RNA–Protein interactions for RNA: ENST00000315585.11

CHFR-202, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 2,446 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-202ENST00000315585 VAMP3Q15836 100 aa11.35□□□□□ -0.59
CHFR-202ENST00000315585 C11orf21Q9P2W6 132 aa11.35□□□□□ -0.59
CHFR-202ENST00000315585 UFC1Q9Y3C8 167 aa11.35□□□□□ -0.59
CHFR-202ENST00000315585 FAM208BQ5VWN6 2430 aa11.35□□□□□ -0.59
CHFR-202ENST00000315585 A6NDN8 102 aa11.34□□□□□ -0.59
CHFR-202ENST00000315585 K7EMT4 169 aa11.34□□□□□ -0.59
CHFR-202ENST00000315585 S100A4P26447 101 aaKnown RBP11.34□□□□□ -0.59
CHFR-202ENST00000315585 RPL11P62913 178 aaKnown RBP11.34□□□□□ -0.59
CHFR-202ENST00000315585 LAGE3Q14657 143 aa11.34□□□□□ -0.59
CHFR-202ENST00000315585 TMEM97Q5BJF2 176 aa11.34□□□□□ -0.59
CHFR-202ENST00000315585 TEX29Q8N6K0 151 aa11.34□□□□□ -0.59
CHFR-202ENST00000315585 DAZ1Q9NQZ3 744 aaKnown RBP11.34□□□□□ -0.59
CHFR-202ENST00000315585 SMAD7O15105 426 aaKnown RBP11.34□□□□□ -0.59
CHFR-202ENST00000315585 ID1P41134 155 aa11.34□□□□□ -0.59
CHFR-202ENST00000315585 ASIPP42127 132 aa11.34□□□□□ -0.59
CHFR-202ENST00000315585 DEFB112Q30KQ8 113 aa11.34□□□□□ -0.59
CHFR-202ENST00000315585 UNQ9165/PRO28630Q6UXU0 137 aa11.34□□□□□ -0.59
CHFR-202ENST00000315585 MAPK1IP1LQ8NDC0 245 aa11.34□□□□□ -0.59
CHFR-202ENST00000315585 COL12A1Q99715 3063 aa11.33□□□□□ -0.6
CHFR-202ENST00000315585 SPG11Q96JI7 2443 aa11.33□□□□□ -0.6
CHFR-202ENST00000315585 SOCS3O14543 225 aa11.33□□□□□ -0.6
CHFR-202ENST00000315585 IGLV1-40P01703 118 aa11.33□□□□□ -0.6
CHFR-202ENST00000315585 FOXE3Q13461 319 aa11.33□□□□□ -0.6
CHFR-202ENST00000315585 ANKRD39Q53RE8 183 aa11.33□□□□□ -0.6
CHFR-202ENST00000315585 PEF1Q9UBV8 284 aaKnown RBP11.33□□□□□ -0.6
CHFR-202ENST00000315585 FSHBP01225 129 aa11.32□□□□□ -0.6
CHFR-202ENST00000315585 FGF6P10767 208 aa11.32□□□□□ -0.6
CHFR-202ENST00000315585 HSD52Q0P140 79 aa11.32□□□□□ -0.6
CHFR-202ENST00000315585 C2orf91Q6ZV80 131 aa11.32□□□□□ -0.6
CHFR-202ENST00000315585 OR4C5Q8NGB2 326 aa11.32□□□□□ -0.6
CHFR-202ENST00000315585 TMEM89A2RUT3 159 aa11.31□□□□□ -0.6
CHFR-202ENST00000315585 TAX1BP3O14907 124 aa11.31□□□□□ -0.6
CHFR-202ENST00000315585 FXYD7P58549 80 aa11.31□□□□□ -0.6
CHFR-202ENST00000315585 ZFAND2AQ8N6M9 145 aa11.31□□□□□ -0.6
CHFR-202ENST00000315585 TMEM158Q8WZ71 300 aa11.31□□□□□ -0.6
CHFR-202ENST00000315585 C20orf173Q96LM9 149 aa11.31□□□□□ -0.6
CHFR-202ENST00000315585 C18orf15Q96N68 181 aa11.31□□□□□ -0.6
CHFR-202ENST00000315585 C20orf78Q9BR46 151 aa11.31□□□□□ -0.6
CHFR-202ENST00000315585 RHPN1-AS1Q9BWJ2 59 aa11.31□□□□□ -0.6
CHFR-202ENST00000315585 ZMAT4Q9H898 229 aa11.31□□□□□ -0.6
CHFR-202ENST00000315585 PHLDA3Q9Y5J5 127 aa11.31□□□□□ -0.6
CHFR-202ENST00000315585 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.31□□□□□ -0.62e-6■■■■□ 21.7
CHFR-202ENST00000315585 IGLV2-18A0A075B6J9 118 aa11.31□□□□□ -0.6
CHFR-202ENST00000315585 H3BVH4 76 aa11.31□□□□□ -0.6
CHFR-202ENST00000315585 CCL25O15444 150 aa11.31□□□□□ -0.6
CHFR-202ENST00000315585 IGKCP01834 107 aa11.31□□□□□ -0.6
CHFR-202ENST00000315585 SMIM17P0DL12 118 aa11.31□□□□□ -0.6
CHFR-202ENST00000315585 ORMDL2Q53FV1 153 aa11.31□□□□□ -0.6
CHFR-202ENST00000315585 APRG1Q8IVJ8 170 aa11.31□□□□□ -0.6
CHFR-202ENST00000315585 NRACQ8N912 160 aa11.31□□□□□ -0.6
CHFR-202ENST00000315585 DPH3P1Q9H4G8 78 aa11.31□□□□□ -0.6
CHFR-202ENST00000315585 DPM2O94777 84 aa11.3□□□□□ -0.6
CHFR-202ENST00000315585 TRBV12-3P01733 135 aa11.3□□□□□ -0.6
CHFR-202ENST00000315585 BLCAPP62952 87 aa11.3□□□□□ -0.6
CHFR-202ENST00000315585 IGHV3-11P01762 117 aa11.3□□□□□ -0.6
CHFR-202ENST00000315585 IGHV4-59P01825 116 aa11.3□□□□□ -0.6
CHFR-202ENST00000315585 KIR3DS1Q14943 382 aa11.3□□□□□ -0.6
CHFR-202ENST00000315585 ODF1Q14990 250 aa11.3□□□□□ -0.6
CHFR-202ENST00000315585 GPHB5Q86YW7 130 aa11.3□□□□□ -0.6
CHFR-202ENST00000315585 AP1S3Q96PC3 154 aa11.3□□□□□ -0.6
CHFR-202ENST00000315585 NMUP48645 174 aa11.29□□□□□ -0.6
CHFR-202ENST00000315585 TM4SF20Q53R12 229 aa11.29□□□□□ -0.6
CHFR-202ENST00000315585 FAM19A4Q96LR4 140 aa11.29□□□□□ -0.6
CHFR-202ENST00000315585 LRRK2Q5S007 2527 aa11.29□□□□□ -0.6
CHFR-202ENST00000315585 LINC01549A6NIU2 74 aa11.29□□□□□ -0.6
CHFR-202ENST00000315585 M0R381 172 aa11.29□□□□□ -0.6
CHFR-202ENST00000315585 Q6YL49 198 aa11.29□□□□□ -0.6
CHFR-202ENST00000315585 KLK15Q9H2R5 256 aa11.29□□□□□ -0.6
CHFR-202ENST00000315585 DKK2Q9UBU2 259 aa11.29□□□□□ -0.6
CHFR-202ENST00000315585 VPREB3Q9UKI3 123 aa11.29□□□□□ -0.6
CHFR-202ENST00000315585 CBY1Q9Y3M2 126 aa11.29□□□□□ -0.6
CHFR-202ENST00000315585 HLA-DRB4P13762 266 aa11.28□□□□□ -0.6
CHFR-202ENST00000315585 TP73-AS1Q9UF72 201 aa11.28□□□□□ -0.6
CHFR-202ENST00000315585 HLA-DRB4X5D2U9 266 aa11.28□□□□□ -0.6
CHFR-202ENST00000315585 ANKRD17O75179 2603 aaKnown RBP11.28□□□□□ -0.6
CHFR-202ENST00000315585 GATA1P15976 413 aaPredicted RBP11.28□□□□□ -0.6
CHFR-202ENST00000315585 CFHR3Q02985 330 aa11.28□□□□□ -0.6
CHFR-202ENST00000315585 KRTAP1-3Q8IUG1 177 aa11.28□□□□□ -0.6
CHFR-202ENST00000315585 FOXC2Q99958 501 aa11.28□□□□□ -0.6
CHFR-202ENST00000315585 SMIM2Q9BVW6 85 aa11.28□□□□□ -0.6
CHFR-202ENST00000315585 HIGD1BQ9P298 99 aa11.28□□□□□ -0.6
CHFR-202ENST00000315585 C7orf71A4D174 169 aa11.27□□□□□ -0.6
CHFR-202ENST00000315585 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.27□□□□□ -0.6
CHFR-202ENST00000315585 GAS8-AS1O95177 125 aa11.27□□□□□ -0.6
CHFR-202ENST00000315585 PLNP26678 52 aa11.27□□□□□ -0.6
CHFR-202ENST00000315585 H3BRM9 83 aa11.27□□□□□ -0.61
CHFR-202ENST00000315585 RNASE4P34096 147 aaKnown RBP11.27□□□□□ -0.61
CHFR-202ENST00000315585 SUMO2P61956 95 aaKnown RBP11.27□□□□□ -0.61
CHFR-202ENST00000315585 PRR9Q5T870 116 aa11.27□□□□□ -0.61
CHFR-202ENST00000315585 WFDC3Q8IUB2 231 aa11.27□□□□□ -0.61
CHFR-202ENST00000315585 HHLA3Q9XRX5 114 aa11.26□□□□□ -0.61
CHFR-202ENST00000315585 CR1P17927 2039 aa11.26□□□□□ -0.61
CHFR-202ENST00000315585 K7EP13 123 aa11.26□□□□□ -0.61
CHFR-202ENST00000315585 ANXA2RQ3ZCQ2 193 aa11.26□□□□□ -0.61
CHFR-202ENST00000315585 Q6ZVH6 145 aa11.26□□□□□ -0.61
CHFR-202ENST00000315585 A0A087WX48 190 aa11.25□□□□□ -0.61
CHFR-202ENST00000315585 TRAV12-1A0A0B4J245 112 aa11.25□□□□□ -0.61
CHFR-202ENST00000315585 CBY3A6NI87 242 aa11.25□□□□□ -0.61
CHFR-202ENST00000315585 FAM159AQ6UWV7 190 aa11.25□□□□□ -0.61
CHFR-202ENST00000315585 TRAV26-2A0A0B4J265 109 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms