RNA–Protein interactions for RNA: ENST00000312196.8

MSL3-201, Transcript of MSL complex subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSL3, Length 2,345 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3-201ENST00000312196 TNFSF18Q9UNG2 199 aa5.79□□□□□ -1.48
MSL3-201ENST00000312196 KIAA1109Q2LD37 5005 aa5.79□□□□□ -1.48
MSL3-201ENST00000312196 TRAV9-2A0A087WT02 112 aa5.79□□□□□ -1.48
MSL3-201ENST00000312196 TRBV6-1A0A0K0K1D8 114 aa5.79□□□□□ -1.48
MSL3-201ENST00000312196 A0A1W2PPV4 95 aa5.79□□□□□ -1.48
MSL3-201ENST00000312196 M0R2P5 195 aa5.79□□□□□ -1.48
MSL3-201ENST00000312196 TNP2Q05952 138 aa5.79□□□□□ -1.48
MSL3-201ENST00000312196 FAM122CQ6P4D5 195 aa5.79□□□□□ -1.48
MSL3-201ENST00000312196 Q6ZRN7 208 aaPredicted RBP5.79□□□□□ -1.48
MSL3-201ENST00000312196 C5orf17Q8NAS9 161 aa5.79□□□□□ -1.48
MSL3-201ENST00000312196 CMTM2Q8TAZ6 248 aa5.79□□□□□ -1.48
MSL3-201ENST00000312196 IGHV3-16A0A0C4DH30 117 aa5.78□□□□□ -1.48
MSL3-201ENST00000312196 K7EQM0 130 aa5.78□□□□□ -1.48
MSL3-201ENST00000312196 SIVA1O15304 175 aa5.78□□□□□ -1.48
MSL3-201ENST00000312196 HTN1P15515 57 aa5.78□□□□□ -1.48
MSL3-201ENST00000312196 COTL1Q14019 142 aa5.78□□□□□ -1.48
MSL3-201ENST00000312196 LYPD5Q6UWN5 251 aa5.78□□□□□ -1.48
MSL3-201ENST00000312196 FAM159AQ6UWV7 190 aa5.78□□□□□ -1.48
MSL3-201ENST00000312196 OR10G9Q8NGN4 311 aa5.78□□□□□ -1.48
MSL3-201ENST00000312196 OR10G7Q8NGN6 311 aa5.78□□□□□ -1.48
MSL3-201ENST00000312196 NKX6-2Q9C056 277 aaPredicted RBP5.78□□□□□ -1.48
MSL3-201ENST00000312196 PGPEP1Q9NXJ5 209 aa5.78□□□□□ -1.48
MSL3-201ENST00000312196 HHLA3Q9XRX5 114 aa5.78□□□□□ -1.48
MSL3-201ENST00000312196 ARL2-SNX15V9GYD0 113 aa5.78□□□□□ -1.48
MSL3-201ENST00000312196 PGPA6NDG6 321 aa5.77□□□□□ -1.49
MSL3-201ENST00000312196 HSBP1L1C9JCN9 74 aa5.77□□□□□ -1.49
MSL3-201ENST00000312196 RS1O15537 224 aa5.77□□□□□ -1.49
MSL3-201ENST00000312196 DNAH10OSP0CZ25 163 aa5.77□□□□□ -1.49
MSL3-201ENST00000312196 RANP62826 216 aaKnown RBP5.77□□□□□ -1.49
MSL3-201ENST00000312196 LINC01559Q495D7 138 aa5.77□□□□□ -1.49
MSL3-201ENST00000312196 NEGR1Q7Z3B1 354 aa5.77□□□□□ -1.49
MSL3-201ENST00000312196 TMEM75Q8N9X5 138 aa5.77□□□□□ -1.49
MSL3-201ENST00000312196 TXNDC17Q9BRA2 123 aa5.77□□□□□ -1.49
MSL3-201ENST00000312196 NDFIP1Q9BT67 221 aa5.77□□□□□ -1.49
MSL3-201ENST00000312196 SDF2L1Q9HCN8 221 aa5.77□□□□□ -1.49
MSL3-201ENST00000312196 A0A1W2PRE2 83 aa5.77□□□□□ -1.49
MSL3-201ENST00000312196 G3V3Q6 166 aa5.77□□□□□ -1.49
MSL3-201ENST00000312196 TAAR5O14804 337 aa5.77□□□□□ -1.49
MSL3-201ENST00000312196 CXorf1O96002 111 aa5.77□□□□□ -1.49
MSL3-201ENST00000312196 OR10J4P0C629 311 aa5.77□□□□□ -1.49
MSL3-201ENST00000312196 CDC34P49427 236 aaPredicted RBP5.77□□□□□ -1.49
MSL3-201ENST00000312196 SAPCD1Q5SSQ6 148 aa5.77□□□□□ -1.49
MSL3-201ENST00000312196 MAPKAPK5-AS1Q8N8E1 139 aa5.77□□□□□ -1.49
MSL3-201ENST00000312196 OR11H4Q8NGC9 324 aa5.77□□□□□ -1.49
MSL3-201ENST00000312196 ACTR3CQ9C0K3 210 aaPredicted RBP5.77□□□□□ -1.49
MSL3-201ENST00000312196 PCLOQ9Y6V0 5065 aa5.77□□□□□ -1.49
MSL3-201ENST00000312196 C9JCJ5 164 aa5.76□□□□□ -1.49
MSL3-201ENST00000312196 NXPH4O95158 308 aa5.76□□□□□ -1.49
MSL3-201ENST00000312196 SNRPCP09234 159 aaKnown RBP5.76□□□□□ -1.49
