RNA–Protein interactions for RNA: ENST00000316105.6

PCDHB9-201, Transcript of protocadherin beta 9, humanhuman

APPRIS P1 BASIC

Gene PCDHB9, Length 4,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB9-201ENST00000316105 C10orf105Q8TEF2 133 aa10.42□□□□□ -0.74
PCDHB9-201ENST00000316105 FOXE3Q13461 319 aa10.42□□□□□ -0.74
PCDHB9-201ENST00000316105 TMEM95Q3KNT9 176 aa10.42□□□□□ -0.74
PCDHB9-201ENST00000316105 C11orf71Q6IPW1 123 aa10.42□□□□□ -0.74
PCDHB9-201ENST00000316105 YAE1D1Q9NRH1 226 aa10.42□□□□□ -0.74
PCDHB9-201ENST00000316105 PRAC2D3DTV9 90 aa10.42□□□□□ -0.74
PCDHB9-201ENST00000316105 LINC00173Q6ZV60 143 aa10.42□□□□□ -0.74
PCDHB9-201ENST00000316105 VPS13AQ96RL7 3174 aa10.41□□□□□ -0.74
PCDHB9-201ENST00000316105 F6UB75 175 aa10.41□□□□□ -0.74
PCDHB9-201ENST00000316105 ZC2HC1BQ5TFG8 222 aa10.41□□□□□ -0.74
PCDHB9-201ENST00000316105 MLST8Q9BVC4 326 aa10.41□□□□□ -0.74
PCDHB9-201ENST00000316105 A0A087WWL8 130 aa10.41□□□□□ -0.74
PCDHB9-201ENST00000316105 IGHV4-59P01825 116 aa10.41□□□□□ -0.74
PCDHB9-201ENST00000316105 JMJD8Q96S16 334 aa10.41□□□□□ -0.74
PCDHB9-201ENST00000316105 CSTL1Q9H114 145 aa10.41□□□□□ -0.74
PCDHB9-201ENST00000316105 CHTOPQ9Y3Y2 248 aaKnown RBP10.41□□□□□ -0.74
PCDHB9-201ENST00000316105 LINC01548A6NM66 108 aa10.41□□□□□ -0.74
PCDHB9-201ENST00000316105 SFTA2Q6UW10 78 aa10.41□□□□□ -0.74
PCDHB9-201ENST00000316105 MRPL16Q9NX20 251 aaKnown RBP10.41□□□□□ -0.74
PCDHB9-201ENST00000316105 MSRB1Q9NZV6 116 aa10.41□□□□□ -0.74
PCDHB9-201ENST00000316105 ANXA2RQ3ZCQ2 193 aa10.4□□□□□ -0.74
PCDHB9-201ENST00000316105 PAPPA-AS1Q5QFB9 102 aa10.4□□□□□ -0.74
PCDHB9-201ENST00000316105 GDF5OSQ5U4N7 250 aa10.4□□□□□ -0.74
PCDHB9-201ENST00000316105 MBD6Q96DN6 1003 aa10.4□□□□□ -0.74
PCDHB9-201ENST00000316105 SMPXQ9UHP9 88 aa10.4□□□□□ -0.74
PCDHB9-201ENST00000316105 PF4P02776 101 aa10.4□□□□□ -0.74
PCDHB9-201ENST00000316105 PRB1P04280 392 aa10.4□□□□□ -0.74
PCDHB9-201ENST00000316105 DEFB112Q30KQ8 113 aa10.4□□□□□ -0.74
PCDHB9-201ENST00000316105 LINC01559Q495D7 138 aa10.4□□□□□ -0.74
PCDHB9-201ENST00000316105 ZNF48Q96MX3 618 aaPredicted RBP10.4□□□□□ -0.74
PCDHB9-201ENST00000316105 TLN2Q9Y4G6 2542 aa10.4□□□□□ -0.74
PCDHB9-201ENST00000316105 RAI1Q7Z5J4 1906 aaPredicted RBP10.4□□□□□ -0.74
PCDHB9-201ENST00000316105 EMP1P54849 157 aa10.4□□□□□ -0.74
PCDHB9-201ENST00000316105 HSD52Q0P140 79 aa10.4□□□□□ -0.74
PCDHB9-201ENST00000316105 RRN3P1Q2M238 152 aa10.4□□□□□ -0.74
PCDHB9-201ENST00000316105 BCL6BQ8N143 479 aaPredicted RBP10.4□□□□□ -0.74
PCDHB9-201ENST00000316105 OR9G4Q8NGQ1 327 aa10.4□□□□□ -0.74
PCDHB9-201ENST00000316105 K7EP13 123 aa10.4□□□□□ -0.75
PCDHB9-201ENST00000316105 PRSS2P07478 247 aa10.4□□□□□ -0.75
PCDHB9-201ENST00000316105 IGHV7-4-1A0A0J9YVY3 117 aa10.39□□□□□ -0.75
PCDHB9-201ENST00000316105 TRGV11A0A075B6L2 103 aa10.39□□□□□ -0.75
PCDHB9-201ENST00000316105 KIR3DS1Q14943 382 aa10.39□□□□□ -0.75
PCDHB9-201ENST00000316105 REV3LO60673 3130 aa10.39□□□□□ -0.75
PCDHB9-201ENST00000316105 WDFY4Q6ZS81 3184 aa10.39□□□□□ -0.75
PCDHB9-201ENST00000316105 USP9XQ93008 2570 aaPredicted RBP10.39□□□□□ -0.75
PCDHB9-201ENST00000316105 ZNF747Q9BV97 191 aa10.39□□□□□ -0.75
PCDHB9-201ENST00000316105 C2CD3Q4AC94 2353 aa10.39□□□□□ -0.75
PCDHB9-201ENST00000316105 A0A1B0GXF2 115 aa10.38□□□□□ -0.75
PCDHB9-201ENST00000316105 SPRY2O43597 315 aa10.38□□□□□ -0.75
PCDHB9-201ENST00000316105 APOMO95445 188 aa10.38□□□□□ -0.75
PCDHB9-201ENST00000316105 MYCNOSP40205 109 aa10.38□□□□□ -0.75
PCDHB9-201ENST00000316105 TP53TG3Q9ULZ0 132 aa10.38□□□□□ -0.75
PCDHB9-201ENST00000316105 ZNF462Q96JM2 2506 aa10.38□□□□□ -0.75
PCDHB9-201ENST00000316105 RBAKDNA6NC62 111 aa10.38□□□□□ -0.75
PCDHB9-201ENST00000316105 COX6CP09669 75 aa10.38□□□□□ -0.75
PCDHB9-201ENST00000316105 SPINK13Q1W4C9 94 aa10.38□□□□□ -0.75
PCDHB9-201ENST00000316105 PRSS47A8MTI9 375 aa10.38□□□□□ -0.75
PCDHB9-201ENST00000316105 Q8N8P6 123 aa10.38□□□□□ -0.75
PCDHB9-201ENST00000316105 KLHL30-AS1Q8NEE0 82 aa10.38□□□□□ -0.75
PCDHB9-201ENST00000316105 ZNF479Q96JC4 524 aa10.38□□□□□ -0.75
PCDHB9-201ENST00000316105 CD300EQ496F6 205 aaPredicted RBP10.38□□□□□ -0.75
PCDHB9-201ENST00000316105 IGHV3-73A0A0B4J1V6 119 aa10.37□□□□□ -0.75
PCDHB9-201ENST00000316105 H3BUA1 57 aa10.37□□□□□ -0.75
PCDHB9-201ENST00000316105 GATA1P15976 413 aaPredicted RBP10.37□□□□□ -0.75
PCDHB9-201ENST00000316105 MRAP2Q96G30 205 aa10.37□□□□□ -0.75
PCDHB9-201ENST00000316105 GEMIN7Q9H840 131 aaKnown RBP10.37□□□□□ -0.75
PCDHB9-201ENST00000316105 PRORYQ9H606 182 aa10.37□□□□□ -0.75
PCDHB9-201ENST00000316105 TRBV6-1A0A0K0K1D8 114 aa10.37□□□□□ -0.75
PCDHB9-201ENST00000316105 SUMO2P61956 95 aaKnown RBP10.37□□□□□ -0.75
PCDHB9-201ENST00000316105 GAGE13Q4V321 117 aa10.37□□□□□ -0.75
PCDHB9-201ENST00000316105 STHQ8IWL8 128 aa10.37□□□□□ -0.75
PCDHB9-201ENST00000316105 TRAV12-2A0A075B6T6 113 aa10.36□□□□□ -0.75
PCDHB9-201ENST00000316105 DEFB131AP59861 70 aa10.36□□□□□ -0.75
PCDHB9-201ENST00000316105 RBX1P62877 108 aa10.36□□□□□ -0.75
PCDHB9-201ENST00000316105 MRPL53Q96EL3 112 aaKnown RBP10.36□□□□□ -0.75
PCDHB9-201ENST00000316105 Q96MF0 132 aa10.36□□□□□ -0.75
PCDHB9-201ENST00000316105 CCDC140Q96MF4 163 aa10.36□□□□□ -0.75
PCDHB9-201ENST00000316105 AJUBAQ96IF1 538 aa10.36□□□□□ -0.75
PCDHB9-201ENST00000316105 TSSC4Q9Y5U2 329 aaPredicted RBP10.36□□□□□ -0.75
PCDHB9-201ENST00000316105 LGALS9BQ3B8N2 356 aa10.36□□□□□ -0.75
PCDHB9-201ENST00000316105 LGALS9CQ6DKI2 356 aa10.36□□□□□ -0.75
PCDHB9-201ENST00000316105 ADAMTSL5Q6ZMM2 481 aa10.36□□□□□ -0.75
PCDHB9-201ENST00000316105 VCX2Q9H322 139 aa10.36□□□□□ -0.75
PCDHB9-201ENST00000316105 EYSQ5T1H1 3165 aa10.35□□□□□ -0.75
PCDHB9-201ENST00000316105 ZNF815PA8K554 130 aa10.35□□□□□ -0.75
PCDHB9-201ENST00000316105 J3QLI3 93 aa10.35□□□□□ -0.75
PCDHB9-201ENST00000316105 C16orf54Q6UWD8 224 aa10.35□□□□□ -0.75
PCDHB9-201ENST00000316105 ATP6V0BQ99437 205 aa10.35□□□□□ -0.75
PCDHB9-201ENST00000316105 KLK9Q9UKQ9 250 aa10.35□□□□□ -0.75
PCDHB9-201ENST00000316105 AZU1P20160 251 aa10.35□□□□□ -0.75
PCDHB9-201ENST00000316105 PLNP26678 52 aa10.35□□□□□ -0.75
PCDHB9-201ENST00000316105 EBI3Q14213 229 aa10.35□□□□□ -0.75
PCDHB9-201ENST00000316105 VCYO14598 125 aa10.35□□□□□ -0.75
PCDHB9-201ENST00000316105 TRBV12-3P01733 135 aa10.35□□□□□ -0.75
PCDHB9-201ENST00000316105 SAP30O75446 220 aa10.34□□□□□ -0.75
PCDHB9-201ENST00000316105 DEFB1P60022 68 aa10.34□□□□□ -0.75
PCDHB9-201ENST00000316105 ZNF876PQ49A33 203 aa10.34□□□□□ -0.75
PCDHB9-201ENST00000316105 UBE2L6O14933 153 aa10.34□□□□□ -0.75
PCDHB9-201ENST00000316105 UNQ9165/PRO28630Q6UXU0 137 aa10.34□□□□□ -0.75
PCDHB9-201ENST00000316105 SETD2Q9BYW2 2564 aaPredicted RBP10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms