RNA–Protein interactions for RNA: ENST00000312413.10

CLCN6-201, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 2 BASIC

Gene CLCN6, Length 5,631 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-201ENST00000312413 SIPA1L1O43166 1804 aa10.81□□□□□ -0.68
CLCN6-201ENST00000312413 IGHV7-4-1A0A0J9YVY3 117 aa10.81□□□□□ -0.68
CLCN6-201ENST00000312413 WISP1O95388 367 aa10.81□□□□□ -0.68
CLCN6-201ENST00000312413 DYNAPQ8N1N2 210 aa10.8□□□□□ -0.68
CLCN6-201ENST00000312413 AGPAT4-IT1Q9H0P7 198 aa10.8□□□□□ -0.68
CLCN6-201ENST00000312413 CR1LQ2VPA4 569 aa10.8□□□□□ -0.68
CLCN6-201ENST00000312413 ANKRD39Q53RE8 183 aa10.8□□□□□ -0.68
CLCN6-201ENST00000312413 NUPR1O60356 82 aa10.8□□□□□ -0.68
CLCN6-201ENST00000312413 IGLV3-1P01715 115 aa10.8□□□□□ -0.68
CLCN6-201ENST00000312413 ANGP03950 147 aaKnown RBP10.79□□□□□ -0.68
CLCN6-201ENST00000312413 RNASE8Q8TDE3 154 aaKnown RBP10.79□□□□□ -0.68
CLCN6-201ENST00000312413 LENEPQ9Y5L5 61 aa10.79□□□□□ -0.68
CLCN6-201ENST00000312413 ZNF503-AS2A6NEH8 195 aa10.79□□□□□ -0.68
CLCN6-201ENST00000312413 PRSS47A8MTI9 375 aa10.79□□□□□ -0.68
CLCN6-201ENST00000312413 HERV-K104P63124 156 aa10.79□□□□□ -0.68
CLCN6-201ENST00000312413 DIAPH2-AS1Q14236 149 aa10.79□□□□□ -0.68
CLCN6-201ENST00000312413 TEN1Q86WV5 123 aa10.79□□□□□ -0.68
CLCN6-201ENST00000312413 TDRG1Q3Y452 100 aa10.79□□□□□ -0.68
CLCN6-201ENST00000312413 SLC25A29Q8N8R3 303 aa10.79□□□□□ -0.68
CLCN6-201ENST00000312413 RBAKDNA6NC62 111 aa10.78□□□□□ -0.68
CLCN6-201ENST00000312413 PRB2P02812 416 aaPredicted RBP10.78□□□□□ -0.68
CLCN6-201ENST00000312413 GNRH2O43555 120 aa10.78□□□□□ -0.68
CLCN6-201ENST00000312413 NDUFC2O95298 119 aa10.78□□□□□ -0.68
CLCN6-201ENST00000312413 GATA1P15976 413 aaPredicted RBP10.78□□□□□ -0.68
CLCN6-201ENST00000312413 FOXE3Q13461 319 aa10.78□□□□□ -0.68
CLCN6-201ENST00000312413 UNQ6494/PRO21346Q6UXR6 183 aa10.78□□□□□ -0.68
CLCN6-201ENST00000312413 PROK2Q9HC23 129 aa10.78□□□□□ -0.68
CLCN6-201ENST00000312413 NBASA2RRP1 2371 aa10.78□□□□□ -0.68
CLCN6-201ENST00000312413 ATOX1O00244 68 aa10.78□□□□□ -0.68
CLCN6-201ENST00000312413 ZNF524Q96C55 264 aa10.78□□□□□ -0.68
CLCN6-201ENST00000312413 DOCK8Q8NF50 2099 aa10.77□□□□□ -0.68
CLCN6-201ENST00000312413 F6UB75 175 aa10.77□□□□□ -0.68
CLCN6-201ENST00000312413 RIF1Q5UIP0 2472 aaKnown RBP10.77□□□□□ -0.69
CLCN6-201ENST00000312413 LINC00173Q6ZV60 143 aa10.77□□□□□ -0.69
CLCN6-201ENST00000312413 LTBP1Q14766 1721 aa10.77□□□□□ -0.69
CLCN6-201ENST00000312413 SHANK1Q9Y566 2161 aa10.77□□□□□ -0.69
CLCN6-201ENST00000312413 THADAQ6YHU6 1953 aa10.76□□□□□ -0.69
CLCN6-201ENST00000312413 A0A0B4J2C4 111 aa10.76□□□□□ -0.69
CLCN6-201ENST00000312413 IGLV1-44P01699 117 aa10.76□□□□□ -0.69
CLCN6-201ENST00000312413 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.76□□□□□ -0.69
CLCN6-201ENST00000312413 IGKV2-29A2NJV5 120 aaPredicted RBP10.76□□□□□ -0.69
CLCN6-201ENST00000312413 ATRXP46100 2492 aa10.76□□□□□ -0.69
CLCN6-201ENST00000312413 A4D1N5 150 aa10.76□□□□□ -0.69
CLCN6-201ENST00000312413 WFDC2Q14508 124 aa10.76□□□□□ -0.69
CLCN6-201ENST00000312413 Q8NFD4 153 aa10.76□□□□□ -0.69
CLCN6-201ENST00000312413 H0YGX0 51 aa10.76□□□□□ -0.69
CLCN6-201ENST00000312413 XCL1P47992 114 aa10.76□□□□□ -0.69
CLCN6-201ENST00000312413 CLPSL2Q6UWE3 100 aa10.76□□□□□ -0.69
CLCN6-201ENST00000312413 SVIPQ8NHG7 77 aa10.76□□□□□ -0.69
CLCN6-201ENST00000312413 RNF223E7ERA6 249 aa10.75□□□□□ -0.69
CLCN6-201ENST00000312413 LINC01620Q4KN68 170 aa10.75□□□□□ -0.69
CLCN6-201ENST00000312413 A0A1B0GX51 115 aa10.75□□□□□ -0.69
CLCN6-201ENST00000312413 RMI2Q96E14 147 aa10.75□□□□□ -0.69
CLCN6-201ENST00000312413 IGF2BP2-AS1Q96M15 143 aa10.75□□□□□ -0.69
CLCN6-201ENST00000312413 FAM236AA0A1B0GUQ0 79 aa10.75□□□□□ -0.69
CLCN6-201ENST00000312413 FAM236BA0A1B0GV22 79 aa10.75□□□□□ -0.69
CLCN6-201ENST00000312413 IGHG2P01859 326 aa10.75□□□□□ -0.69
CLCN6-201ENST00000312413 MUSTN1Q8IVN3 82 aa10.75□□□□□ -0.69
CLCN6-201ENST00000312413 ICOSQ9Y6W8 199 aa10.75□□□□□ -0.69
CLCN6-201ENST00000312413 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.75□□□□□ -0.699e-10■■■■□ 21.5
CLCN6-201ENST00000312413 FXYD2P54710 66 aa10.75□□□□□ -0.69
CLCN6-201ENST00000312413 HIGD1BQ9P298 99 aa10.74□□□□□ -0.69
CLCN6-201ENST00000312413 A0A096LPF7 62 aa10.74□□□□□ -0.69
CLCN6-201ENST00000312413 CHKB-CPT1BH3BT56 60 aa10.74□□□□□ -0.69
CLCN6-201ENST00000312413 KAAG1Q9UBP8 84 aa10.74□□□□□ -0.69
CLCN6-201ENST00000312413 J3KT08 172 aa10.74□□□□□ -0.69
CLCN6-201ENST00000312413 APOC4P55056 127 aa10.74□□□□□ -0.69
CLCN6-201ENST00000312413 C8orf31Q8N9H6 132 aa10.74□□□□□ -0.69
CLCN6-201ENST00000312413 TAX1BP3O14907 124 aa10.73□□□□□ -0.69
CLCN6-201ENST00000312413 ZFP2Q6ZN57 461 aa10.73□□□□□ -0.69
CLCN6-201ENST00000312413 WFDC9Q8NEX5 89 aa10.73□□□□□ -0.69
CLCN6-201ENST00000312413 ZNF407Q9C0G0 2248 aa10.73□□□□□ -0.69
CLCN6-201ENST00000312413 H3BUA1 57 aa10.73□□□□□ -0.69
CLCN6-201ENST00000312413 TRAV4A0A0B4J268 109 aa10.73□□□□□ -0.69
CLCN6-201ENST00000312413 ELANEP08246 267 aa10.73□□□□□ -0.69
CLCN6-201ENST00000312413 FUSP35637 526 aaKnown RBP eCLIP10.73□□□□□ -0.69
CLCN6-201ENST00000312413 RPL39LQ96EH5 51 aaKnown RBP10.73□□□□□ -0.69
CLCN6-201ENST00000312413 U3KQE9 123 aa10.73□□□□□ -0.69
CLCN6-201ENST00000312413 IGKV3D-7A0A0C4DH55 119 aa10.72□□□□□ -0.69
CLCN6-201ENST00000312413 FOXI1Q12951 378 aa10.72□□□□□ -0.69
CLCN6-201ENST00000312413 ARTNQ5T4W7 220 aa10.72□□□□□ -0.69
CLCN6-201ENST00000312413 GP9P14770 177 aa10.72□□□□□ -0.69
CLCN6-201ENST00000312413 A0A0J9YXV3 536 aa10.72□□□□□ -0.69
CLCN6-201ENST00000312413 CGB3P0DN86 165 aa10.72□□□□□ -0.69
CLCN6-201ENST00000312413 SND1-IT1Q9HBX3 110 aa10.72□□□□□ -0.69
CLCN6-201ENST00000312413 PSMB8P28062 276 aa10.71□□□□□ -0.69
CLCN6-201ENST00000312413 DEFB105AQ8NG35 78 aa10.71□□□□□ -0.69
CLCN6-201ENST00000312413 CGB7P0DN87 165 aa10.71□□□□□ -0.69
CLCN6-201ENST00000312413 PLA2G2EQ9NZK7 142 aa10.71□□□□□ -0.69
CLCN6-201ENST00000312413 C5orf38Q86SI9 138 aa10.71□□□□□ -0.7
CLCN6-201ENST00000312413 SPRY2O43597 315 aa10.71□□□□□ -0.7
CLCN6-201ENST00000312413 MSRB1Q9NZV6 116 aa10.71□□□□□ -0.7
CLCN6-201ENST00000312413 HEATR5AQ86XA9 2040 aa10.71□□□□□ -0.7
CLCN6-201ENST00000312413 LHBP01229 141 aa10.7□□□□□ -0.7
CLCN6-201ENST00000312413 NOP10Q9NPE3 64 aaKnown RBP10.7□□□□□ -0.7
CLCN6-201ENST00000312413 PRR30Q53SZ7 412 aaPredicted RBP10.7□□□□□ -0.7
CLCN6-201ENST00000312413 C3orf56Q8N813 242 aa10.7□□□□□ -0.7
CLCN6-201ENST00000312413 MAPK1IP1LQ8NDC0 245 aa10.7□□□□□ -0.7
CLCN6-201ENST00000312413 BAALCQ8WXS3 180 aa10.69□□□□□ -0.7
CLCN6-201ENST00000312413 OPRPNQ99935 248 aaPredicted RBP10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms