RNA–Protein interactions for RNA: ENST00000310397.12

SNED1-201, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SNED1, Length 8,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-201ENST00000310397 CPAMD8Q8IZJ3 1885 aa10.45□□□□□ -0.74
SNED1-201ENST00000310397 UBL5Q9BZL1 73 aa10.45□□□□□ -0.74
SNED1-201ENST00000310397 TNRC6BQ9UPQ9 1833 aaKnown RBP10.45□□□□□ -0.74
SNED1-201ENST00000310397 RHOHQ15669 191 aa10.44□□□□□ -0.74
SNED1-201ENST00000310397 BRD3OSQ6XYD6 125 aa10.44□□□□□ -0.74
SNED1-201ENST00000310397 ZNF491Q8N8L2 437 aa10.44□□□□□ -0.74
SNED1-201ENST00000310397 TRAV26-2A0A0B4J265 109 aa10.44□□□□□ -0.74
SNED1-201ENST00000310397 KRTAP27-1Q3LI81 207 aa10.44□□□□□ -0.74
SNED1-201ENST00000310397 MRPL53Q96EL3 112 aaKnown RBP10.44□□□□□ -0.74
SNED1-201ENST00000310397 PLA2G2EQ9NZK7 142 aa10.44□□□□□ -0.74
SNED1-201ENST00000310397 IGHV1OR15-1A0A075B7D0 117 aa10.44□□□□□ -0.74
SNED1-201ENST00000310397 SCRT2Q9NQ03 307 aa10.44□□□□□ -0.74
SNED1-201ENST00000310397 TDRG1Q3Y452 100 aa10.44□□□□□ -0.74
SNED1-201ENST00000310397 FOXI2Q6ZQN5 318 aa10.44□□□□□ -0.74
SNED1-201ENST00000310397 MORN5Q5VZ52 161 aa10.43□□□□□ -0.74
SNED1-201ENST00000310397 SAP30O75446 220 aa10.43□□□□□ -0.74
SNED1-201ENST00000310397 IGFL3Q6UXB1 125 aa10.43□□□□□ -0.74
SNED1-201ENST00000310397 BPESC1Q9GZL8 116 aa10.43□□□□□ -0.74
SNED1-201ENST00000310397 FAM120AOSQ5T036 256 aa10.43□□□□□ -0.74
SNED1-201ENST00000310397 TPSG1Q9NRR2 321 aa10.43□□□□□ -0.74
SNED1-201ENST00000310397 TRBV25-1A0A075B6N4 114 aa10.43□□□□□ -0.74
SNED1-201ENST00000310397 SPINK13Q1W4C9 94 aa10.43□□□□□ -0.74
SNED1-201ENST00000310397 GAGE12JA6NER3 117 aa10.43□□□□□ -0.74
SNED1-201ENST00000310397 GAGE7O76087 117 aa10.43□□□□□ -0.74
SNED1-201ENST00000310397 GAGE12FP0CL80 117 aa10.43□□□□□ -0.74
SNED1-201ENST00000310397 GAGE12GP0CL81 117 aa10.43□□□□□ -0.74
SNED1-201ENST00000310397 GAGE12IP0CL82 117 aa10.43□□□□□ -0.74
SNED1-201ENST00000310397 GAGE4Q13068 117 aa10.43□□□□□ -0.74
SNED1-201ENST00000310397 ZNF625Q96I27 306 aaPredicted RBP10.43□□□□□ -0.74
SNED1-201ENST00000310397 PCP2Q8IVA1 136 aa10.42□□□□□ -0.74
SNED1-201ENST00000310397 KLHL30-AS1Q8NEE0 82 aa10.42□□□□□ -0.74
SNED1-201ENST00000310397 EGR2P11161 476 aaPredicted RBP10.42□□□□□ -0.74
SNED1-201ENST00000310397 ANKRD29Q8N6D5 301 aa10.42□□□□□ -0.74
SNED1-201ENST00000310397 IGHV1-69DA0A0B4J2H0 117 aa10.42□□□□□ -0.74
SNED1-201ENST00000310397 ANXA2RQ3ZCQ2 193 aa10.42□□□□□ -0.74
SNED1-201ENST00000310397 LY6G6EA0A0G2JKS1 128 aa10.42□□□□□ -0.74
SNED1-201ENST00000310397 HERVK_113P63121 156 aa10.42□□□□□ -0.74
SNED1-201ENST00000310397 U3KQA8 63 aa10.42□□□□□ -0.74
SNED1-201ENST00000310397 ZFHX2Q9C0A1 2572 aaPredicted RBP10.42□□□□□ -0.74
SNED1-201ENST00000310397 AMTNQ6UX39 209 aa10.42□□□□□ -0.74
SNED1-201ENST00000310397 MSRB2Q9Y3D2 182 aa10.42□□□□□ -0.74
SNED1-201ENST00000310397 SYNJ2BPP57105 145 aa10.41□□□□□ -0.74
SNED1-201ENST00000310397 HIGD1BQ9P298 99 aa10.41□□□□□ -0.74
SNED1-201ENST00000310397 ACYP1P07311 99 aa10.41□□□□□ -0.74
SNED1-201ENST00000310397 RNF138Q8WVD3 245 aa10.41□□□□□ -0.74
SNED1-201ENST00000310397 GAGE5Q13069 117 aa10.41□□□□□ -0.74
SNED1-201ENST00000310397 GAGE6Q13070 117 aa10.41□□□□□ -0.74
SNED1-201ENST00000310397 LHBP01229 141 aa10.41□□□□□ -0.74
SNED1-201ENST00000310397 IGHV3-53P01767 116 aa10.41□□□□□ -0.74
SNED1-201ENST00000310397 TRACP01848 142 aa10.41□□□□□ -0.74
SNED1-201ENST00000310397 DEFB131AP59861 70 aa10.41□□□□□ -0.74
SNED1-201ENST00000310397 CARD19Q96LW7 228 aa10.41□□□□□ -0.74
SNED1-201ENST00000310397 TEX48A0A1B0GUV7 120 aa10.4□□□□□ -0.74
SNED1-201ENST00000310397 LY6HO94772 140 aa10.4□□□□□ -0.74
SNED1-201ENST00000310397 PRRC2AP48634 2157 aaKnown RBP10.4□□□□□ -0.74
SNED1-201ENST00000310397 PRSS29PA6NIE9 313 aa10.4□□□□□ -0.74
SNED1-201ENST00000310397 NUPR1O60356 82 aa10.4□□□□□ -0.74
SNED1-201ENST00000310397 CEACAM8P31997 349 aaPredicted RBP10.4□□□□□ -0.74
SNED1-201ENST00000310397 DUX4L9Q6RFH8 374 aaPredicted RBP10.4□□□□□ -0.74
SNED1-201ENST00000310397 LINC01356Q8N9X3 169 aa10.4□□□□□ -0.74
SNED1-201ENST00000310397 IGF2BP2-AS1Q96M15 143 aa10.4□□□□□ -0.74
SNED1-201ENST00000310397 INS-IGF2F8WCM5 200 aa10.4□□□□□ -0.75
SNED1-201ENST00000310397 EXPH5Q8NEV8 1989 aa10.39□□□□□ -0.75
SNED1-201ENST00000310397 TMEM243Q9BU79 118 aa10.39□□□□□ -0.75
SNED1-201ENST00000310397 C11orf53Q8IXP5 236 aa10.39□□□□□ -0.75
SNED1-201ENST00000310397 UNQ6494/PRO21346Q6UXR6 183 aa10.39□□□□□ -0.75
SNED1-201ENST00000310397 UBE2E2Q96LR5 201 aa10.39□□□□□ -0.75
SNED1-201ENST00000310397 LRP4O75096 1905 aa10.39□□□□□ -0.75
SNED1-201ENST00000310397 G3V318 75 aa10.39□□□□□ -0.75
SNED1-201ENST00000310397 CFC1BP0CG36 223 aa10.39□□□□□ -0.75
SNED1-201ENST00000310397 CFC1P0CG37 223 aa10.39□□□□□ -0.75
SNED1-201ENST00000310397 PRSS47A8MTI9 375 aa10.38□□□□□ -0.75
SNED1-201ENST00000310397 CDK2AP2O75956 126 aa10.38□□□□□ -0.75
SNED1-201ENST00000310397 IGHV1-69P01742 117 aa10.38□□□□□ -0.75
SNED1-201ENST00000310397 TET2Q6N021 2002 aaPredicted RBP10.38□□□□□ -0.75
SNED1-201ENST00000310397 Q6ZVH6 145 aa10.38□□□□□ -0.75
SNED1-201ENST00000310397 ASPHD1Q5U4P2 390 aa10.38□□□□□ -0.75
SNED1-201ENST00000310397 COL4A3Q01955 1670 aa10.38□□□□□ -0.75
SNED1-201ENST00000310397 F8WEM9 126 aa10.37□□□□□ -0.75
SNED1-201ENST00000310397 GP9P14770 177 aa10.37□□□□□ -0.75
SNED1-201ENST00000310397 RPL35AP18077 110 aaKnown RBP10.37□□□□□ -0.75
SNED1-201ENST00000310397 DSCR8Q96T75 97 aa10.37□□□□□ -0.75
SNED1-201ENST00000310397 H3BUA1 57 aa10.37□□□□□ -0.75
SNED1-201ENST00000310397 DYNAPQ8N1N2 210 aa10.37□□□□□ -0.75
SNED1-201ENST00000310397 C11orf44Q8N8P7 122 aa10.37□□□□□ -0.75
SNED1-201ENST00000310397 MSMBP08118 114 aa10.37□□□□□ -0.75
SNED1-201ENST00000310397 FAM167A-AS1Q96KT0 104 aa10.37□□□□□ -0.75
SNED1-201ENST00000310397 RPL32P62910 135 aaKnown RBP10.37□□□□□ -0.75
SNED1-201ENST00000310397 TEN1Q86WV5 123 aa10.37□□□□□ -0.75
SNED1-201ENST00000310397 C15orf53Q8NAA6 179 aa10.37□□□□□ -0.75
SNED1-201ENST00000310397 KLK9Q9UKQ9 250 aa10.36□□□□□ -0.75
SNED1-201ENST00000310397 C17orf77Q96MU5 243 aa10.36□□□□□ -0.75
SNED1-201ENST00000310397 IGHV7-4-1A0A0J9YVY3 117 aa10.36□□□□□ -0.75
SNED1-201ENST00000310397 IGLL5B9A064 214 aa10.35□□□□□ -0.75
SNED1-201ENST00000310397 TCTEX1D4Q5JR98 221 aa10.35□□□□□ -0.75
SNED1-201ENST00000310397 LY6DQ14210 128 aa10.35□□□□□ -0.75
SNED1-201ENST00000310397 RNASE8Q8TDE3 154 aaKnown RBP10.35□□□□□ -0.75
SNED1-201ENST00000310397 NSUN5P1Q3KNT7 163 aa10.35□□□□□ -0.75
SNED1-201ENST00000310397 DIAPH2-AS1Q14236 149 aa10.35□□□□□ -0.75
SNED1-201ENST00000310397 ADAMTS20P59510 1910 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms