RNA–Protein interactions for RNA: ENST00000314759.5

SKA3-202, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SKA3, Length 2,919 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-202ENST00000314759 HRNRQ86YZ3 2850 aaPredicted RBP10.29□□□□□ -0.76
SKA3-202ENST00000314759 TRBV7-3A0A075B6L6 115 aa10.29□□□□□ -0.76
SKA3-202ENST00000314759 CCDC140Q96MF4 163 aa10.29□□□□□ -0.76
SKA3-202ENST00000314759 NBASA2RRP1 2371 aa10.28□□□□□ -0.76
SKA3-202ENST00000314759 ZFP36P26651 326 aaKnown RBP10.28□□□□□ -0.76
SKA3-202ENST00000314759 MINOS1Q5TGZ0 78 aa10.28□□□□□ -0.76
SKA3-202ENST00000314759 MORN3Q6PF18 240 aaPredicted RBP10.28□□□□□ -0.76
SKA3-202ENST00000314759 CLEC19AQ6UXS0 136 aa10.28□□□□□ -0.76
SKA3-202ENST00000314759 C1orf122Q6ZSJ8 110 aa10.28□□□□□ -0.76
SKA3-202ENST00000314759 MINOS1-NBL1R4GNA1 71 aa10.28□□□□□ -0.76
SKA3-202ENST00000314759 ATP6V0E1O15342 81 aa10.28□□□□□ -0.76
SKA3-202ENST00000314759 SPANXN1Q5VSR9 72 aa10.28□□□□□ -0.76
SKA3-202ENST00000314759 SFTA2Q6UW10 78 aa10.28□□□□□ -0.76
SKA3-202ENST00000314759 IGHV4-4A0A075B6R2 117 aa10.27□□□□□ -0.76
SKA3-202ENST00000314759 SMCPP49901 116 aaPredicted RBP10.27□□□□□ -0.76
SKA3-202ENST00000314759 TAL2Q16559 108 aa10.27□□□□□ -0.76
SKA3-202ENST00000314759 C8orf86Q6ZUL3 223 aa10.27□□□□□ -0.76
SKA3-202ENST00000314759 SVIPQ8NHG7 77 aa10.27□□□□□ -0.76
SKA3-202ENST00000314759 CYSLTR1Q9Y271 337 aa10.27□□□□□ -0.76
SKA3-202ENST00000314759 PLNP26678 52 aa10.27□□□□□ -0.77
SKA3-202ENST00000314759 CDSNQ15517 529 aa10.27□□□□□ -0.77
SKA3-202ENST00000314759 CEP295Q9C0D2 2601 aa10.27□□□□□ -0.77
SKA3-202ENST00000314759 G3V318 75 aa10.27□□□□□ -0.77
SKA3-202ENST00000314759 APOMO95445 188 aa10.27□□□□□ -0.77
SKA3-202ENST00000314759 C9orf47Q6ZRZ4 202 aa10.27□□□□□ -0.77
SKA3-202ENST00000314759 LINC01548A6NM66 108 aa10.26□□□□□ -0.77
SKA3-202ENST00000314759 H3BVH4 76 aa10.26□□□□□ -0.77
SKA3-202ENST00000314759 FBXL19-AS1Q494R0 122 aa10.26□□□□□ -0.77
SKA3-202ENST00000314759 NFE4Q86UQ8 179 aa10.26□□□□□ -0.77
SKA3-202ENST00000314759 CRYBA4P53673 196 aa10.26□□□□□ -0.77
SKA3-202ENST00000314759 KLK9Q2XQG4 91 aa10.26□□□□□ -0.77
SKA3-202ENST00000314759 PRR9Q5T870 116 aa10.26□□□□□ -0.77
SKA3-202ENST00000314759 SYT8Q8NBV8 401 aa10.26□□□□□ -0.77
SKA3-202ENST00000314759 KLK15Q9H2R5 256 aa10.26□□□□□ -0.77
SKA3-202ENST00000314759 CDIP1Q9H305 208 aa10.26□□□□□ -0.77
SKA3-202ENST00000314759 KLK9Q9UKQ9 250 aa10.26□□□□□ -0.77
SKA3-202ENST00000314759 FOXI1Q12951 378 aa10.25□□□□□ -0.77
SKA3-202ENST00000314759 FHL3Q13643 280 aa10.25□□□□□ -0.77
SKA3-202ENST00000314759 C11orf71Q6IPW1 123 aa10.25□□□□□ -0.77
SKA3-202ENST00000314759 SMIM2Q9BVW6 85 aa10.25□□□□□ -0.77
SKA3-202ENST00000314759 H7C1H1 209 aa10.25□□□□□ -0.77
SKA3-202ENST00000314759 TCTEX1D4Q5JR98 221 aa10.25□□□□□ -0.77
SKA3-202ENST00000314759 MRPL53Q96EL3 112 aaKnown RBP10.25□□□□□ -0.77
SKA3-202ENST00000314759 AJUBAQ96IF1 538 aa10.25□□□□□ -0.77
SKA3-202ENST00000314759 METTL26Q96S19 204 aa10.25□□□□□ -0.77
SKA3-202ENST00000314759 GEMIN7Q9H840 131 aaKnown RBP10.25□□□□□ -0.77
SKA3-202ENST00000314759 PGPEP1Q9NXJ5 209 aa10.25□□□□□ -0.77
SKA3-202ENST00000314759 TRAV12-1A0A0B4J245 112 aa10.24□□□□□ -0.77
SKA3-202ENST00000314759 F8VRH5 84 aa10.24□□□□□ -0.77
SKA3-202ENST00000314759 SPRY2O43597 315 aa10.24□□□□□ -0.77
SKA3-202ENST00000314759 IGF1P05019 195 aa10.24□□□□□ -0.77
SKA3-202ENST00000314759 SCGB2A2Q13296 93 aa10.24□□□□□ -0.77
SKA3-202ENST00000314759 MRAP2Q96G30 205 aa10.24□□□□□ -0.77
SKA3-202ENST00000314759 HIF1ANQ9NWT6 349 aa10.24□□□□□ -0.77
SKA3-202ENST00000314759 ZFHX3Q15911 3703 aa10.24□□□□□ -0.77
SKA3-202ENST00000314759 MYMXA0A1B0GTQ4 84 aa10.24□□□□□ -0.77
SKA3-202ENST00000314759 HOXA3O43365 443 aaPredicted RBP10.24□□□□□ -0.77
SKA3-202ENST00000314759 GLMPQ8WWB7 406 aa10.24□□□□□ -0.77
SKA3-202ENST00000314759 PTH2Q96A98 100 aa10.24□□□□□ -0.77
SKA3-202ENST00000314759 SIRPDQ9H106 197 aa10.24□□□□□ -0.77
SKA3-202ENST00000314759 MT-ATP8P03928 68 aa10.23□□□□□ -0.77
SKA3-202ENST00000314759 PTPRZ1P23471 2315 aaPredicted RBP10.23□□□□□ -0.77
SKA3-202ENST00000314759 PTPRQQ9UMZ3 2332 aa10.23□□□□□ -0.77
SKA3-202ENST00000314759 CFAP126Q5VTH2 177 aa10.23□□□□□ -0.77
SKA3-202ENST00000314759 ZFP2Q6ZN57 461 aa10.23□□□□□ -0.77
SKA3-202ENST00000314759 U3KQE9 123 aa10.23□□□□□ -0.77
SKA3-202ENST00000314759 SPTBN1Q01082 2364 aaKnown RBP10.23□□□□□ -0.77
SKA3-202ENST00000314759 J3KRW8 73 aa10.23□□□□□ -0.77
SKA3-202ENST00000314759 LGALS1P09382 135 aaKnown RBP10.23□□□□□ -0.77
SKA3-202ENST00000314759 EEF1AKMT3Q96AZ1 226 aa10.23□□□□□ -0.77
SKA3-202ENST00000314759 SCGB3A1Q96QR1 104 aa10.23□□□□□ -0.77
SKA3-202ENST00000314759 OR11H12B2RN74 326 aa10.22□□□□□ -0.77
SKA3-202ENST00000314759 OR11H1Q8NG94 326 aa10.22□□□□□ -0.77
SKA3-202ENST00000314759 OR11H2Q8NH07 326 aa10.22□□□□□ -0.77
SKA3-202ENST00000314759 RASL10AQ92737 203 aa10.22□□□□□ -0.77
SKA3-202ENST00000314759 TOMM6Q96B49 74 aa10.22□□□□□ -0.77
SKA3-202ENST00000314759 C16orf92Q96LL3 132 aa10.22□□□□□ -0.77
SKA3-202ENST00000314759 C1QTNF4Q9BXJ3 329 aa10.22□□□□□ -0.77
SKA3-202ENST00000314759 MRPL16Q9NX20 251 aaKnown RBP10.22□□□□□ -0.77
SKA3-202ENST00000314759 LINC01549A6NIU2 74 aa10.22□□□□□ -0.77
SKA3-202ENST00000314759 M0R381 172 aa10.22□□□□□ -0.77
SKA3-202ENST00000314759 CCL21O00585 134 aa10.22□□□□□ -0.77
SKA3-202ENST00000314759 SPINK8P0C7L1 97 aa10.22□□□□□ -0.77
SKA3-202ENST00000314759 SUMO2P61956 95 aaKnown RBP10.22□□□□□ -0.77
SKA3-202ENST00000314759 NEXN-AS1Q8NBZ9 246 aa10.22□□□□□ -0.77
SKA3-202ENST00000314759 C20orf173Q96LM9 149 aa10.22□□□□□ -0.77
SKA3-202ENST00000314759 TRBV7-1A0A0A6YYK4 115 aa10.21□□□□□ -0.77
SKA3-202ENST00000314759 PSMB2P49721 201 aa10.21□□□□□ -0.77
SKA3-202ENST00000314759 TCF15Q12870 199 aa10.21□□□□□ -0.77
SKA3-202ENST00000314759 ORMDL2Q53FV1 153 aa10.21□□□□□ -0.77
SKA3-202ENST00000314759 ZNF418Q8TF45 676 aaPredicted RBP10.21□□□□□ -0.77
SKA3-202ENST00000314759 RPL39LQ96EH5 51 aaKnown RBP10.21□□□□□ -0.77
SKA3-202ENST00000314759 PLEKHB2Q96CS7 222 aa10.21□□□□□ -0.78
SKA3-202ENST00000314759 PRSS29PA6NIE9 313 aa10.2□□□□□ -0.78
SKA3-202ENST00000314759 LINC01619G3V211 115 aa10.2□□□□□ -0.78
SKA3-202ENST00000314759 SAA4P35542 130 aa10.2□□□□□ -0.78
SKA3-202ENST00000314759 XGP55808 180 aa10.2□□□□□ -0.78
SKA3-202ENST00000314759 LOC107984156A0A0G2JMH3 177 aa10.2□□□□□ -0.78
SKA3-202ENST00000314759 UBE2E1P51965 193 aa10.2□□□□□ -0.78
SKA3-202ENST00000314759 ARL17AQ8IVW1 177 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 184.1 ms