RPGR-201ENST00000318842 NF1P21359 2839 aa7.34□□□□□ -1.24
RPGR-201ENST00000318842 OR11H12B2RN74 326 aa7.34□□□□□ -1.24
RPGR-201ENST00000318842 SRSF9Q13242 221 aaKnown RBP eCLIP7.34□□□□□ -1.24
RPGR-201ENST00000318842 TMEM30BQ3MIR4 351 aa7.34□□□□□ -1.24
RPGR-201ENST00000318842 OR11H1Q8NG94 326 aa7.34□□□□□ -1.24
RPGR-201ENST00000318842 OR11H2Q8NH07 326 aa7.34□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms