RNA–Protein interactions for RNA: ENST00000309641.10

PDE4D-201, Transcript of phosphodiesterase 4D, humanhuman

TSL 1 (best)

Gene PDE4D, Length 2,025 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-201ENST00000309641 SH2D1AO60880 128 aa6.46□□□□□ -1.38
PDE4D-201ENST00000309641 IGLV2-8P01709 118 aa6.46□□□□□ -1.38
PDE4D-201ENST00000309641 SPART-AS1P0CW21 52 aa6.46□□□□□ -1.38
PDE4D-201ENST00000309641 DEFB130BP0DP73 79 aa6.46□□□□□ -1.38
PDE4D-201ENST00000309641 DEFB130AP0DP74 79 aa6.46□□□□□ -1.38
PDE4D-201ENST00000309641 TDRG1Q3Y452 100 aa6.46□□□□□ -1.38
PDE4D-201ENST00000309641 CENPWQ5EE01 88 aa6.46□□□□□ -1.38
PDE4D-201ENST00000309641 FAM159AQ6UWV7 190 aa6.46□□□□□ -1.38
PDE4D-201ENST00000309641 ZNF493Q6ZR52 646 aa6.46□□□□□ -1.38
PDE4D-201ENST00000309641 PHLDA1Q8WV24 401 aaPredicted RBP6.46□□□□□ -1.38
PDE4D-201ENST00000309641 EIF5A2Q9GZV4 153 aaKnown RBP6.46□□□□□ -1.38
PDE4D-201ENST00000309641 M0R036 132 aa6.45□□□□□ -1.38
PDE4D-201ENST00000309641 TYMSP04818 313 aa6.45□□□□□ -1.38
PDE4D-201ENST00000309641 Q6ZTI0 123 aa6.45□□□□□ -1.38
PDE4D-201ENST00000309641 FABP5P3A8MUU1 101 aa6.45□□□□□ -1.38
PDE4D-201ENST00000309641 SNURFLB1AK76 121 aa6.45□□□□□ -1.38
PDE4D-201ENST00000309641 TAGLN2P37802 199 aaKnown RBP6.45□□□□□ -1.38
PDE4D-201ENST00000309641 CEBPGP53567 150 aa6.45□□□□□ -1.38
PDE4D-201ENST00000309641 TCL1AP56279 114 aa6.45□□□□□ -1.38
PDE4D-201ENST00000309641 ZNF674Q2M3X9 581 aa6.45□□□□□ -1.38
PDE4D-201ENST00000309641 PRR27Q6MZM9 219 aa6.45□□□□□ -1.38
PDE4D-201ENST00000309641 PARLQ9H300 379 aa6.45□□□□□ -1.38
PDE4D-201ENST00000309641 PLECQ15149 4684 aaKnown RBP6.44□□□□□ -1.38
PDE4D-201ENST00000309641 LYSTQ99698 3801 aa6.44□□□□□ -1.38
PDE4D-201ENST00000309641 IGHV3-16A0A0C4DH30 117 aa6.44□□□□□ -1.38
PDE4D-201ENST00000309641 GAGE12BA1L429 117 aa6.44□□□□□ -1.38
PDE4D-201ENST00000309641 LYRM9A8MSI8 78 aa6.44□□□□□ -1.38
PDE4D-201ENST00000309641 GAGE7O76087 117 aa6.44□□□□□ -1.38
PDE4D-201ENST00000309641 S100A9P06702 114 aaKnown RBP6.44□□□□□ -1.38
PDE4D-201ENST00000309641 GAGE12FP0CL80 117 aa6.44□□□□□ -1.38
PDE4D-201ENST00000309641 GAGE12GP0CL81 117 aa6.44□□□□□ -1.38
PDE4D-201ENST00000309641 GAGE12IP0CL82 117 aa6.44□□□□□ -1.38
PDE4D-201ENST00000309641 DAD1P61803 113 aa6.44□□□□□ -1.38
PDE4D-201ENST00000309641 RPL19P84098 196 aaKnown RBP6.44□□□□□ -1.38
PDE4D-201ENST00000309641 DAZ2Q13117 558 aaKnown RBP6.44□□□□□ -1.38
PDE4D-201ENST00000309641 IBA57Q5T440 356 aaKnown RBP6.44□□□□□ -1.38
PDE4D-201ENST00000309641 MRPL16Q9NX20 251 aaKnown RBP6.44□□□□□ -1.38
PDE4D-201ENST00000309641 MUC4Q99102 2169 aa6.44□□□□□ -1.38
PDE4D-201ENST00000309641 TMSB15BA0A087X1C1 80 aa6.43□□□□□ -1.38
PDE4D-201ENST00000309641 C3orf84H3BNL1 204 aa6.43□□□□□ -1.38
PDE4D-201ENST00000309641 ORM1P02763 201 aa6.43□□□□□ -1.38
PDE4D-201ENST00000309641 SRP19P09132 144 aaKnown RBP6.43□□□□□ -1.38
PDE4D-201ENST00000309641 HTN3P15516 51 aa6.43□□□□□ -1.38
PDE4D-201ENST00000309641 OR5I1Q13606 314 aa6.43□□□□□ -1.38
PDE4D-201ENST00000309641 FAM162BQ5T6X4 162 aa6.43□□□□□ -1.38
PDE4D-201ENST00000309641 SDF2L1Q9HCN8 221 aa6.43□□□□□ -1.38
PDE4D-201ENST00000309641 KMT2CQ8NEZ4 4911 aaKnown RBP6.43□□□□□ -1.38
PDE4D-201ENST00000309641 TRGV1A0A0A0MS02 117 aa6.43□□□□□ -1.38
PDE4D-201ENST00000309641 GRIFINA4D1Z8 144 aa6.43□□□□□ -1.38
PDE4D-201ENST00000309641 KRBOX1C9JBD0 128 aa6.43□□□□□ -1.38
PDE4D-201ENST00000309641 TMEM250H0YL14 139 aa6.43□□□□□ -1.38
PDE4D-201ENST00000309641 MGST1P10620 155 aaKnown RBP6.43□□□□□ -1.38
PDE4D-201ENST00000309641 RNASE3P12724 160 aaKnown RBP6.43□□□□□ -1.38
PDE4D-201ENST00000309641 GNG4P50150 75 aa6.43□□□□□ -1.38
PDE4D-201ENST00000309641 ZNF415Q09FC8 603 aa6.43□□□□□ -1.38
PDE4D-201ENST00000309641 CEMP1Q6PRD7 247 aaPredicted RBP6.43□□□□□ -1.38
PDE4D-201ENST00000309641 LINC00612Q8N6U2 182 aa6.43□□□□□ -1.38
PDE4D-201ENST00000309641 DYNC2H1Q8NCM8 4307 aaKnown RBP6.43□□□□□ -1.38
PDE4D-201ENST00000309641 TRGV11A0A075B6L2 103 aa6.42□□□□□ -1.38
PDE4D-201ENST00000309641 DEFB131BA0A096LNP1 70 aa6.42□□□□□ -1.38
PDE4D-201ENST00000309641 B4DEV8 164 aa6.42□□□□□ -1.38
PDE4D-201ENST00000309641 K7EN84 100 aa6.42□□□□□ -1.38
PDE4D-201ENST00000309641 SPINK4O60575 86 aa6.42□□□□□ -1.38
PDE4D-201ENST00000309641 OCC1Q8TAD7 63 aa6.42□□□□□ -1.38
PDE4D-201ENST00000309641 KCNS1Q96KK3 526 aa6.42□□□□□ -1.38
PDE4D-201ENST00000309641 TRAV10A0A0B4J240 114 aa6.41□□□□□ -1.38
PDE4D-201ENST00000309641 TEX48A0A1B0GUV7 120 aa6.41□□□□□ -1.38
PDE4D-201ENST00000309641 IGHV3-53P01767 116 aa6.41□□□□□ -1.38
PDE4D-201ENST00000309641 RAB14P61106 215 aa6.41□□□□□ -1.38
PDE4D-201ENST00000309641 LINC01559Q495D7 138 aa6.41□□□□□ -1.38
PDE4D-201ENST00000309641 CLLU1Q5K131 121 aa6.41□□□□□ -1.38
PDE4D-201ENST00000309641 POM121L12Q8N7R1 296 aa6.41□□□□□ -1.38
PDE4D-201ENST00000309641 C9orf85Q96MD7 179 aa6.41□□□□□ -1.38
PDE4D-201ENST00000309641 C19orf71A6NCJ1 209 aa6.4□□□□□ -1.38
PDE4D-201ENST00000309641 NUPR2A6NF83 97 aa6.4□□□□□ -1.38
PDE4D-201ENST00000309641 IGLL5B9A064 214 aa6.4□□□□□ -1.38
PDE4D-201ENST00000309641 C9JCJ5 164 aa6.4□□□□□ -1.38
PDE4D-201ENST00000309641 H3BVH4 76 aa6.4□□□□□ -1.38
PDE4D-201ENST00000309641 HOXA5P20719 270 aa6.4□□□□□ -1.38
PDE4D-201ENST00000309641 SMIM7Q9BQ49 75 aa6.4□□□□□ -1.38
PDE4D-201ENST00000309641 TRGV2A0A075B6R0 118 aa6.4□□□□□ -1.39
PDE4D-201ENST00000309641 SFTA3P0C7M3 94 aa6.4□□□□□ -1.39
PDE4D-201ENST00000309641 ARMS2P0C7Q2 107 aa6.4□□□□□ -1.39
PDE4D-201ENST00000309641 GZMBP10144 247 aa6.4□□□□□ -1.39
PDE4D-201ENST00000309641 RASL10AQ92737 203 aa6.4□□□□□ -1.39
PDE4D-201ENST00000309641 SPXQ9BT56 116 aa6.4□□□□□ -1.39
PDE4D-201ENST00000309641 RNASE7Q9H1E1 156 aaKnown RBP6.4□□□□□ -1.39
PDE4D-201ENST00000309641 NACAE9PAV3 2078 aa6.4□□□□□ -1.39
PDE4D-201ENST00000309641 MUC21A0A0G2JKD1 596 aa6.39□□□□□ -1.39
PDE4D-201ENST00000309641 MUC21A0A140T8X8 626 aa6.39□□□□□ -1.39
PDE4D-201ENST00000309641 ZNF727A8MUV8 499 aa6.39□□□□□ -1.39
PDE4D-201ENST00000309641 F5H768 121 aa6.39□□□□□ -1.39
PDE4D-201ENST00000309641 M0R2P5 195 aa6.39□□□□□ -1.39
PDE4D-201ENST00000309641 ATP5G1P05496 136 aa6.39□□□□□ -1.39
PDE4D-201ENST00000309641 S100A4P26447 101 aaKnown RBP6.39□□□□□ -1.39
PDE4D-201ENST00000309641 ASIPP42127 132 aa6.39□□□□□ -1.39
PDE4D-201ENST00000309641 LGALS9BQ3B8N2 356 aa6.39□□□□□ -1.39
PDE4D-201ENST00000309641 SMIM12Q96EX1 92 aa6.39□□□□□ -1.39
PDE4D-201ENST00000309641 ZNF479Q96JC4 524 aa6.39□□□□□ -1.39
PDE4D-201ENST00000309641 IGHV4-4A0A075B6R2 117 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 97.5 ms