MSL3-201ENST00000312196 GATA1P15976 413 aaPredicted RBP5.76□□□□□ -1.49
MSL3-201ENST00000312196 GCHFRP30047 84 aa5.76□□□□□ -1.49
MSL3-201ENST00000312196 C10orf126Q8N4M7 172 aa5.76□□□□□ -1.49
MSL3-201ENST00000312196 PCNPQ8WW12 178 aaKnown RBP5.76□□□□□ -1.49
MSL3-201ENST00000312196 C9orf85Q96MD7 179 aa5.76□□□□□ -1.49
MSL3-201ENST00000312196 MED28Q9H204 178 aa5.76□□□□□ -1.49
MSL3-201ENST00000312196 FHITP49789 147 aa5.76□□□□□ -1.49
MSL3-201ENST00000312196 KRTAP4-5Q9BYR2 181 aa5.76□□□□□ -1.49
MSL3-201ENST00000312196 BORCS7-ASMTA0A0B4J1R7 106 aa5.75□□□□□ -1.49
MSL3-201ENST00000312196 A0A0J9YY99 117 aa5.75□□□□□ -1.49
MSL3-201ENST00000312196 TRBV6-4A0A1B0GX49 114 aa5.75□□□□□ -1.49
MSL3-201ENST00000312196 TCRAP04437 139 aa5.75□□□□□ -1.49
MSL3-201ENST00000312196 PFN1P07737 140 aaKnown RBP5.75□□□□□ -1.49
MSL3-201ENST00000312196 ATP6V0CP27449 155 aa5.75□□□□□ -1.49
MSL3-201ENST00000312196 RAB2AP61019 212 aa5.75□□□□□ -1.49
MSL3-201ENST00000312196 ZFP2Q6ZN57 461 aa5.75□□□□□ -1.49
MSL3-201ENST00000312196 KRTAP1-5Q9BYS1 174 aa5.75□□□□□ -1.49
MSL3-201ENST00000312196 MRPL16Q9NX20 251 aaKnown RBP5.75□□□□□ -1.49
MSL3-201ENST00000312196 TRGV4A0A0C4DH28 118 aa5.75□□□□□ -1.49
MSL3-201ENST00000312196 SRIP30626 198 aa5.75□□□□□ -1.49
MSL3-201ENST00000312196 PPT1P50897 306 aa5.75□□□□□ -1.49
MSL3-201ENST00000312196 CYB561D1Q8N8Q1 229 aa5.75□□□□□ -1.49
MSL3-201ENST00000312196 Q8TAT8 98 aa5.75□□□□□ -1.49
MSL3-201ENST00000312196 TVP23CQ96ET8 276 aa5.75□□□□□ -1.49
MSL3-201ENST00000312196 TREM1Q9NP99 234 aa5.75□□□□□ -1.49
MSL3-201ENST00000312196 MDFICQ9P1T7 246 aa5.75□□□□□ -1.49
MSL3-201ENST00000312196 EPDR1Q9UM22 224 aa5.75□□□□□ -1.49
MSL3-201ENST00000312196 K7EQD1 137 aa5.74□□□□□ -1.49
MSL3-201ENST00000312196 EIF3GO75821 320 aaKnown RBP eCLIP5.74□□□□□ -1.49
MSL3-201ENST00000312196 IGLV2-11P01706 119 aa5.74□□□□□ -1.49
MSL3-201ENST00000312196 TYMSP04818 313 aa5.74□□□□□ -1.49
MSL3-201ENST00000312196 ERVFC1-1P60608 527 aa5.74□□□□□ -1.49
MSL3-201ENST00000312196 TMEM183BQ1AE95 376 aa5.74□□□□□ -1.49
MSL3-201ENST00000312196 GOLT1AQ6ZVE7 132 aa5.74□□□□□ -1.49
MSL3-201ENST00000312196 TMEM183AQ8IXX5 376 aa5.74□□□□□ -1.49
MSL3-201ENST00000312196 RAB24Q969Q5 203 aa5.74□□□□□ -1.49
MSL3-201ENST00000312196 SMIM3Q9BZL3 60 aa5.74□□□□□ -1.49
MSL3-201ENST00000312196 PSG8Q9UQ74 426 aa5.74□□□□□ -1.49
MSL3-201ENST00000312196 CTXND1A0A1B0GTU2 59 aa5.74□□□□□ -1.49
MSL3-201ENST00000312196 CXCL1P09341 107 aa5.74□□□□□ -1.49
MSL3-201ENST00000312196 ARL14EPLP0DKL9 152 aa5.74□□□□□ -1.49
MSL3-201ENST00000312196 OR4C5Q8NGB2 326 aa5.74□□□□□ -1.49
MSL3-201ENST00000312196 NTN5Q8WTR8 489 aaPredicted RBP5.74□□□□□ -1.49
MSL3-201ENST00000312196 HIST1H2BAQ96A08 127 aa5.74□□□□□ -1.49
MSL3-201ENST00000312196 C8orf49Q96NF6 230 aa5.74□□□□□ -1.49
MSL3-201ENST00000312196 LINC00694P0DN24 101 aa5.73□□□□□ -1.49
MSL3-201ENST00000312196 LINC00315P59091 139 aa5.73□□□□□ -1.49
MSL3-201ENST00000312196 FLI1Q01543 452 aaPredicted RBP5.73□□□□□ -1.49
MSL3-201ENST00000312196 LINC01556Q5JQF7 62 aa5.73□□□□□ -1.49
MSL3-201ENST00000312196 INO80EQ8NBZ0 244 aaPredicted RBP5.73□□□□□ -1.49
MSL3-201ENST00000312196 CBY1Q9Y3M2 126 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms