RNA–Protein interactions for RNA: ENST00000310301.8

VPS41-202, Transcript of VPS41, HOPS complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS41, Length 5,903 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-202ENST00000310301 DOCK9Q9BZ29 2069 aa6.49□□□□□ -1.37
VPS41-202ENST00000310301 FAM223BA6NKX1 122 aa6.49□□□□□ -1.37
VPS41-202ENST00000310301 FAM120AOSQ5T036 256 aa6.49□□□□□ -1.37
VPS41-202ENST00000310301 FAM223AQ8IWN6 122 aa6.49□□□□□ -1.37
VPS41-202ENST00000310301 COL4A3Q01955 1670 aa6.49□□□□□ -1.37
VPS41-202ENST00000310301 FAM236AA0A1B0GUQ0 79 aa6.49□□□□□ -1.37
VPS41-202ENST00000310301 FAM236BA0A1B0GV22 79 aa6.49□□□□□ -1.37
VPS41-202ENST00000310301 hADV29S1A0JD25 119 aa6.49□□□□□ -1.37
VPS41-202ENST00000310301 ZNRD1Q9P1U0 126 aa6.49□□□□□ -1.37
VPS41-202ENST00000310301 KLK9Q9UKQ9 250 aa6.49□□□□□ -1.37
VPS41-202ENST00000310301 HIVEP2P31629 2446 aa6.49□□□□□ -1.37
VPS41-202ENST00000310301 IGHV3-38A0A0C4DH36 116 aa6.49□□□□□ -1.37
VPS41-202ENST00000310301 NUPR1O60356 82 aa6.49□□□□□ -1.37
VPS41-202ENST00000310301 WFDC2Q14508 124 aa6.49□□□□□ -1.37
VPS41-202ENST00000310301 PRR25Q96S07 402 aa6.49□□□□□ -1.37
VPS41-202ENST00000310301 PKDREJQ9NTG1 2253 aa6.48□□□□□ -1.37
VPS41-202ENST00000310301 IGHV4-30-2A0A087WSY4 118 aa6.48□□□□□ -1.37
VPS41-202ENST00000310301 A0A1B0GX51 115 aa6.48□□□□□ -1.37
VPS41-202ENST00000310301 IGHG2P01859 326 aa6.48□□□□□ -1.37
VPS41-202ENST00000310301 POLEQ07864 2286 aa6.48□□□□□ -1.37
VPS41-202ENST00000310301 ROS1P08922 2347 aa6.48□□□□□ -1.37
VPS41-202ENST00000310301 G3V4G9 280 aa6.48□□□□□ -1.37
VPS41-202ENST00000310301 IGKV1-39P01597 117 aa6.48□□□□□ -1.37
VPS41-202ENST00000310301 IGKV1D-39P04432 117 aa6.48□□□□□ -1.37
VPS41-202ENST00000310301 SAA4P35542 130 aa6.48□□□□□ -1.37
VPS41-202ENST00000310301 RNF138Q8WVD3 245 aa6.48□□□□□ -1.37
VPS41-202ENST00000310301 C11orf52Q96A22 123 aa6.48□□□□□ -1.37
VPS41-202ENST00000310301 NDUFA4L2Q9NRX3 87 aa6.48□□□□□ -1.37
VPS41-202ENST00000310301 USMG5Q96IX5 58 aa6.48□□□□□ -1.37
VPS41-202ENST00000310301 ZNF407Q9C0G0 2248 aa6.48□□□□□ -1.37
VPS41-202ENST00000310301 TRBV25-1A0A075B6N4 114 aa6.48□□□□□ -1.37
VPS41-202ENST00000310301 K7EMI3 77 aa6.48□□□□□ -1.37
VPS41-202ENST00000310301 ATOX1O00244 68 aa6.48□□□□□ -1.37
VPS41-202ENST00000310301 PRB2P02812 416 aaPredicted RBP6.47□□□□□ -1.37
VPS41-202ENST00000310301 FHL1Q13642 323 aa6.47□□□□□ -1.37
VPS41-202ENST00000310301 RNASE13Q5GAN3 156 aaKnown RBP6.47□□□□□ -1.37
VPS41-202ENST00000310301 LYPD6BQ8NI32 183 aa6.47□□□□□ -1.37
VPS41-202ENST00000310301 ATRXP46100 2492 aa6.47□□□□□ -1.37
VPS41-202ENST00000310301 PIP4P2Q8N4L2 257 aa6.47□□□□□ -1.37
VPS41-202ENST00000310301 WIPF2Q8TF74 440 aaPredicted RBP6.47□□□□□ -1.37
VPS41-202ENST00000310301 COL5A1P20908 1838 aaPredicted RBP6.47□□□□□ -1.37
VPS41-202ENST00000310301 A0A0B4J2C4 111 aa6.47□□□□□ -1.37
VPS41-202ENST00000310301 IGKV3D-7A0A0C4DH55 119 aa6.47□□□□□ -1.37
VPS41-202ENST00000310301 SPINK13Q1W4C9 94 aa6.47□□□□□ -1.37
VPS41-202ENST00000310301 COA6Q5JTJ3 125 aaKnown RBP6.47□□□□□ -1.37
VPS41-202ENST00000310301 ZNF493Q6ZR52 646 aa6.47□□□□□ -1.37
VPS41-202ENST00000310301 PYGO2Q9BRQ0 406 aa6.47□□□□□ -1.37
VPS41-202ENST00000310301 TAX1BP3O14907 124 aa6.47□□□□□ -1.37
VPS41-202ENST00000310301 DEFB130BP0DP73 79 aa6.47□□□□□ -1.37
VPS41-202ENST00000310301 DEFB130AP0DP74 79 aa6.47□□□□□ -1.37
VPS41-202ENST00000310301 CFHR3Q02985 330 aa6.47□□□□□ -1.37
VPS41-202ENST00000310301 LYPD2Q6UXB3 125 aa6.47□□□□□ -1.37
VPS41-202ENST00000310301 DAZ1Q9NQZ3 744 aaKnown RBP6.47□□□□□ -1.37
VPS41-202ENST00000310301 PTPN13Q12923 2485 aa6.47□□□□□ -1.37
VPS41-202ENST00000310301 ZNF561-AS1K7EIQ3 104 aa6.46□□□□□ -1.37
VPS41-202ENST00000310301 RHODO00212 210 aa6.46□□□□□ -1.37
VPS41-202ENST00000310301 CRYGCP07315 174 aa6.46□□□□□ -1.37
VPS41-202ENST00000310301 NKAPP1Q8N9T2 125 aa6.46□□□□□ -1.37
VPS41-202ENST00000310301 FXYD5Q96DB9 178 aa6.46□□□□□ -1.37
VPS41-202ENST00000310301 ORMDL1Q9P0S3 153 aa6.46□□□□□ -1.37
VPS41-202ENST00000310301 OBSL1O75147 1896 aa6.46□□□□□ -1.37
VPS41-202ENST00000310301 KIAA1549LQ6ZVL6 1849 aa6.46□□□□□ -1.37
VPS41-202ENST00000310301 IGHV4-61A0A0C4DH41 118 aa6.46□□□□□ -1.37
VPS41-202ENST00000310301 OVOL3O00110 214 aa6.46□□□□□ -1.37
VPS41-202ENST00000310301 EGR2P11161 476 aaPredicted RBP6.46□□□□□ -1.37
VPS41-202ENST00000310301 FOXI1Q12951 378 aa6.46□□□□□ -1.38
VPS41-202ENST00000310301 LINC00173Q6ZV60 143 aa6.46□□□□□ -1.38
VPS41-202ENST00000310301 KLHL30-AS1Q8NEE0 82 aa6.46□□□□□ -1.38
VPS41-202ENST00000310301 FAM110DQ8TAY7 271 aaPredicted RBP6.46□□□□□ -1.38
VPS41-202ENST00000310301 TMEM14CQ9P0S9 112 aa6.46□□□□□ -1.38
VPS41-202ENST00000310301 MYLKQ15746 1914 aa6.46□□□□□ -1.38
VPS41-202ENST00000310301 PRSS47A8MTI9 375 aa6.46□□□□□ -1.38
VPS41-202ENST00000310301 H3BRN7 92 aa6.46□□□□□ -1.38
VPS41-202ENST00000310301 NDUFB8O95169 186 aa6.46□□□□□ -1.38
VPS41-202ENST00000310301 LTAP01374 205 aa6.46□□□□□ -1.38
VPS41-202ENST00000310301 DEFB131AP59861 70 aa6.46□□□□□ -1.38
VPS41-202ENST00000310301 TEN1Q86WV5 123 aa6.46□□□□□ -1.38
VPS41-202ENST00000310301 ZNRF2Q8NHG8 242 aa6.46□□□□□ -1.38
VPS41-202ENST00000310301 NRGNQ92686 78 aa6.46□□□□□ -1.38
VPS41-202ENST00000310301 C20orf78Q9BR46 151 aa6.46□□□□□ -1.38
VPS41-202ENST00000310301 F6UB75 175 aa6.45□□□□□ -1.38
VPS41-202ENST00000310301 HERVK_113P63121 156 aa6.45□□□□□ -1.38
VPS41-202ENST00000310301 UBE2DNLQ8IWF7 75 aa6.45□□□□□ -1.38
VPS41-202ENST00000310301 C19orf84I3L1E1 186 aa6.45□□□□□ -1.38
VPS41-202ENST00000310301 PSCAO43653 123 aa6.45□□□□□ -1.38
VPS41-202ENST00000310301 ANKRD39Q53RE8 183 aa6.45□□□□□ -1.38
VPS41-202ENST00000310301 FER1L5A0AVI2 2057 aa6.45□□□□□ -1.38
VPS41-202ENST00000310301 IGHV1OR15-1A0A075B7D0 117 aa6.45□□□□□ -1.38
VPS41-202ENST00000310301 TEX36Q5VZQ5 186 aa6.45□□□□□ -1.38
VPS41-202ENST00000310301 BRK1Q8WUW1 75 aa6.45□□□□□ -1.38
VPS41-202ENST00000310301 CFHR4Q92496 578 aa6.45□□□□□ -1.38
VPS41-202ENST00000310301 MBD6Q96DN6 1003 aa6.45□□□□□ -1.38
VPS41-202ENST00000310301 KAAG1Q9UBP8 84 aa6.45□□□□□ -1.38
VPS41-202ENST00000310301 VPREB3Q9UKI3 123 aa6.45□□□□□ -1.38
VPS41-202ENST00000310301 THAP8Q8NA92 274 aa6.45□□□□□ -1.38
VPS41-202ENST00000310301 ZMAT4Q9H898 229 aa6.45□□□□□ -1.38
VPS41-202ENST00000310301 SEM1Q6ZVN7 128 aa6.44□□□□□ -1.38
VPS41-202ENST00000310301 WFDC9Q8NEX5 89 aa6.44□□□□□ -1.38
VPS41-202ENST00000310301 TRAV12-2A0A075B6T6 113 aa6.44□□□□□ -1.38
VPS41-202ENST00000310301 C1orf147Q96MC9 270 aaPredicted RBP6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms